DN621598

Overview
NameDN621598
Unique NameDN621598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.453e-11
Identity = 35/111 (31.53%), Postives = 63/111 (56.76%), Query Frame = 2
Query:  104 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEE 436
            ++GN  QLGE PH    +L++ YG +  LK+G   +VV S++ AA ++LK HD    +R          +  + I +S  ++ W+ LRK+   E+F+ + ++S   +RE++
Sbjct:   37 IVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKK 147          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.897e-11
Identity = 48/161 (29.81%), Postives = 80/161 (49.69%), Query Frame = 2
Query:  104 VIGNFHQLGELPHQSLWQLSKKY-----GPVMLLKLG-RVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFA-LTGSIVFRMAFGRRFRG 565
            +IG+   L    H++L   S+       G VM L+LG R+  VV S   AA +    +D+   +RP +I      YN +++  +PY D+WR LR++  +E+FS  R+  F ++R +EV  L++               + M   LT + + RM  G+R+ G
Sbjct:   43 IIGHLRLLKPPIHRTLRSFSETLDHNDGGGVMSLRLGSRLVYVVSSHKVAAEECFGKNDVVLANRPQVIIGKHVGYNNTNMIAAPYGDHWRNLRRLCTIEIFSTHRLNCFLYVRTDEVRRLISRLSRLAGTKKTVVELKPMLMDLTFNNIMRMMTGKRYYG 203          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.209e-11
Identity = 37/112 (33.04%), Postives = 63/112 (56.25%), Query Frame = 2
Query:  110 GNFHQL-GELPHQSLWQLSKKYGPVMLLKLGR-VPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEV 439
            GN   L G  P++ +  L +KYGP++ LK+G  +  +VI +A +A ++ + HD+    RP +  +    Y    +A +PY +YWR  R+I  +E+F  +R+     IR+E V
Sbjct:    2 GNMFDLAGSAPYKKIACLKEKYGPILWLKIGSSMNTMVIQTANSASELFRNHDVSFSDRPIVDVNLAHNYYKGSMALAPYGNYWRFSRRICTVEMFVHKRINETTNIRQESV 113          
The following BLAST results are available for this feature:
BLAST of DN621598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
C80B1_ESCCA1.453e-1131.53(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C81D1_ARATH1.897e-1129.81Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C76A1_SOLME7.209e-1133.04Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O22_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621598 ID=DN621598; Name=DN621598; organism=Citrus sinensis; type=EST; length=644bp
GTGGATGTGGCTCCCTCTTCTCCTCATCCCGCTGCTGCTCATCTTGAAAA
AGCTGAAAGCACAAAACAAGCAGCAGCTTCCACCAAGCCCACCTAAGCTT
CCAGTAATAGGCAATTTTCACCAACTTGGAGAGTTGCCTCACCAATCTTT
GTGGCAACTCTCTAAAAAATACGGCCCCGTTATGCTCCTCAAACTTGGTC
GTGTGCCTCTTGTCGTAATCTCCTCGGCTGAGGCAGCAAGGGATGTATTA
AAAGTTCATGATCTCGATTGTTGCAGCAGACCACCATTAATAGGCAGTGG
GAAGTTTACGTACAACTATTCGGATATAGCTTTTTCACCATATAGCGATT
ACTGGAGGGAGTTGCGGAAAATAAGTGTCCTCGAGGTATTCAGCTTGAGA
AGAGTGCAGTCATTTGGATTCATCAGGGAAGAGGAAGTTGCCCTGCTTAT
GAATTCAATCTCTGAATCATCATCCTCTGCCTCCCCTGTTGATCTTTCTG
AGAAGATGTTTGCTCTCACTGGAAGTATAGTTTTCAGGATGGCTTTTGGG
AGGAGATTTCGAGGGAGCAATTTCGATAATCATAGTTTTCAAGAATTGGT
CCATGCCGTTGAATCTCTGTTGAGGGGATTCGCAGCAGCTGAAT
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