DN621590

Overview
NameDN621590
Unique NameDN621590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METC_ARATH (Cystathionine beta-lyase, chloroplastic OS=Arabidopsis thaliana GN=At3g57050 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.097e-40
Identity = 87/240 (36.25%), Postives = 141/240 (58.75%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF 717
            L+ A+      SGM+A + +   L+  G  IV   D Y  +   +  V+P+ G+    ++   ++ + AA+      L + ESPTNP  +  D++ +S++ H +GA+V +D +  +P+  + L LGAD+V+HSATKFI GH+DV+AG ++   EKL  ++  L +  G  L P   +L +RG+KT+ LR+++Q   A ++A  L +HP+VK+V+Y GL  HP HH+   Q  G G V SF
Sbjct:  145 LDKADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQT-KLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSF 382          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: CGL_MOUSE (Cystathionine gamma-lyase OS=Mus musculus GN=Cth PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.127e-40
Identity = 88/243 (36.21%), Postives = 150/243 (61.73%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCI-DGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 723
            L+GA+ ++  ASG++A T+ +  L+ AG  I+   + Y  T  +   V  + G+  + +D +  + LEAA+      L + E+PTNP L+  D+   + + HK+G I+ + D TF +   Q+ L+LGAD+ + SATK++ GH+DV+ G +S  S+ L +++R L + LG   +P   YL  RG+KTL +R+++     + +A+ LE +P+V++V YPGL SHP+H +A +Q +G  G+VSF +
Sbjct:   77 LDGAKHSLAFASGLAA-TITITHLLKAGDEIICMDEVYGGTNRYFRRVASEFGLKISFVDCSKTKLLEAAITPQT-KLVWIETPTNPTLKLADIGACAQIVHKRGDIILVVDNTFMSAYFQRPLALGADICMCSATKYMNGHSDVVMGLVSVNSDDLNSRLRFLQNSLGAVPSPFDCYLCCRGLKTLQVRMEKHFKNGMAVARFLETNPRVEKVVYPGLPSHPQHELAKRQCSGCPGMVSFYI 317          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: CGL_RAT (Cystathionine gamma-lyase OS=Rattus norvegicus GN=Cth PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 4.530e-39
Identity = 88/243 (36.21%), Postives = 148/243 (60.91%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK-KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 723
            L+GA+  +  A G++A+T  +  L+ AG  ++   + Y  T  +   V  + G+  + +D +  + LEAA+      L + E+PTNP L+  D+K  + + HK K  I+ +D TF +   Q+ L+LGAD+ + SATK++ GH+DV+ G +S  S+ L  ++R L + LG   +P   YL  RG+KTL +R+++     + +A+ LE++P+V++V YPGL SHP+H +A +Q TG  G+VSF +
Sbjct:   77 LDGAKHCLTFARGLAATTT-ITHLLKAGDEVICMDEVYGGTNRYFRRVASEFGLKISFVDCSKTKLLEAAITPQT-KLVWIETPTNPTLKLADIKACAQIVHKHKDIILVVDNTFMSAYFQRPLALGADICMCSATKYMNGHSDVVMGLVSVTSDDLNERLRFLQNSLGAVPSPFDCYLCCRGLKTLQIRMEKHFRNGMAVARFLESNPRVEKVIYPGLPSHPQHELAKRQCTGCPGMVSFYI 317          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: CGL2_CAEEL (Putative cystathionine gamma-lyase 2 OS=Caenorhabditis elegans GN=cth-2 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.726e-39
Identity = 88/243 (36.21%), Postives = 146/243 (60.08%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETV-LPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA--IVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGC-ISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF 717
            LE A+   + +SG++A++  ++ L+  G HIV + D Y  T+ +I  V +P  G+    +D  D++ LE A+  N   ++F ESP+NP L+ VD+  V     K     +V +D TF +P  Q+ +SLGAD+V+HS TK+I GH+DV+ G  I+ +++    +  +   +G   +P   +L+ RG+KTLH+R++     AL +AK LEA+ +++ V YP L SHP+H +  +Q  G  G++SF
Sbjct:   67 LEDAKHCQVFSSGLAATSA-IINLLKYGDHIVCSDDVYGGTQRYIRRVAVPNHGLEVDSVDLTDVQNLEKAIKPNTKMVWF-ESPSNPLLKVVDIAAVVQTAKKANPEIVVVVDNTFMSPYFQRPISLGADVVVHSITKYINGHSDVVMGAVITDNDEFQQHLFFMQLAVGAVPSPFDCFLVNRGLKTLHIRMRAHYENALAVAKYLEANDRIESVLYPALPSHPQHEVHEKQTKGMSGMISF 307          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METC_RHIL3 (Putative cystathionine beta-lyase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=metC PE=3 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.721e-38
