DN621611

Overview
NameDN621611
Unique NameDN621611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CDPKW_ARATH (Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.213e-12
Identity = 41/110 (37.27%), Postives = 69/110 (62.73%), Query Frame = -2
Query:  389 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 715
            + LG    + +LQ +++  D D +G +D  EF+ +    ++   ++E LK+AF  FD++ NG+I   ELR  +++ LG   ++E VD +IR+ D D DG+I+YEEFV +M
Sbjct:  394 QKLGHAIPQDDLQILMDAGDIDRDGYLDCDEFIAISVH-LRKMGNDEHLKKAFAFFDQNNNGYIEIEELREALSDELGT--SEEVVDAIIRDVDTDKDGRISYEEFVTMM 500          
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CANB2_MOUSE (Calcineurin subunit B type 2 OS=Mus musculus GN=Ppp3r2 PE=2 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.213e-12
Identity = 44/112 (39.29%), Postives = 64/112 (57.14%), Query Frame = -2
Query:  389 LGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 709
            L QNP    + D+    D DGNG +DF EF+   ++     D E++L+ AFR++D D +GFIS  EL  V+      NL +    + VD+ I   D DGDG+I++EEF  V+
Sbjct:   49 LQQNPLVGRVIDIF---DTDGNGEVDFHEFIVGTSQFSVKGDEEQKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDWQLQQLVDKSILVLDKDGDGRISFEEFSDVV 157          
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CANB2_RAT (Calcineurin subunit B type 2 OS=Rattus norvegicus GN=Ppp3r2 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.584e-12
Identity = 44/112 (39.29%), Postives = 64/112 (57.14%), Query Frame = -2
Query:  389 LGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 709
            L QNP    + D+    D DGNG +DF EF+   ++     D E++L+ AFR++D D +GFIS  EL  V+      NL +    + VD+ I   D DGDG+I++EEF  V+
Sbjct:   49 LQQNPLVGRVIDIF---DTDGNGEVDFREFIVGTSQFSVKGDEEQKLRFAFRIYDMDNDGFISNGELFQVLKMMVGNNLKDWQLQQLVDKSILVLDKDGDGRISFEEFRDVV 157          
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CML33_ARATH (Probable calcium-binding protein CML33 OS=Arabidopsis thaliana GN=CML33 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 41/98 (41.84%), Postives = 64/98 (65.31%), Query Frame = -2
Query:  410 PTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT--DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 697
            P+E +L +M  ++D +G+G +D  +F + M +  + +  D E+ELK+AF+++D + +G ISA EL  VMT LGEK T E    M++  DVDGDG I +
Sbjct:   38 PSE-KLVEMFIQLDTNGDGQVDAAKFASCMDQTAQSSGGDVEKELKDAFKLYDINCDGKISANELHVVMTRLGEKCTVESCVGMVQAIDVDGDGYIRF 134          
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: SPE2A_STRPU (Calcium-binding protein SPEC 2A OS=Strongylocentrotus purpuratus GN=SPEC2A PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12
Identity = 41/110 (37.27%), Postives = 69/110 (62.73%), Query Frame = -2
Query:  389 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK-LTDEEVDEMIREADVDGDGQINYEEFVKVM 715
            +S+  + T+ ++ +M+  VD DG+  +DF EFL   A + +    E +L +AF   DKD NG +S  ELR  M+   +  +T++E+D +I +AD +GDG+I  EEF+K++
Sbjct:   40 KSIEIDLTQEKIDEMMGMVDKDGSKDMDFSEFLMRKAEQWRGR--EVQLTKAFVDLDKDHNGSLSPQELRTAMSACTDPPMTEKEIDAIIEKADCNGDGKICLEEFMKLI 147          
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CANB2_DROME (Calcineurin subunit B type 2 OS=Drosophila melanogaster GN=CanB2 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12
Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = -2
Query:  389 LGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 709
            L QNP    +Q +I+  DADGNG +DF EF+  +++     D   +L+ AFR++D D +G+IS  EL  V+      NL +    + VD+ I  AD D DG+I+++EF  V+
Sbjct:   49 LQQNPL---VQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIGFADKDEDGKISFDEFCSVV 157          
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CDPKD_ARATH (Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = -2
Query:  389 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 715
            R       E+E+Q +I  VD  G GT+D+ EF+ +     K   ++E L++AF  FDKD NG+I   EL   +   G     +  +++ +E D D DG+I+YEEF  +M
