DN621603

Overview
NameDN621603
Unique NameDN621603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621603 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.912e-40
Identity = 82/161 (50.93%), Postives = 108/161 (67.08%), Query Frame = -3
Query:  153 DFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNK 635
            DFFF+G+ KP    + +G   T ANVE+IPGLNTL +S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+T+    N L  K +  G+VFVFP+GL+HFQ N GK+ A+  SA NSQ PG  ++A T+F A P++  D L K FQ+  K+V  ++ +
Sbjct:   57 DFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITT---ANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTFQVGSKMVDKIKER 214          
BLAST of DN621603 vs. ExPASy Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.722e-40
Identity = 87/165 (52.73%), Postives = 110/165 (66.67%), Query Frame = -3
Query:  150 AEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 641
            A DFFF+G+GKP    N +G   T ANVE+I GLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+T+    N L AK + KG+VFVFP+GLIH+Q N  K   A+  SA NSQ PG  +IA T+F A P+I    L   FQ+  K ++ +++KF
Sbjct:   54 ASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITT---ANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKF 215          
BLAST of DN621603 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.720e-39
Identity = 85/170 (50.00%), Postives = 120/170 (70.59%), Query Frame = -3
Query:  150 AEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYG-QRPPHIHPRASEIFLVLEGTLYVGFV--TSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFG-ANPSINPDFLGKAFQLDPKIVKDLQNKF 641
            AEDFFF GLGKP +  + N +G   T A VE+IPGLNTLG+S  R+DYAP+G   PPH HPRA+EI  V +G L VGFV  T+   ++ LI +V+ KG VFVFP+GL+H++ ++G+  A A SA +SQ PG    AD +FG ++P++  D L +AFQ+D  +V+++++KF
Sbjct:   63 AEDFFFPGLGKPADVYSGNPMGSAVTAATVERIPGLNTLGVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVVPKGGVFVFPRGLLHYERSVGEKPAVAISAFDSQLPGTQAAADALFGSSSPAVPTDVLARAFQVDGGVVENIKSKF 232          
BLAST of DN621603 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.247e-39
Identity = 87/164 (53.05%), Postives = 108/164 (65.85%), Query Frame = -3
Query:  150 AEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 641
            AEDFF + L K G T N  G   T ANV++IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+T+    N LIAK + KG+ FVFP+GL+HFQ N G   A   +  NSQ PG V I  T+F A P +  + L KAFQ+  K V+ +++KF
Sbjct:   53 AEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITT---TNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPVPDNVLTKAFQIGTKEVQKIKSKF 213          
BLAST of DN621603 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.118e-37
Identity = 77/164 (46.95%), Postives = 106/164 (64.63%), Query Frame = -3
Query:  150 AEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 641
            ++DFFF+GL    +T NR G + T AN E  PGLNTLG+S  R+D AP G  P H HPRA+E+  V+ G +  GFV++        +KVL +G+ FV P+G+IHFQ+N+G   A   +A NSQ PG V    T+FG++P I    L K+FQ+D KI+K L++KF
Sbjct:   65 SDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFVST---AGEFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSDPEIPDAVLAKSFQVDAKIIKLLKSKF 225          
BLAST of DN621603 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.363e-36
Identity = 79/174 (45.40%), Postives = 110/174 (63.22%), Query Frame = -3
Query:  138 PKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 656
            P     +DF FS  L K GNT+   G   TD NV + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+     NSQ P  V +  T+FG+NP I    L KA +++  +V+ L++KF  G+
Sbjct:   51 PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVFFNSQSPSVVFVPLTLFGSNPPIPKPVLTKALRVEAGVVELLKSKFAGGS 224          
BLAST of DN621603 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.780e-36
Identity = 78/173 (45.09%), Postives = 112/173 (64.74%), Query Frame = -3
Query:  141 PKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 656
            P     +DF FS  L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+   + NSQ PG V +  T+FG+NP I    L KA +++ ++V+ L++KF  G
Sbjct:   51 PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEARVVELLKSKFAAG 223          
BLAST of DN621603 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.037e-36
Identity = 79/143 (55.24%), Postives = 94/143 (65.73%), Query Frame = -3
Query:  234 KDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFG 662
            KD     + DFF  GL KPG T N  G   T ANV  IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEGTL VGF+T+    N LI++ L KGDVF FP+GL+HFQ N G   A+  +A NSQ PG  ++  T+FG
Sbjct:   48 KDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTT---ANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFG 187          
BLAST of DN621603 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.765e-36
Identity = 77/173 (44.51%), Postives = 111/173 (64.16%), Query Frame = -3
Query:  141 PKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 656
            P     +DF FS  L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPH+HPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+   + NSQ PG V +  T+FG+NP I    L KA +++  +V+ L++KF  G
Sbjct:   51 PMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEAGVVELLKSKFAAG 223          
BLAST of DN621603 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.507e-35
Identity = 78/174 (44.83%), Postives = 111/174 (63.79%), Query Frame = -3
Query:  138 PKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 656
            P     +DF FS  L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG++P I    L KA +++  +V+ L++KF  G+
Sbjct:   28 PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGGS 201          
The following BLAST results are available for this feature:
BLAST of DN621603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL22_ARATH5.912e-4050.93Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
GL24_ARATH7.722e-4052.73Germin-like protein subfamily 2 member 4 OS=Arabid... [more]
GL14_ORYSJ1.720e-3950.00Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
RHRE_PEA2.247e-3953.05Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GL38_ORYSJ6.118e-3746.95Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GER3_WHEAT1.363e-3645.40Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
GER2_WHEAT1.780e-3645.09Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
GL21_ARATH3.037e-3655.24Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
OXO2_HORVU6.765e-3644.51Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
OXO1_HORVU1.507e-3544.83Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P02_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621603 ID=DN621603; Name=DN621603; organism=Citrus sinensis; type=EST; length=664bp
CCACAGTCAGCCTGGGAGAGAGGTTCATGAGAGACCTCTTTTATTACATT
AATTAAGATATGATAATCTGGAGATAAAGTAATACAGCCACTAGTGAAGA
GGCCATTTATATTAAAGCTCATTAATTCCTTCTCCTAATTGCCATTAATG
AACTTATTTTGAAGATCTTTCACTATCTTTGGGTCCAACTGGAATGCCTT
GCCAAGAAAATCGGGATTGATTGAAGGATTGGCTCCAAAGACTGTGTCGG
CTATGGTAACTTCACCCGGGAATTGGCTGTTTAGAGCAGAATAGGCAGCT
GCATTTGTTTTTCCAATGTTGAATTGGAAGTGAATCAAACCTTGTGGAAA
CACAAAAACATCTCCCTTATTTAGAACTTTTGCGATGAGTGTGTTATTCA
GTTGGTCTGATGTCACAAAACCGACATAAAGAGTTCCTTCCAGGACTAAG
AAGATTTCGCTGGCACGGGGGTGAATGTGAGGTGGCCTTTGGCCATATGG
TGCATAGTCAATACGGAATGCTGATATGCCAAGGGTGTTGAGTCCTGGAA
TTTGCTCAACATTTGCATCTGTTTCATCAACACCAAGTCGATTTGCTGTG
TTTCCAGGCTTGCCTAGCCCTGAGAAGAAGAAATCTTCTGCTCTCGCAAG
CTTGGGGTCCTTGC
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