DN621597

Overview
NameDN621597
Unique NameDN621597
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621597 vs. ExPASy Swiss-Prot
Match: C6A14_DROME (Probable cytochrome P450 6a14 OS=Drosophila melanogaster GN=Cyp6a14 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11
Identity = 52/151 (34.44%), Postives = 73/151 (48.34%), Query Frame = -2
Query:  176 QLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIY--PKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQD-FEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLI 619
            Q+ YL  V+ ETLR HP  P LI R+T   +++   DI      L  +    I  D + +  PE+F P RF   P +VK +    YLPFG G R C G+  G I +++ L +LL  F + + N              T V L  SKK+ L+
Sbjct:  362 QMTYLDQVLSETLRKHPLLPHLI-RETTKDYQIPNSDIVLDKGILALIPVHNIHHDPEIYPEPEKFDPSRF--DPEEVKNRHPMAYLPFGDGPRNCIGLRFGKIQAKIGLVSLLRRFKFSVSN-------------RTDVPLIFSKKSFLL 496          
BLAST of DN621597 vs. ExPASy Swiss-Prot
Match: C4AC3_DROME (Probable cytochrome P450 4ac3 OS=Drosophila melanogaster GN=Cyp4ac3 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11
Identity = 43/132 (32.58%), Postives = 74/132 (56.06%), Query Frame = -2
Query:  245 VTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREED 640
            V+    ++L +L+ VIKE+LRL P AP+ I R  +    +NG  +     I ++ + I RD++++  P +F+PERF+ +   V    F ++PF +G R C G   G++  ++ LA ++  F   LP  + ED
Sbjct:  357 VSMFQFNELIHLECVIKESLRLFPSAPI-IGRTCIEESVMNGLVLPKNAQISIHIYDIMRDARHFPKPNQFLPERFLPEN-SVNRHPFAFVPFSAGPRNCIGQKFGVLEIKVLLAAVIRNFK-LLPATQLED 485          
BLAST of DN621597 vs. ExPASy Swiss-Prot
Match: CP133_DROME (Probable cytochrome P450 313a3 OS=Drosophila melanogaster GN=Cyp313a3 PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11
Identity = 42/121 (34.71%), Postives = 72/121 (59.50%), Query Frame = -2
Query:  287 VTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTL-IQVNAWAIGRDSKYWES-PEEFIPERFIDKPVDVKGQD-FEYLPFGSGRRICPGINLGLIMSELALANLL 640
            VT  D+ ++ +L+ V+ ETLRL P  P    R+T+  F+++   + PK + I ++ +A  R+  +W + P  F P+ F+  P +V+ +  + Y+PF  GRR C G   GL+ S+LAL+ +L
Sbjct:  339 VTYDDLQRMVFLERVVNETLRLIPSVPFT-PRETIRDFRLSSGVVIPKGVGIGIDIFATHRNRDHWGTDPSSFNPDHFL--PDNVRDRHPYAYIPFSKGRRNCIGWKYGLMSSKLALSKIL 456          
BLAST of DN621597 vs. ExPASy Swiss-Prot
Match: C4D21_DROME (Probable cytochrome P450 4d21 OS=Drosophila melanogaster GN=Cyp4d21 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11
Identity = 45/153 (29.41%), Postives = 76/153 (49.67%), Query Frame = -2
Query:  185 VTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGRE-EDCVNMNMEEATGVSLTLSKKT 640
            VT+  + +L+YL  VIKET+RLHPP P+L  R      K+    I   T I +  + + RD +Y+  P  F PER++D           Y+PF SG + C G     +  +  ++ ++  ++  LP G + +      +  +TG ++ L  +T
Sbjct:  358 VTQTKLLELKYLDCVIKETMRLHPPVPIL-GRYIPEDLKIGEITIPGNTSILLMPYYVYRDPEYFPDPLVFKPERWMDMKTTSNTPPLAYIPFSSGPKNCIGQKFANLQMKALISKVIRHYE-LLPLGADLKATYTFILSSSTGNNVGLKPRT 508          
BLAST of DN621597 vs. ExPASy Swiss-Prot
Match: C4AC1_DROME (Probable cytochrome P450 4ac1 OS=Drosophila melanogaster GN=Cyp4ac1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11
Identity = 48/165 (29.09%), Postives = 83/165 (50.30%), Query Frame = -2
Query:  188 EIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMN---MEEATGVSLTLSKK 673
            E+ N   +   ++    ++L YL+ VIKE+LR+ P  P  I R  +    VNG  +   T I ++ + I RD +++  P+ F P+RF+ +   V    F Y+PF +G+R C G    ++  ++ LA ++  F   LP  + ED    N   +     + + LSK+
Sbjct:  346 EVENLPEDSDDISMFQFNKLVYLECVIKESLRMFPSVPF-IGRQCVEETVVNGMVMPKDTQISIHIYDIMRDPRHFPKPDLFQPDRFLPENT-VNRHPFAYVPFSAGQRNCIGQKFAILEMKVLLAAVIRNFK-LLPATQLEDLTFENGIVLRTQENIKVKLSKR 507          
BLAST of DN621597 vs. ExPASy Swiss-Prot
