DN621598

Overview
NameDN621598
Unique NameDN621598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.500e-16
Identity = 47/118 (39.83%), Postives = 73/118 (61.86%), Query Frame = 2
Query:  104 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSD-YWRELRKISVLEVFSLRRVQSFGFIREEEVALLMN 454
            +IGN H +G+ PH+S  +LSK YGPVM LKLG +  VVI+S EAAR+VL+ HD    +R P        +  + + + P S   WR LR++SV ++ S +R+++   +R  +V  L++
Sbjct:   47 IIGNIHLVGKHPHRSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKVKELVS 164          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.341e-16
Identity = 46/117 (39.32%), Postives = 69/117 (58.97%), Query Frame = 2
Query:  104 VIGNF-HQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 451
            +IGN  H     PH +L  L+ K+GPVM L+LG+V  VVISS  AA++VL+  D    SRP L+ +    Y   D++F+PY   WR LRK+ + E+ +  +V+    +R+ E   L+
Sbjct:   36 LIGNLLHLATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLV 152          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.699e-16
Identity = 50/167 (29.94%), Postives = 85/167 (50.90%), Query Frame = 2
Query:  104 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKM-FALTGSIVFRMAFGRRFRGSNFDNHSFQELV 601
            VIG    LG +PH SL +++KKYG +M LK+G   + V S+ +AA+  LK  D++  +RPP  G+    YN  D+ F+ Y   W+ LRK+S L +   + ++++  +R  E+  ++                E + FA+   I   M   R F     + + F+++V
Sbjct:   42 VIGALPLLGAMPHVSLAKMAKKYGAIMYLKVGTCGMAVASTPDAAKAFLKTLDINFSNRPPNAGATHLAYNAQDMVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMSDMSREGQRVVVAEMLTFAMANMIGQVMLSKRVFVDKGVEVNEFKDMV 208          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.270e-15
Identity = 42/116 (36.21%), Postives = 69/116 (59.48%), Query Frame = 2
Query:  104 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 451
            VIG    LG +PH SL +++KKYG +M LK+G   +VV S+ +AA+  LK  DL+  +RPP  G+    Y   D+ F+ Y   W+ LRK+S L +   + ++++  +R  E+  ++
Sbjct:   42 VIGALPLLGAMPHVSLAKMAKKYGAIMYLKVGTCGMVVASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYGAQDMVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHML 157          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.166e-15
Identity = 52/169 (30.77%), Postives = 84/169 (49.70%), Query Frame = 2
Query:  137 PHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEE-----VALLMNXXXXXXXXXXXXXXXEKMFAL-TGSIVFRMAFGRRFRGSNFDNHSFQELVHAVESLLR 625
            PH++L  L++K+GP+  +KLG    +V+S  E AR+    +D+   +RP L+ +    YN + +  +PY  YWRELRKI V E+ S  RV+    +R  E     V L                  ++ FA    ++V RM  G+RF  +   +   ++ V AV+  +R
Sbjct:   62 PHKALGALAEKHGPLFTIKLGAKKALVVSDWEMARECFTTNDVAVSARPKLLVAELMCYNNAMLLVAPYGPYWRELRKIIVTEILSSSRVEQLQDVRVSEVQNSIVELYDVWRSQKNESDYASVELKQWFAQPIFNMVLRMVVGKRFLSATATDEKAEKCVKAVDEFMR 230          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.166e-15
Identity = 57/184 (30.98%), Postives = 87/184 (47.28%), Query Frame = 2
Query:  104 VIGNFHQL--GELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEV-----ALLMNXXXXXXXXXXXXXXXEKMF--ALTGSIVFRMAFGRR-FRGSNFDNHSFQELVHAVESLLR 625
            +IG+   L   + PH++L  L+ KYGP+  +K+G    VV+S+ E A++    +D+   S P LI +    YN S I  +PY  YWR+LRKI + E  S  RV+    +R  EV      L  +                K +   L  +++ RM  G+R F  S  D+      V AV+  +R
Sbjct:   46 IIGHLPLLLGSKTPHKTLGDLADKYGPIFSIKIGAKNAVVVSNWEMAKECYTTNDIAVSSLPDLISANLLCYNRSMIVVAPYGPYWRQLRKILMSEFLSPSRVEQLHHVRVSEVQSSITELFRDWRSNKNVQSGFATVELKQWFSLLVFNMILRMVCGKRYFSASTSDDEKANRCVKAVDEFVR 229          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.166e-15
Identity = 45/167 (26.95%), Postives = 85/167 (50.90%), Query Frame = 2
Query:  104 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIVFRMAFGRR-FRGSNFDNHSFQELV 601
