DN621619

Overview
NameDN621619
Unique NameDN621619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN621619 vs. ExPASy Swiss-Prot
Match: ACT11_ARATH (Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.261e-55
Identity = 103/109 (94.50%), Postives = 108/109 (99.08%), Query Frame = -2 
Query:  354 IGMESDGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 680
            +GME+ GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  269 VGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of DN621619 vs. ExPASy Swiss-Prot
Match: ACT3_SOLTU (Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.871e-55
Identity = 103/109 (94.50%), Postives = 108/109 (99.08%), Query Frame = -2 
Query:  354 IGMESDGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 680
            IGME+ GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKE++ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  269 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKELTALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of DN621619 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSJ (Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 8.974e-55
Identity = 103/109 (94.50%), Postives = 107/109 (98.17%), Query Frame = -2 
Query:  354 IGMESDGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 680
            IGME+ GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  269 IGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 377
[Close]
BLAST of DN621619 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSI (Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 8.974e-55
Identity = 103/109 (94.50%), Postives = 107/109 (98.17%), Query Frame = -2 
Query:  354 IGMESDGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 680
            IGME+ GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  269 IGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 377
[Close]
BLAST of DN621619 vs. ExPASy Swiss-Prot
Match: ACT1_TOBAC (Actin OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 8.974e-55
Identity = 104/109 (95.41%), Postives = 107/109 (98.17%), Query Frame = -2 
Query:  354 IGMESDGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 680
            IGME+ GIHETTYNSIMKCDVDIRKDLYG IVLSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  269 IGMEAAGIHETTYNSIMKCDVDIRKDLYGKIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of DN621619 vs. ExPASy Swiss-Prot
Match: ACT6_SOLTU (Actin-71 OS=Solanum tuberosum GN=AC71 PE=3 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 1.531e-54
Identity = 104/109 (95.41%), Postives = 106/109 (97.25%), Query Frame = -2 
Query:  354 IGMESDGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 680
            IGME+ GIHETTYNSIMKCDVDIRKDLYGN VLSGGSTMFPGIADRMSKEI ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  269 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNHVLSGGSTMFPGIADRMSKEIQALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of DN621619 vs. ExPASy Swiss-Prot
Match: ACT13_SOLTU (Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.999e-54
Identity = 102/109 (93.58%), Postives = 106/109 (97.25%), Query Frame = -2 
Query:  354 IGMESDGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 680
            +GME+ GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI K EYDESGPSIVHRKCF
Sbjct:  269 VGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKGEYDESGPSIVHRKCF 377
[Close]
BLAST of DN621619 vs. ExPASy Swiss-Prot
Match: ACT12_SOLTU (Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.999e-54
Identity = 102/109 (93.58%), Postives = 106/109 (97.25%), Query Frame = -2 
Query:  354 IGMESDGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 680
            +GME+ GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI K EYDESGPSIVHRKCF
Sbjct:  249 VGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKGEYDESGPSIVHRKCF 357
[Close]
BLAST of DN621619 vs. ExPASy Swiss-Prot
Match: ACT_MESVI (Actin OS=Mesostigma viride PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.410e-54
Identity = 103/109 (94.50%), Postives = 106/109 (97.25%), Query Frame = -2 
Query:  354 IGMESDGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 680
            +GMES GIHETTYNSIM+CDVDIRKDLYGNIVLSGGSTM PGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQ MWIAKSEYDESGPSIVHRKCF
Sbjct:  269 VGMESAGIHETTYNSIMRCDVDIRKDLYGNIVLSGGSTMXPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQAMWIAKSEYDESGPSIVHRKCF 377
[Close]
BLAST of DN621619 vs. ExPASy Swiss-Prot
Match: ACT1_PEA (Actin-1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.410e-54
Identity = 102/109 (93.58%), Postives = 107/109 (98.17%), Query Frame = -2 
Query:  354 IGMESDGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 680
            IGME+ GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K+EYDE GPSIVHRKCF
Sbjct:  268 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDERGPSIVHRKCF 376
The following BLAST results are available for this feature:
BLAST of DN621619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 456
Match NameE-valueIdentityDescription
ACT11_ARATH5.261e-5594.50Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=... [more]
ACT3_SOLTU6.871e-5594.50Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1[more]
ACT3_ORYSJ8.974e-5594.50Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE... [more]
ACT3_ORYSI8.974e-5594.50Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2... [more]
ACT1_TOBAC8.974e-5595.41Actin OS=Nicotiana tabacum PE=3 SV=1[more]
ACT6_SOLTU1.531e-5495.41Actin-71 OS=Solanum tuberosum GN=AC71 PE=3 SV=2[more]
ACT13_SOLTU1.999e-5493.58Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1[more]
ACT12_SOLTU1.999e-5493.58Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100... [more]
ACT_MESVI3.410e-5494.50Actin OS=Mesostigma viride PE=3 SV=1[more]
ACT1_PEA3.410e-5493.58Actin-1 OS=Pisum sativum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P10_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621619 ID=DN621619; Name=DN621619; organism=Citrus sinensis; type=EST; length=681bp
CACAAATATTATTCATTTTAAAGAGAAACACTACTTATCCGTAAATAGAG
TAGAGCTTCAATAAAGTAAACAGTTTGAAAAAAAAAAAAGGAATAAAAAG
ACAGAATTAACATTTCCCACAATATTGGATGGGTAACAATTTATCACTAC
TGAGAAAAAGGGATAAAAATTTGGAAATAGTACAGCAACGATTATGTTCT
TTCCAGGTTGTTGTCCACACGTTGAAATGAAGAATGCCAAGGCAATAAAA
TGAATGAAAATGCAAGCAGCATTTTGGTTTTAAAATAGAAAATGCAAGCA
GCATTTTGGTTTTAAAATAGCACCATGCTCCAGTCCATATTTGCTCCTGA
TCAGAAGCATTTCCTGTGCACTATTGAAGGGCCAGACTCATCATACTCAG
ATTTGGCAATCCACATTTGCTGGAAAGTGCTGAGGGATGCCAAAATGGAT
CCTCCTATCCAGACACTATATTTCCTCTCGGGAGGAGCAACCACCTTAAT
CTTCATGCTGCTTGGTGCTAATGCACTGATTTCTTTGCTCATTCTATCAG
CAATACCAGGGAACATGGTGGAACCGCCACTAAGTACAATGTTCCCATAC
AGATCCTTCCTAATATCAACATCACATTTCATTATGGAGTTGTAAGTTGT
TTCATGAATACCATCAGACTCCATACCGATC
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