DN621595

Overview
NameDN621595
Unique NameDN621595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.776e-19
Identity = 56/143 (39.16%), Postives = 78/143 (54.55%), Query Frame = 3
Query:   51 KTDKLKENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDYV 479
            K D  +E       +M  +YYP C +PDLT+G   H DP  LTIL QD   GLQ+    +W  ++P P A V+NIGD    +SND Y S  HR + NS  E R S+A F  P ++D +  P  EL+      R+  FT++ ++
Sbjct:  212 KRDYFREFFEENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQDHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESE-RKSLAFFLCP-KKDRVVTPPRELLDSITSRRYPDFTWSMFL 352          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.776e-19
Identity = 47/126 (37.30%), Postives = 75/126 (59.52%), Query Frame = 3
Query:  105 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEE-WVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDYV 479
            ++YP CP+PD  +G+ +HTD   +TIL Q++  GLQ+   +  WV   PVPG+LV+N+GD+L I++N  + SV HR   N  +  R S+A  + P   D +  P P+L+ P +   +   T+  Y+
Sbjct:  208 NHYPKCPEPDRAMGLAAHTDSTLMTILYQNNTAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRARVN-HVRSRFSMAYLWGPPS-DIMISPLPKLVDPLQSPLYPSLTWKQYL 331          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.064e-18
Identity = 45/125 (36.00%), Postives = 72/125 (57.60%), Query Frame = 3
Query:  105 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDYV 479
            ++YP CP PD  +G   H D   +T+LL     GL++ +  +W+ V P P A V+N G  L++++N    S+EHR + NS+L  R S+A F  P++ + L GP  E +S E P  +R   + D++
Sbjct:  192 NHYPSCPNPDKALGQPPHCDRNLITLLLPGAVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNSAL-ARTSVATFIMPTQ-ECLIGPAKEFLSKENPPCYRTTMFRDFM 314          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.815e-18
Identity = 51/121 (42.15%), Postives = 69/121 (57.02%), Query Frame = 3
Query:  105 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTY 467
            +YYP C +P  T+G   H DP  LTIL QD  GGL++     W  ++P PGALV+N+GD    +SN  Y S  HR + NS+  PR S+A F  P E D++  P  EL+    P  +  FT+
Sbjct:  217 NYYPACQRPLDTLGTGPHCDPTSLTILHQDHVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNST-APRRSLAFFLCP-EMDTVVRPPEELVDDHHPRVYPDFTW 335          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.815e-18
Identity = 46/129 (35.66%), Postives = 77/129 (59.69%), Query Frame = 3
Query:   93 MMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDYV 479
            M + HY PY P  D   G+  HTD   LT+++ ++  GLQ+   + W++V+ +P A+++NIGD + ++SN +Y +V H+   +   + R+S  V  +P+  D + GP PEL S + P +F+   Y DYV
Sbjct:  155 MNINHYPPY-PHSDSFNGLEPHTDINGLTLIITNEIPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKTTVDKE-KTRMSWPVLVSPT-YDMVVGPLPELTSEDDPPKFKPIAYKDYV 280          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 48/124 (38.71%), Postives = 74/124 (59.68%), Query Frame = 3
Query:  111 YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDYV 479
            YP CP+P++  G+ +HTD G + +L QDDK  GLQ+    +W+DV P+  ++VIN+GD L++++N  Y S+ HRV+       R+SIA F+NP   D+   P   L    K   +  F + DY+
Sbjct:  165 YPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVVTQKE-GNRMSIASFYNPGS-DAEISPASSLAC--KETEYPSFVFDDYM 284          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 58/152 (38.16%), Postives = 79/152 (51.97%), Query Frame = 3
Query:   78 FLEGR--MMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTY---TDYVTRFFTKQLDGKTL 518
            F EG   +M  +YYP C +P  T+G   H DP  LTIL QD+ GGLQ+     W  ++P   A V+NIGD    +SN  Y S  HR + NS + PR S+A F  P E D +  P   L+    P  +  FT+    D+  + +  + D KTL
