DN621600

Overview
NameDN621600
Unique NameDN621600
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621600 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPAL (Ubiquitin OS=Lupinus albus PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.121e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = -2
Query:  394 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 621
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 131.339 bits (329), Expect = 5.099e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = -2
Query:  196 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 393
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 66          

HSP 3 Score: 73.9442 bits (180), Expect = 9.660e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = -2
Query:  622 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 729
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of DN621600 vs. ExPASy Swiss-Prot
Match: UBIQ_LINUS (Ubiquitin OS=Linum usitatissimum PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.121e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = -2
Query:  394 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 621
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 131.339 bits (329), Expect = 5.099e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = -2
Query:  196 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 393
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 66          

HSP 3 Score: 73.9442 bits (180), Expect = 9.660e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = -2
Query:  622 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 729
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of DN621600 vs. ExPASy Swiss-Prot
Match: UBIQ_HORVU (Ubiquitin OS=Hordeum vulgare GN=MUB1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.121e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = -2
Query:  394 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 621
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 131.339 bits (329), Expect = 5.099e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = -2
Query:  196 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 393
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 66          

HSP 3 Score: 73.9442 bits (180), Expect = 9.660e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = -2
Query:  622 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 729
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of DN621600 vs. ExPASy Swiss-Prot
Match: UBIQ_HELAN (Ubiquitin OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.121e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = -2
Query:  394 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 621
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 131.339 bits (329), Expect = 5.099e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = -2
Query:  196 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 393
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 66          

HSP 3 Score: 73.9442 bits (180), Expect = 9.660e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = -2
Query:  622 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 729
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of DN621600 vs. ExPASy Swiss-Prot
Match: UBIQ_DESAN (Ubiquitin OS=Deschampsia antarctica PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.121e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = -2
Query:  394 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 621
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 131.339 bits (329), Expect = 5.099e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = -2
Query:  196 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 393
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 66          

HSP 3 Score: 73.9442 bits (180), Expect = 9.660e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = -2
Query:  622 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 729
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of DN621600 vs. ExPASy Swiss-Prot
Match: UBIQ_DAUCA (Ubiquitin OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.121e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = -2
Query:  394 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 621
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 131.339 bits (329), Expect = 5.099e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = -2
Query:  196 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 393
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 66          

HSP 3 Score: 73.9442 bits (180), Expect = 9.660e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = -2
Query:  622 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 729
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of DN621600 vs. ExPASy Swiss-Prot
Match: UBIQ_BRARA (Ubiquitin OS=Brassica rapa PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.121e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = -2
Query:  394 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 621
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 131.339 bits (329), Expect = 5.099e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = -2
Query:  196 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 393
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 66          

HSP 3 Score: 73.9442 bits (180), Expect = 9.660e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = -2
Query:  622 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 729
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of DN621600 vs. ExPASy Swiss-Prot
Match: UBIQ_AVESA (Ubiquitin OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.121e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = -2
Query:  394 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 621
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 131.339 bits (329), Expect = 5.099e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = -2
Query:  196 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 393
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 66          

HSP 3 Score: 73.9442 bits (180), Expect = 9.660e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = -2
Query:  622 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 729
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of DN621600 vs. ExPASy Swiss-Prot
Match: UBIQ_AVEFA (Ubiquitin OS=Avena fatua PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.121e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = -2
Query:  394 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 621
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 131.339 bits (329), Expect = 5.099e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = -2
Query:  196 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 393
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 66          

HSP 3 Score: 73.9442 bits (180), Expect = 9.660e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = -2
Query:  622 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 729
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of DN621600 vs. ExPASy Swiss-Prot
Match: UBIQ_ASPOF (Ubiquitin OS=Asparagus officinalis PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.121e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = -2
Query:  394 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 621
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 131.339 bits (329), Expect = 5.099e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = -2
Query:  196 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 393
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 66          

HSP 3 Score: 73.9442 bits (180), Expect = 9.660e-13
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = -2
Query:  622 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 729
            QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
The following BLAST results are available for this feature:
BLAST of DN621600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
UBIQ_LUPAL8.121e-36100.00Ubiquitin OS=Lupinus albus PE=3 SV=1[more]
UBIQ_LINUS8.121e-36100.00Ubiquitin OS=Linum usitatissimum PE=3 SV=1[more]
UBIQ_HORVU8.121e-36100.00Ubiquitin OS=Hordeum vulgare GN=MUB1 PE=3 SV=1[more]
UBIQ_HELAN8.121e-36100.00Ubiquitin OS=Helianthus annuus PE=3 SV=1[more]
UBIQ_DESAN8.121e-36100.00Ubiquitin OS=Deschampsia antarctica PE=2 SV=1[more]
UBIQ_DAUCA8.121e-36100.00Ubiquitin OS=Daucus carota PE=3 SV=1[more]
UBIQ_BRARA8.121e-36100.00Ubiquitin OS=Brassica rapa PE=3 SV=1[more]
UBIQ_AVESA8.121e-36100.00Ubiquitin OS=Avena sativa PE=1 SV=1[more]
UBIQ_AVEFA8.121e-36100.00Ubiquitin OS=Avena fatua PE=3 SV=1[more]
UBIQ_ASPOF8.121e-36100.00Ubiquitin OS=Asparagus officinalis PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O23_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621600 ID=DN621600; Name=DN621600; organism=Citrus sinensis; type=EST; length=730bp
TTTTATTTGAACTAGAGATTTTTATTCGAAAGCATAACTTGTTCAACAAA
CAACTTATAAAAACAAAAGACAATATTATCAATGATAACTAGTCTTCTTC
AAGAAGACAAGACAACATAGCGACCAGCTTGAACAGAAAATACATTGACA
CGTCCCTCAGAAACCACCACCACGGAGACGGAGGACGAGATGAAGAGTGG
ACTCCTTCTGAATGTTGTAATCAGCAAGAGTACGGCCGTCCTCAAGCTGC
TTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTC
CTGAATCTTGGCCTTGACATTGTCAATGGTATCCGAACTCTCCACCTCCA
GGGTAATCGTCTTCCCGGTCAATGTCTTGACAAAAATCTGCATGCCACCC
CTCAGACGCAACACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATC
CGCGAGCGTCCTTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCT
GCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG
TCAATCGTGTCGGAGCTCTCGACCTCGAGGGTAATCGTCTTTCCCGTTAG
GGTTTTGACGAATATCTGCATGCCCCCACGGAGACGAAGCACGAGGTGAA
GTGTTGATTCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCCTCG
AGTTGCTTTCCTGCGAAGATCAGCCTCTGC
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