            ++G    LG +PH +   ++KKYG VM LK+G   L + S+ +AA+  LK  DL+  +RPP  G+    YN  D+ F+ Y   W+ LRK+S L +   + ++++  +R+ E+  ++                E +     +++ ++   RR F      ++ F+++V
Sbjct:   50 ILGALPLLGNMPHVTFANMAKKYGSVMYLKVGSHGLAIASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYNAQDMVFAHYGPKWKLLRKLSNLHMLGGKALENWADVRKTELGYMLKAMFESSQNNEPVMISEMLTYAMANMLSQVILSRRVFNKKGAKSNEFKDMV 216          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.828e-15
Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 2
Query:  131 ELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEV 439
            + PH++L  L  KYGP+  +KLG    +V+S+ E A++    +D+   SRP  +     +YN + I ++PY  YWR+LRKI  LE+ S RR++    IR  EV
Sbjct:   55 QTPHKTLGALVDKYGPIFTIKLGATNALVLSNWELAKECFTKNDIVVSSRPKPVAVELMSYNQAFIGWAPYGAYWRQLRKIVTLEILSNRRIELLSHIRVSEV 157          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.230e-15
Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 2
Query:  104 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 451
            +IG    LG +PH SL  ++ KYGP+M LKLG    VV S+ +AAR  LK HD +  +RP   G     YN  D+ F+ Y   W+ LRK+  L +   + ++ +  ++  EV  ++
Sbjct:   47 IIGALPLLGTMPHVSLADMAVKYGPIMYLKLGSKGTVVASNPKAARAFLKTHDANFSNRPIDGGPTYLAYNAQDMVFAEYGPKWKLLRKLCSLHMLGPKALEDWAHVKVSEVGHML 162          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.075e-14
Identity = 53/182 (29.12%), Postives = 90/182 (49.45%), Query Frame = 2
Query:  104 VIGNFHQL-GELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSR--PP-----LIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIVFRMAFGRRFRGSNFDNHSFQELVHAVESLLR 625
            +IG+ H L   L H+SL QLS KYGP++ L +   P+V++SSA  A ++ K HDL+  SR  PP     L+GS  F         +PY DYW+ ++K+ V ++   + ++    IR +E+                    ++   L+ + + RM+ GR F   + +    + LV  ++ L +
Sbjct:   48 IIGHLHHLLSSLAHKSLQQLSSKYGPLLHLSIFNFPVVLVSSASVAYEIFKAHDLNISSRDNPPINESLLVGSSVF-------VGAPYGDYWKFMKKLLVTKLLGPQALERSRSIRADELERFYRSLLDKAMKKESVEIGKEATKLSINSICRMSMGRSFSEESGEAERVRGLVTELDGLTK 222          
The following BLAST results are available for this feature:
BLAST of DN621598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
C76C1_ARATH1.500e-1639.83Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C99A1_SORBI3.341e-1639.32Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C75A1_PETHY5.699e-1629.94Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C75A3_PETHY1.270e-1536.21Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C82A4_SOYBN2.166e-1530.77Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C82A2_SOYBN2.166e-1530.98Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C75A4_GENTR2.166e-1526.95Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C82A1_PEA2.828e-1538.83Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C75A6_CAMME8.230e-1536.21Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C75AK_ARATH1.075e-1429.12Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06O22_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621598 ID=DN621598; Name=DN621598; organism=Citrus sinensis; type=EST; length=644bp
GTGGATGTGGCTCCCTCTTCTCCTCATCCCGCTGCTGCTCATCTTGAAAA
AGCTGAAAGCACAAAACAAGCAGCAGCTTCCACCAAGCCCACCTAAGCTT
CCAGTAATAGGCAATTTTCACCAACTTGGAGAGTTGCCTCACCAATCTTT
GTGGCAACTCTCTAAAAAATACGGCCCCGTTATGCTCCTCAAACTTGGTC
GTGTGCCTCTTGTCGTAATCTCCTCGGCTGAGGCAGCAAGGGATGTATTA
AAAGTTCATGATCTCGATTGTTGCAGCAGACCACCATTAATAGGCAGTGG
GAAGTTTACGTACAACTATTCGGATATAGCTTTTTCACCATATAGCGATT
ACTGGAGGGAGTTGCGGAAAATAAGTGTCCTCGAGGTATTCAGCTTGAGA
AGAGTGCAGTCATTTGGATTCATCAGGGAAGAGGAAGTTGCCCTGCTTAT
GAATTCAATCTCTGAATCATCATCCTCTGCCTCCCCTGTTGATCTTTCTG
AGAAGATGTTTGCTCTCACTGGAAGTATAGTTTTCAGGATGGCTTTTGGG
AGGAGATTTCGAGGGAGCAATTTCGATAATCATAGTTTTCAAGAATTGGT
CCATGCCGTTGAATCTCTGTTGAGGGGATTCGCAGCAGCTGAAT
back to top