Sbjct:  196 FFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKV-PRKSLAFFLCP-EMDKVVAPPGTLVDAANPRAYPDFTWRSLLDFTQKHY--RADMKTL 343          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17
Identity = 50/136 (36.76%), Postives = 73/136 (53.68%), Query Frame = 3
Query:  105 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNP------------------SERDSLYGPFPELISPEKPARFRQ 458
            +YYP CPQP+L +G+ +HTD   LT +L +   GLQ+ +  +WV  K VP +++++IGD ++I+SN +Y S+ HR L N   + RIS AVF  P                  S   S   PFP + S     R R+
Sbjct:  221 NYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGLVNKE-KVRISWAVFCEPPKEKIILKAHCQRRCLRLSHHSSHLAPFPNIFSTSSSGRPRR 355          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17
Identity = 58/152 (38.16%), Postives = 79/152 (51.97%), Query Frame = 3
Query:   78 FLEGR--MMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTY---TDYVTRFFTKQLDGKTL 518
            F EG   +M  +YYP C +P  T+G   H DP  LTIL QD+ GGLQ+     W  ++P   A V+NIGD    +SN  Y S  HR + NS + PR S+A F  P E D +  P   L+    P  +  FT+    D+  + +  + D KTL
Sbjct:  196 FFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRV-PRKSLAFFLCP-EMDKVVAPPGTLVDASNPRAYPDFTWRSLLDFTQKHY--RADMKTL 343          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 58/152 (38.16%), Postives = 79/152 (51.97%), Query Frame = 3
Query:   78 FLEGR--MMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTY---TDYVTRFFTKQLDGKTL 518
            F EG   +M  +YYP C +P  T+G   H DP  LTIL QD+ GGLQ+     W  ++P   A V+NIGD    +SN  Y S  HR + NS + PR S+A F  P E D +  P   L+    P  +  FT+    D+  + +  + D KTL
Sbjct:  196 FFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRV-PRKSLAFFLCP-EMDKVVAPPGTLVDAANPRAYPDFTWRSLLDFTQKHY--RADMKTL 343          
The following BLAST results are available for this feature:
BLAST of DN621595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GAOX1_ARATH4.776e-1939.16Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
G3OX2_ARATH4.776e-1937.30Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
IDS3_HORVU1.064e-1836.002'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
GAOX1_ORYSJ1.815e-1842.15Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
FLS_MATIN1.815e-1835.66Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
ACCO1_BRAJU6.896e-1838.711-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
GAO1B_WHEAT9.006e-1838.16Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
LDOX_VITVI1.176e-1736.76Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
GAO1A_WHEAT1.176e-1738.16Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
GAO1D_WHEAT1.536e-1738.16Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621595 ID=DN621595; Name=DN621595; organism=Citrus sinensis; type=EST; length=691bp
AAAAGCTCGGAGAGCTTTTGTTTGGGCTGCTGTGTGAAGGTTTGGGGTTG
AAAACCGATAAGTTGAAGGAAAATACCTTCCTGGAAGGGAGGATGATGGT
GGGCCATTATTATCCCTACTGTCCGCAGCCTGATCTGACAGTGGGGATCA
CATCTCATACTGATCCAGGGCCATTGACAATCTTGTTGCAAGATGATAAA
GGTGGGCTGCAAATTAAGCATGGTGAGGAATGGGTGGATGTTAAACCAGT
TCCAGGAGCTCTGGTTATTAACATTGGAGATATACTTCAGATTATGTCCA
ATGATGAATACATAAGTGTAGAGCATAGAGTATTGGCTAATTCGTCCCTG
GAACCACGAATCTCAATTGCTGTTTTCTTCAATCCAAGCGAGAGGGACAG
CCTTTATGGACCATTCCCGGAGCTGATATCCCCAGAGAAGCCAGCTCGTT
TTCGGCAGTTCACATACACGGACTATGTAACAAGGTTCTTCACAAAACAG
TTAGATGGAAAAACATTGGTGAATTACTATAGGCTGTAAGAAACAAAATT
TGGTAAATCTGGTTGTTTGTGCCTGTATAAACTATTCTTGCGTAAGAATA
ACAATTCAAGTGCTCGTCTCATTGAAACTACAGTATGTATATATTGTTGC
TATTCACTAATTATAGCAATGTTGGGCTTCAAAAAAAAAAA
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