DN621641

Overview
NameDN621641
Unique NameDN621641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2889 contig Csv1_Contig2889:73..761. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_BACAA (Chaperone protein dnaK OS=Bacillus anthracis (strain A0248) GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12
Identity = 44/131 (33.59%), Postives = 72/131 (54.96%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 688
            ANGI+NV A+D  T ++  ITI +  G LS +E+E+MVQEAE     D++ K++VE +N  +   +     VKD  +  K+D A+  K  +A +     ++ N+L   +E   K   L+ I   +  K+Y+
Sbjct:  450 ANGIVNVRAKDLGTSKEQAITIQSSSG-LSDEEVERMVQEAEANADADQKRKEEVELRNEADQLVFQTDKVVKD--LEGKVDAAEVAKATEAKEALQAAIEKNEL---EEIRAKKDALQEIVQQLTVKLYE 574          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_AGRT5 (Chaperone protein dnaK OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dnaK PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12
Identity = 46/131 (35.11%), Postives = 76/131 (58.02%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 688
            ANGI+ VSA+DK TG++ +I I    G LS  +IEKMV++AE     D++ +  VEAKN  E+  ++   +VK+   G K+   D+K IEDAI      +++ +  +AD+ + K + L  +   +   +Y+
Sbjct:  475 ANGIVQVSAKDKGTGKEQQIRI-QASGGLSDADIEKMVKDAEANAEADKKRRAGVEAKNQAESLIHSTEKSVKE--YGDKVSETDRKAIEDAIASLKTAVEAAE-PDADDIQAKTQTLMEVSMKLGQAIYE 601          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_AERHH (Chaperone protein dnaK OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12
Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = -2
Query:  404 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQ 688
            ANGIL+VSA+DK T ++ KITI    G LS DEIE+MV+EAE   AED++ ++ V+ +N  +   +++R  + +   G  L   DK KIE A+ +
Sbjct:  480 ANGILHVSAKDKETNKEQKITIQASSG-LSDDEIERMVREAEANAAEDKKFEELVQTRNQADGLVHSVRKQITE--AGEALPADDKTKIEAALSE 571          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNY3 (Chaperone protein dnaK2 OS=Synechocystis sp. (strain PCC 6803) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12
Identity = 45/133 (33.83%), Postives = 73/133 (54.89%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADE--FEDKMKELESICNPIIAKMYQ 688
            ANGILNV+A+D+ TG++  I+IT     L   E+++MV+EAE   A D+E ++K++ KN  ++  Y     + +  +G K+  ADK K E  I           +A+ D+   +  M EL+ +   I + MYQ
Sbjct:  475 ANGILNVTAKDRGTGKEQSISITG-ASTLPDTEVDRMVKEAESNAAADKERREKIDRKNQADSLVYQAEKQITE--LGDKVPAADKIKAEGLIKDL-----KEAVAQEDDAKIQTVMPELQQVLYSIGSNMYQ 599          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_VIBHA (Chaperone protein dnaK OS=Vibrio harveyi GN=dnaK PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 43/95 (45.26%), Postives = 60/95 (63.16%), Query Frame = -2
Query:  404 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQ 688
            A+GIL+VSA+DK TG++ KITI    G LS D+IEKMVQEAE  K  D++ ++   A+N  +   +  R  V  E+ G  L   +K+KIE AI +
Sbjct:  481 ADGILHVSAKDKQTGKEQKITI-QASGGLSDDDIEKMVQEAEANKEADKKFEELATARNQADQMIHGTRKQV--EEAGEALPAEEKEKIEAAISE 572          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_RALPJ (Chaperone protein dnaK OS=Ralstonia pickettii (strain 12J) GN=dnaK PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = -2
Query:  362 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEAD 688
            ANGIL+V A+DK TG++NKITI    G LS+ EIE+MV++AE    ED++ ++ V+++N  E   ++ +  + +   G KL+  +K KIE AI +  + L     A  D
Sbjct:  481 ANGILHVGAKDKATGKENKITIKASSG-LSEAEIERMVKDAEANAEEDKKLRELVDSRNQGEALVHSTKKALGE--YGDKLEAGEKDKIEAAIKELEETLKGTDKAAID 586          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_LEGPL (Chaperone protein dnaK OS=Legionella pneumophila (strain Lens) GN=dnaK PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 45/133 (33.83%), Postives = 75/133 (56.39%), Query Frame = -2
Query:  299 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAID---QAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 688
            ANGILNVSA+DK TG+   I I    G LS++E+  MV++A+ +  ED++ K+  E +N  ++  ++   ++KD  +  +L   +KK IE AI    +A+Q  D  ++      EDK+K L      +  ++Y