Sbjct:  385 RDFSTQLAESEVQMLIEAVDTKGKGTLDYGEFVAVSLHLQK-VANDEHLRKAFSYFDKDGNGYILPQELCDALKEDGGDDCVDVANDIFQEVDTDKDGRISYEEFAAMM 492          
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CML41_ARATH (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana GN=CML41 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 39/113 (34.51%), Postives = 69/113 (61.06%), Query Frame = -2
Query:  389 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK----MKDTDSEEELKEAFRVFDKDQ-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 712
            S+G+  +    Q+ INEVD D +G++ F +F+ LM R+      + D + ELK AF +F+ ++ +G I+   L+ ++  LGE  T  E + MI+  D+DG+G +++ EF ++M
Sbjct:   91 SVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLMTRRDLYGDGEVDGDGELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMIKFYDIDGNGILDFHEFRQMM 203          
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CDPKA_ARATH (Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 43/113 (38.05%), Postives = 67/113 (59.29%), Query Frame = -2
Query:  383 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEV-DEMIREADVDGDGQINYEEFVKVMMA 715
            + +G    E E++ ++   D DGNG +D+ EF+ ++    K  +++E  K AF  FDKD + +I   ELR  + + LGE   D  V  +++RE D D DG+INY+EFV +M A
Sbjct:  394 QKVGSQLGEPEIKMLMEVADVDGNGFLDYGEFVAVIIHLQK-IENDELFKLAFMFFDKDGSTYIELDELREALADELGEP--DASVLSDIMREVDTDKDGRINYDEFVTMMKA 503          
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CANB1_DROME (Calcineurin subunit B type 1 OS=Drosophila melanogaster GN=CanB PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = -2
Query:  389 LGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 709
            L QNP    +Q +I+  DADGNG +DF EF+  +++     D   +L+ AFR++D D +G+IS  EL  V+      NL +    + VD+ I  AD D DG+I+++EF  V+
Sbjct:   49 LQQNPL---VQRVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTICFADKDEDGKISFDEFCSVV 157          
The following BLAST results are available for this feature:
BLAST of DN621611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 392
Match NameE-valueIdentityDescription
CDPKW_ARATH1.213e-1237.27Calcium-dependent protein kinase 32 OS=Arabidopsis... [more]
CANB2_MOUSE1.213e-1239.29Calcineurin subunit B type 2 OS=Mus musculus GN=Pp... [more]
CANB2_RAT1.584e-1239.29Calcineurin subunit B type 2 OS=Rattus norvegicus ... [more]
CML33_ARATH2.069e-1241.84Probable calcium-binding protein CML33 OS=Arabidop... [more]
SPE2A_STRPU2.702e-1237.27Calcium-binding protein SPEC 2A OS=Strongylocentro... [more]
CANB2_DROME2.702e-1238.39Calcineurin subunit B type 2 OS=Drosophila melanog... [more]
CDPKD_ARATH3.529e-1235.78Calcium-dependent protein kinase 13 OS=Arabidopsis... [more]
CML41_ARATH4.609e-1234.51Probable calcium-binding protein CML41 OS=Arabidop... [more]
CDPKA_ARATH4.609e-1238.05Calcium-dependent protein kinase 10 OS=Arabidopsis... [more]
CANB1_DROME4.609e-1238.39Calcineurin subunit B type 1 OS=Drosophila melanog... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06P06_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621611 ID=DN621611; Name=DN621611; organism=Citrus sinensis; type=EST; length=716bp
ACCAAAGAAATAAAATTATATGGCCAAGAAACCTAAGCTGATAGCCTGAT
ACATAAAATAGGATACATATTTCGACCAAAAGAAAAATAAACATCGCAAG
GGCAGAAATTAATGAAACACATTAAACAGACAACAACATTCATAGAACAG
CAGAACAACTAAAATAATAAAAACCGAAAAGTTTTTCGAGTCACAAGACA
TATTGACGAGGGAGACAACATTCTTCCTACACCATCAGGCCCATCACCAT
TAAAAGACCATTGCTTCCTTTAGCCTGACCCTCATGACTATCAAATTAAA
AATTGTAAAAGAGAAAACTAGGAATCCCTTTATAATTTAGTCAACCCATT
TTATAAGTATTGGTGGGTTGGGGTCATTACTTGGCCATCATAACCTTGAC
AAATTCCTCATAATTTATCTGGCCATCACCATCAACATCAGCTTCCCTTA
TCATCTCATCAACTTCTTCATCAGTAAGTTTCTCTCCTAGGTTTGTCATC
ACATGGCGCAGCTCAGCAGCTGAGATGAAACCATTCTGATCCTTGTCGAA
AACCCGGAAGGCCTCTTTCAGCTCCTCCTCAGAGTCGGTATCCTTCATCT
TCCTGGCCATGAGGTTTAGGAATTCAGGAAAATCAATAGTTCCATTGCCA
TCAGCATCCACTTCATTGATCATGTCCTGGAGCTCAGCCTCAGTGGGGTT
CTGACCCAGTGACCTC
back to top