Match: CP1A1_HUMAN (Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11
Identity = 48/147 (32.65%), Postives = 67/147 (45.58%), Query Frame = -2
Query:  245 QAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFI--DKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREED 679
            Q E+   IG   R   +D   L Y++  I ET R     P  I   T     + G+ I     + VN W I  D K W +P EF+PERF+  D  +D K    + + FG G+R C G  +      L LA LL   ++ +P G + D
Sbjct:  344 QEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAID-KVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVD 489          
BLAST of DN621597 vs. ExPASy Swiss-Prot
Match: CP11A_RAT (Cholesterol side-chain cleavage enzyme, mitochondrial OS=Rattus norvegicus GN=Cyp11a1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11
Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = -2
Query:  278 LKMVIKETLRLHPPAPLLIARDTLYRFKVN-----GYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCF 607
            LK  IKETLRLHP +       TL R+ VN      Y I  KTL+QV ++A+GR+S ++ +P +F P R+++K  +     F YL FG G R C G  +  +   + L N+L  F
Sbjct:  374 LKASIKETLRLHPISV------TLQRYIVNDLVLRNYKIPAKTLVQVASYAMGRESSFFPNPNKFDPTRWLEKSQNT--THFRYLGFGWGVRQCLGRRIAELEMTIFLINVLENF 480          
BLAST of DN621597 vs. ExPASy Swiss-Prot
Match: C6A13_DROME (Probable cytochrome P450 6a13 OS=Drosophila melanogaster GN=Cyp6a13 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11
Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = -2
Query:  278 NKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTL-YRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQD-FEYLPFGSGRRICPGINLGLIMSELALANLLYCF 652
            N  ++T   + ++ YL  V+ ETLR +P  P L+ R T  Y+   +   + P + I +   +I  D + +  PE+F P RF  +P ++K +  F YLPFG G R C G   G +  ++ L  LL  F
Sbjct:  332 NNQKLTYDSVQEMPYLDQVVAETLRKYPILPHLLRRSTKEYQIPNSNLILEPGSKIIIPVHSIHHDPELYPDPEKFDPSRF--EPEEIKARHPFAYLPFGEGPRNCIGERFGKLQVKVGLVYLLRDF 456          
The following BLAST results are available for this feature:
BLAST of DN621597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 288
Match NameE-valueIdentityDescription
C6A14_DROME4.663e-1134.44Probable cytochrome P450 6a14 OS=Drosophila melano... [more]
C4AC3_DROME4.663e-1132.58Probable cytochrome P450 4ac3 OS=Drosophila melano... [more]
CP133_DROME6.090e-1134.71Probable cytochrome P450 313a3 OS=Drosophila melan... [more]
C4D21_DROME6.090e-1129.41Probable cytochrome P450 4d21 OS=Drosophila melano... [more]
C4AC1_DROME6.090e-1129.09Probable cytochrome P450 4ac1 OS=Drosophila melano... [more]
CP1A1_HUMAN7.954e-1132.65Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1... [more]
CP11A_RAT7.954e-1139.13Cholesterol side-chain cleavage enzyme, mitochondr... [more]
C6A13_DROME7.954e-1133.07Probable cytochrome P450 6a13 OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621597 ID=DN621597; Name=DN621597; organism=Citrus sinensis; type=EST; length=680bp
CATACATAATTTAGGTGATGATAATACATTATCCTCAAATACATGATTAC
AAGTGATTACATTACAATCAACCACAACTTGTACAGGAAGTTGAGGAAGT
TACAACAGAGCAATGTTGTTGTTGTCTTTCATTTTTCTGATGGCTATGCT
ACTGGAGGTAATTGACTGGCACAAGGATAAGAGGCGTCTTTTTAGAGAGA
GTGAGAGACACACCAGTTGCCTCCTCCATGTTCATGTTAACACAATCCTC
CTCCCTTCCATTCGGCAATTTCCAATCAAAACAATACAAGAGATTTGCAA
GCGCAAGCTCCGACATTATTAATCCCAAATTAATCCCAGGACAAATTCTT
CGGCCGGATCCAAATGGTAAATATTCGAAATCTTGTCCTTTAACATCAAC
CGGCTTATCAATAAACCTTTCTGGGATGAATTCTTCAGGACTCTCCCAGT
ACTTTGAATCTCTTCCAATTGCCCAGGCATTCACTTGGATCAACGTTTTG
GGATAAATGTCATAACCATTAACTTTGAAACGATACAGGGTATCTCTCGC
AATTAATAGTGGGGCAGGAGGGTGCAGTCTCAGAGTTTCCTTGATCACCA
TCTTCAGGTACTGAAGTTGATCAATATCGGCTTCGGTAACTCTTCCTTTG
TTTCCGATATGATTTCTGATTTCAGCTTGT
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