DN621595

Overview
NameDN621595
Unique NameDN621595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 49/127 (38.58%), Postives = 75/127 (59.06%), Query Frame = 3
Query:  105 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQI-KHG-EEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDYV 479
            ++YP CP P   +G+ +HTD G  T +LQ    GLQ+ +HG + WV V  VPGA+V+N+GD+ QI++N  + SV HR + N   + RIS+  F  P     +  P  E ++   PA +R  T+ +Y+
Sbjct:  212 NWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRESD-RISLGYFLGPPAHVKV-APLREALA-GTPAAYRAVTWPEYM 335          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 49/127 (38.58%), Postives = 75/127 (59.06%), Query Frame = 3
Query:  105 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQI-KHG-EEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDYV 479
            ++YP CP P   +G+ +HTD G  T +LQ    GLQ+ +HG + WV V  VPGA+V+N+GD+ QI++N  + SV HR + N   + RIS+  F  P     +  P  E ++   PA +R  T+ +Y+
Sbjct:  212 NWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSD-RISLGYFLGPPAHVKV-APLREALA-GTPAAYRAVTWPEYM 335          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 49/127 (38.58%), Postives = 75/127 (59.06%), Query Frame = 3
Query:  105 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQI-KHG-EEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDYV 479
            ++YP CP P   +G+ +HTD G  T +LQ    GLQ+ +HG + WV V  VPGA+V+N+GD+ QI++N  + SV HR + N   + RIS+  F  P     +  P  E ++   PA +R  T+ +Y+
Sbjct:  212 NWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSD-RISLGYFLGPPAHVKV-APLREALA-GTPAAYRAVTWPEYM 335          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17
Identity = 49/158 (31.01%), Postives = 89/158 (56.33%), Query Frame = 3
Query:   69 ENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQ--IKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDYVTRFFTKQLDGKTLVNYYRL 536
            +N   + +MM+ +YYP CP P  T+G   H D G L  LLQ D  GLQ  I     W+ V+P+P A V+N+G  L++++N+++    HRV+ + + + R+SIA    P +      P  EL++ + P  ++ ++Y+++   + + + D  + V  Y++
Sbjct:  188 DNELSQIQMMLTNYYPPCPDPSSTLGSGGHYD-GNLITLLQQDLPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRD-RVSIATLIGP-DYSCTIEPAKELLNQDNPPLYKPYSYSEFADIYLSDKSDYDSGVKPYKI 342          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17
Identity = 50/149 (33.56%), Postives = 83/149 (55.70%), Query Frame = 3
Query:  105 HYYPYCPQPDLT----VGITSHTDPGPLTILLQDDKGGLQIKHGE-EWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDYVTRFFTKQLDGKTLVNYYRL 536
            ++YP CP+  +     +G   HTDP  ++IL  ++  G QI   +  W+ V P   +  IN+GD LQ+M+N  + SV HRVLAN  ++PR+S+  F  P   + +  P P L+   K + +++FT+ +Y +  +  +L    L NY R+
Sbjct:  179 NHYPACPELAINGENLIGFGEHTDPQIISILRSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLAN-GIDPRLSMIYFCGPPLSEKI-APLPSLMK-GKESLYKEFTWFEYKSSTYGSRLADNRLGNYERI 324          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.784e-16
Identity = 48/127 (37.80%), Postives = 70/127 (55.12%), Query Frame = 3
Query:  105 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPA--RFRQFTYTDYV 479
            +YYP C QP+L +G   H DP  LTIL QD  GGLQ+    +W  + P P A V+NIGD    ++N  Y S  HR + NS  E R + A F  P + + +  P  EL++  K    ++  FT++ ++
Sbjct:  229 NYYPQCKQPELALGTGPHCDPTSLTILHQDQVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERE-RKTFAFFLCP-KGEKVVKPPEELVNGVKSGERKYPDFTWSMFL 353          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.784e-16
Identity = 45/125 (36.00%), Postives = 69/125 (55.20%), Query Frame = 3
Query:  105 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDYV 479
            ++YP C  PDLT+G   H DP  LTIL QD   GLQ+    +W  ++P P A V+NIGD    +SN  + S  HR + N     R S+A F  P ++D +  P  +++   K  ++  FT++ ++