Sbjct:  480 ANGILNVSAKDKATGKAQSIVIKASSG-LSEEEVAAMVKDAQSHAEEDKKFKEMAELRNQADSLIHSCEKSMKD--LADELSEDEKKGIETAISELKEAVQGTDKARI------EDKLKVLTDASAKMAERIY 603          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_LEGPC (Chaperone protein dnaK OS=Legionella pneumophila (strain Corby) GN=dnaK PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 45/133 (33.83%), Postives = 75/133 (56.39%), Query Frame = -2
Query:  299 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAID---QAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 688
            ANGILNVSA+DK TG+   I I    G LS++E+  MV++A+ +  ED++ K+  E +N  ++  ++   ++KD  +  +L   +KK IE AI    +A+Q  D  ++      EDK+K L      +  ++Y
Sbjct:  480 ANGILNVSAKDKATGKAQSIVIKASSG-LSEEEVAAMVKDAQSHAEEDKKFKEMAELRNQADSLIHSCEKSMKD--LADELSEDEKKGIETAISELKEAVQGTDKARI------EDKLKVLTDASAKMAERIY 603          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_IDILO (Chaperone protein dnaK OS=Idiomarina loihiensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 39/98 (39.80%), Postives = 63/98 (64.29%), Query Frame = -2
Query:  395 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQ 688
            A+GIL+VSA+DK TG++ KITI    G L + E++KMV++AE +  ED++ ++ V+A+N  +   +  RN +K+  +G  L   DK  IE A ++  Q
Sbjct:  480 ADGILHVSAKDKDTGKEQKITIKASSG-LDESEVDKMVKDAEAHAEEDKKFEEMVQARNQADGLVHATRNQLKE--VGDALSQEDKDAIEKACEELEQ 574          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_DEIRA (Chaperone protein dnaK OS=Deinococcus radiodurans GN=dnaK PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 4.329e-12
Identity = 40/111 (36.04%), Postives = 74/111 (66.67%), Query Frame = -2
Query:  359 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADK-KKIEDAIDQAIQWLDSNQLAEADE 688
            ANGIL+V+A++KT+G+++ ITI N    L K ++E+MVQEAE+  A D++ K+KVE +N L++        +++++ G+  D  D+ K   D  ++A++  D +++A+A +
Sbjct:  476 ANGILHVTAKEKTSGKESSITIENTT-TLDKTDVERMVQEAEQNAAADKQRKEKVEKRNNLDSLRVQAVQQLEEQE-GAAQDAKDRLKAAADEAEEAVRSEDDSKIADAQK 584          
The following BLAST results are available for this feature:
BLAST of DN621641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BACAA3.315e-1233.59Chaperone protein dnaK OS=Bacillus anthracis (stra... [more]
DNAK_AGRT53.315e-1235.11Chaperone protein dnaK OS=Agrobacterium tumefacien... [more]
DNAK_AERHH3.315e-1243.16Chaperone protein dnaK OS=Aeromonas hydrophila sub... [more]
DNAK2_SYNY33.315e-1233.83Chaperone protein dnaK2 OS=Synechocystis sp. (stra... [more]
DNAK_VIBHA4.329e-1245.26Chaperone protein dnaK OS=Vibrio harveyi GN=dnaK P... [more]
DNAK_RALPJ4.329e-1239.45Chaperone protein dnaK OS=Ralstonia pickettii (str... [more]
DNAK_LEGPL4.329e-1233.83Chaperone protein dnaK OS=Legionella pneumophila (... [more]
DNAK_LEGPC4.329e-1233.83Chaperone protein dnaK OS=Legionella pneumophila (... [more]
DNAK_IDILO4.329e-1239.80Chaperone protein dnaK OS=Idiomarina loihiensis GN... [more]
DNAK_DEIRA4.329e-1236.04Chaperone protein dnaK OS=Deinococcus radiodurans ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621641 ID=DN621641; Name=DN621641; organism=Citrus sinensis; type=EST; length=689bp
TTTTTTTTTTTTTTTTAGGGACTGAAAAATATTCATTATATAAATTGGGT
CCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATTAATA
TTCATCCTAAGGCTAAAGCAACATAAGATAAAAACCAAACGTCCAGTTTT
CCCACCGTCAAAAAACCGACCTCCCACAAACACAGCAAAATAAACTGGAA
GCTTAGTCAACTTCCTCAATCTTGGGACCGGCGGCACTGCCACCAGCTGG
AGGAGTATCATCATCCATGTCACCGCCCATATCACCACCAGCACCTTGAT
ACATCTTGGCAATGATGGGATTGCAGATGCTCTCAAGCTCCTTCATCTTG
TCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATTGAAT
TGCCTGGTCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCAAGTT
TGGAGCCGATCTTCTCGTCCTTGACAGTGTTCCTCATATTGTAGGCATAG
TTTTCCAAGGCATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCATCTTC
AGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCCTTTG
ACAATCTACCCTTGTCGTTGGTGATTGTGATCTTGTTCTTTTGGCCGGTT
GTCTTATCTTCTGCTGAGACATTCAAGATACCGTTAGCA
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