DN621611

Overview
NameDN621611
Unique NameDN621611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CALM_HETTR (Calmodulin OS=Heterocapsa triquetra PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.867e-54
Identity = 104/112 (92.86%), Postives = 110/112 (98.21%), Query Frame = -2 
Query:  380 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 715
            RSLGQNPTEAELQDMINEVD+DGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:   38 RSLGQNPTEAELQDMINEVDSDGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CALM_EPIAK (Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3)

HSP 1 Score: 210.69 bits (535), Expect = 6.357e-54
Identity = 101/112 (90.18%), Postives = 109/112 (97.32%), Query Frame = -2 
Query:  380 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 715
            RSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   38 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQIMTAK 149
[Close]
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CALM3_SOLTU (Putative calmodulin-3 (Fragment) OS=Solanum tuberosum GN=PCM3 PE=5 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.302e-54
Identity = 105/112 (93.75%), Postives = 109/112 (97.32%), Query Frame = -2 
Query:  380 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 715
            RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK+KDTD EEELKEAFRVFDKD+NGFISAAEL HVMTNLGEKLTDEEVDE+IREADVD DGQINY+EFVKVMMAK
Sbjct:   13 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKIKDTDFEEELKEAFRVFDKDRNGFISAAELPHVMTNLGEKLTDEEVDEIIREADVDCDGQINYDEFVKVMMAK 124
[Close]
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CALM_XENLA (Calmodulin OS=Xenopus laevis GN=calm1 PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.084e-53
Identity = 101/112 (90.18%), Postives = 109/112 (97.32%), Query Frame = -2 
Query:  380 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 715
            RSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   38 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CALM_TORCA (Calmodulin OS=Torpedo californica PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.084e-53
Identity = 101/112 (90.18%), Postives = 109/112 (97.32%), Query Frame = -2 
Query:  380 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 715
            RSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   38 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CALM_SHEEP (Calmodulin OS=Ovis aries GN=CALM2 PE=2 SV=3)

HSP 1 Score: 209.92 bits (533), Expect = 1.084e-53
Identity = 101/112 (90.18%), Postives = 109/112 (97.32%), Query Frame = -2 
Query:  380 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 715
            RSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   38 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CALM_RAT (Calmodulin OS=Rattus norvegicus GN=Calm1 PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.084e-53
Identity = 101/112 (90.18%), Postives = 109/112 (97.32%), Query Frame = -2 
Query:  380 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 715
            RSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   38 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CALM_RABIT (Calmodulin OS=Oryctolagus cuniculus GN=CALM PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.084e-53
Identity = 101/112 (90.18%), Postives = 109/112 (97.32%), Query Frame = -2 
Query:  380 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 715
            RSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   38 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CALM_PONAB (Calmodulin OS=Pongo abelii GN=CALM PE=2 SV=3)

HSP 1 Score: 209.92 bits (533), Expect = 1.084e-53
Identity = 101/112 (90.18%), Postives = 109/112 (97.32%), Query Frame = -2 
Query:  380 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 715
            RSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   38 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of DN621611 vs. ExPASy Swiss-Prot
Match: CALM_PERFV (Calmodulin OS=Perca flavescens GN=calm PE=2 SV=3)

HSP 1 Score: 209.92 bits (533), Expect = 1.084e-53
Identity = 101/112 (90.18%), Postives = 109/112 (97.32%), Query Frame = -2 
Query:  380 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 715
            RSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   38 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
The following BLAST results are available for this feature:
BLAST of DN621611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 392
Match NameE-valueIdentityDescription
CALM_HETTR4.867e-5492.86Calmodulin OS=Heterocapsa triquetra PE=2 SV=1[more]
CALM_EPIAK6.357e-5490.18Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3[more]
CALM3_SOLTU8.302e-5493.75Putative calmodulin-3 (Fragment) OS=Solanum tubero... [more]
CALM_XENLA1.084e-5390.18Calmodulin OS=Xenopus laevis GN=calm1 PE=1 SV=2[more]
CALM_TORCA1.084e-5390.18Calmodulin OS=Torpedo californica PE=1 SV=2[more]
CALM_SHEEP1.084e-5390.18Calmodulin OS=Ovis aries GN=CALM2 PE=2 SV=3[more]
CALM_RAT1.084e-5390.18Calmodulin OS=Rattus norvegicus GN=Calm1 PE=1 SV=2[more]
CALM_RABIT1.084e-5390.18Calmodulin OS=Oryctolagus cuniculus GN=CALM PE=1 S... [more]
CALM_PONAB1.084e-5390.18Calmodulin OS=Pongo abelii GN=CALM PE=2 SV=3[more]
CALM_PERFV1.084e-5390.18Calmodulin OS=Perca flavescens GN=calm PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P06_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621611 ID=DN621611; Name=DN621611; organism=Citrus sinensis; type=EST; length=716bp
ACCAAAGAAATAAAATTATATGGCCAAGAAACCTAAGCTGATAGCCTGAT
ACATAAAATAGGATACATATTTCGACCAAAAGAAAAATAAACATCGCAAG
GGCAGAAATTAATGAAACACATTAAACAGACAACAACATTCATAGAACAG
CAGAACAACTAAAATAATAAAAACCGAAAAGTTTTTCGAGTCACAAGACA
TATTGACGAGGGAGACAACATTCTTCCTACACCATCAGGCCCATCACCAT
TAAAAGACCATTGCTTCCTTTAGCCTGACCCTCATGACTATCAAATTAAA
AATTGTAAAAGAGAAAACTAGGAATCCCTTTATAATTTAGTCAACCCATT
TTATAAGTATTGGTGGGTTGGGGTCATTACTTGGCCATCATAACCTTGAC
AAATTCCTCATAATTTATCTGGCCATCACCATCAACATCAGCTTCCCTTA
TCATCTCATCAACTTCTTCATCAGTAAGTTTCTCTCCTAGGTTTGTCATC
ACATGGCGCAGCTCAGCAGCTGAGATGAAACCATTCTGATCCTTGTCGAA
AACCCGGAAGGCCTCTTTCAGCTCCTCCTCAGAGTCGGTATCCTTCATCT
TCCTGGCCATGAGGTTTAGGAATTCAGGAAAATCAATAGTTCCATTGCCA
TCAGCATCCACTTCATTGATCATGTCCTGGAGCTCAGCCTCAGTGGGGTT
CTGACCCAGTGACCTC
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