Sbjct:  228 NHYPPCQTPDLTLGTGPHCDPSSLTILHQDHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRE-SARKSMAFFLCP-KKDKVVKPPSDILEKMKTRKYPDFTWSMFL 350          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: G2OX2_PEA (Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.878e-15
Identity = 45/133 (33.83%), Postives = 76/133 (57.14%), Query Frame = 3
Query:  141 VGITSHTDPGPLTILLQDDKGGLQIK-HGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDYVTRFFTKQLDGKTLVNYYRL 536
            +G   H+DP  LTIL  ++ GGLQI  H   W+ V P P    + +GD LQ+++N  ++SV HRVL N++ +PR+S+  F  P   + L  P  ++++   P  +R FT+  Y    +  +L G T ++ +++
Sbjct:  204 IGFGEHSDPQILTILRSNNVGGLQISTHHGLWIPVPPDPSEFYVMVGDALQVLTNGRFVSVRHRVLTNTT-KPRMSMMYFAAP-PLNWLISPLSKMVTAHSPCLYRPFTWAQYKQAAYALRL-GDTRLDQFKV 333          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.464e-15
Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = 3
Query:   69 ENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDY 476
            EN+FL     +  Y+P     ++  G+  HTD   LTIL QD  GGL++++  +W+ VKP   AL +NIGD+ Q +SN  Y SV HRV++ +++E R+SIA F  P           E+     P ++R+F++ +Y
Sbjct:  192 ENSFLR----LNKYHPSVFGSEV-FGLVPHTDTSFLTILSQDQIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIE-RMSIAFFVCPYLE-------TEIDCFGYPKKYRRFSFREY 314          
BLAST of DN621595 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.320e-15
Identity = 46/148 (31.08%), Postives = 82/148 (55.41%), Query Frame = 3
Query:  105 HYYPYCPQPDLT----VGITSHTDPGPLTILLQDDKGGLQIKHGE-EWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSLEPRISIAVFFNPSERDSLYGPFPELISPEKPARFRQFTYTDYVTRFFTKQLDGKTLVNYYR 533
            ++YP CP+        VG   HTDP  +++L  +   GLQI   +  WV V P   +  IN+GD LQ+M+N  + SV+HRVLA+++ + R+S+  F  P+  +++  P P ++   +   +++FT+ +Y    +T +L    L  + +
Sbjct:  183 NHYPPCPEVQALNRNLVGFGEHTDPQIISVLRSNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNGRFKSVKHRVLADTT-KSRLSMIYFGGPALSENI-APLPSVMLKGEECLYKEFTWCEYKKAAYTSRLADNRLAPFQK 328          
The following BLAST results are available for this feature:
BLAST of DN621595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
G3O23_WHEAT1.536e-1738.58Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
G3O22_WHEAT1.536e-1738.58Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
G3O21_WHEAT1.536e-1738.58Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aes... [more]
HY6H_HYONI5.838e-1731.01Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
G2OX1_PEA5.838e-1733.56Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum ... [more]
GAOX3_ARATH3.784e-1637.80Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
GAOX2_ARATH3.784e-1636.00Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
G2OX2_PEA1.878e-1533.83Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum ... [more]
G2OX7_ARATH5.464e-1536.76Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
G2OX_PHACN9.320e-1531.08Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621595 ID=DN621595; Name=DN621595; organism=Citrus sinensis; type=EST; length=691bp
AAAAGCTCGGAGAGCTTTTGTTTGGGCTGCTGTGTGAAGGTTTGGGGTTG
AAAACCGATAAGTTGAAGGAAAATACCTTCCTGGAAGGGAGGATGATGGT
GGGCCATTATTATCCCTACTGTCCGCAGCCTGATCTGACAGTGGGGATCA
CATCTCATACTGATCCAGGGCCATTGACAATCTTGTTGCAAGATGATAAA
GGTGGGCTGCAAATTAAGCATGGTGAGGAATGGGTGGATGTTAAACCAGT
TCCAGGAGCTCTGGTTATTAACATTGGAGATATACTTCAGATTATGTCCA
ATGATGAATACATAAGTGTAGAGCATAGAGTATTGGCTAATTCGTCCCTG
GAACCACGAATCTCAATTGCTGTTTTCTTCAATCCAAGCGAGAGGGACAG
CCTTTATGGACCATTCCCGGAGCTGATATCCCCAGAGAAGCCAGCTCGTT
TTCGGCAGTTCACATACACGGACTATGTAACAAGGTTCTTCACAAAACAG
TTAGATGGAAAAACATTGGTGAATTACTATAGGCTGTAAGAAACAAAATT
TGGTAAATCTGGTTGTTTGTGCCTGTATAAACTATTCTTGCGTAAGAATA
ACAATTCAAGTGCTCGTCTCATTGAAACTACAGTATGTATATATTGTTGC
TATTCACTAATTATAGCAATGTTGGGCTTCAAAAAAAAAAA
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