Identity = 83/239 (34.73%), Postives = 137/239 (57.32%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF 717
            LEG+  T+++ SG++A T+  L  V AG H +     Y  TR F +T+L ++G+      P    G+E  L  +N  L  TE+P +      D+  +S + H+ GA+V +D T+ATP+  + L  G D+ +H++TK+  GH+D+L G +S + +   +++  + VLG    P+ AY I+RG++T+ LR+++   +AL +AK LE    V RV +P L S P HH+  +   G  G+ SF
Sbjct:   76 LEGSAGTILVPSGLAAVTIPFLGFVAAGDHALVVDSVYGPTRHFCDTMLKRLGVEVEYYHPEIGAGIET-LFRSNTKLVHTEAPGSNTFEMQDIPAISAVAHRHGAVVMMDNTWATPVYFRPLDHGVDISIHASTKYPSGHSDILLGTVSANAEHWERLKEANGVLGICGAPDDAYQILRGLRTMGLRLERHYESALDIAKWLEGRDDVARVLHPALPSFPSHHLWKRDFKGASGIFSF 313          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METB_ECOLI (Cystathionine gamma-synthase OS=Escherichia coli (strain K12) GN=metB PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.995e-36
Identity = 87/245 (35.51%), Postives = 136/245 (55.51%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSE-KLVTQI---RNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 723
            LEG    V+  +GMSA  ++    +  G  +V   DCY  +    +++  +       +D  D + L AAL      L   ESP+NP LR VD+  +  L  + GA+  +D TF +P  Q  L+LGADLVLHS TK++ GH+DV+AG +   +  +VT++    N   V GGA +   +YL++RG++TL  R++     A  + K L+  P VK++++P L  +  H IA +Q  GFG ++SFE+
Sbjct:   64 LEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKP-KLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFD---SYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFEL 304          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: CYSA_STRCO (Putative cystathionine gamma-lyase OS=Streptomyces coelicolor GN=cysA PE=3 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.508e-34
Identity = 89/242 (36.78%), Postives = 133/242 (54.96%), Query Frame = 1
Query:    4 EGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGI---TATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEK-LVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF 717
            E    T++ ASGM+A + +L + + AG   V   D Y+   + +   L   GI   TA     A ++ L+ A       L + E+P+NP L   DV+ + +  H  GA+V +D T ATPL Q+ L LGAD  + S TK + GH DVL G ++G +   +  +R    ++G    P  A+L  R + TL LRV +Q+STAL++A+ L   P++  + YPGL   P H +A+QQM  +G VVSF
Sbjct:   86 EAGVETLVFASGMAAISSVLFSQLRAGDTAVLPDDGYQALPL-VRAQLEAYGIEVRTAPTGRDAQLDVLDGA------KLLWIETPSNPGLDVCDVRRLVEAAHAGGALVAVDNTLATPLGQRPLELGADFSVASGTKQLTGHGDVLLGYVAGRDAGAMAAVRRWRKIVGAIPGPMEAWLAHRSIATLQLRVDRQDSTALKVAEALRTRPEITGLRYPGLPDDPSHKVASQQMLRYGCVVSF 320          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: CYS3_YEAST (Cystathionine gamma-lyase OS=Saccharomyces cerevisiae GN=CYS3 PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 7.483e-34
Identity = 90/249 (36.14%), Postives = 142/249 (57.03%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGA----IVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEK-LVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPK-VKRVHYPGLKSHPEHHIATQQMTGF--GGVVSFEV 723
            LE A+  +  +SG SA+T  +L  +P G H V+  D Y  T  +   V    G+  +  +  D+      L   N  L + E+PTNP L+  D++ V+DL  K  A    I+ +D TF +P     L+ GAD+V+HSATK+I GH+DV+ G ++ + K L  +++ L + +G   +P  A+L  RG+KTLHLRV+Q   +A ++A+ L A  + V  V+YPGLK+HP + +  +Q      GG++SF +
Sbjct:   68 LENAQYGLAFSSG-SATTATILQSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN--DLLNDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRI 313          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METB_BACSU (Cystathionine gamma-synthase OS=Bacillus subtilis GN=metB PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.106e-32
Identity = 76/217 (35.02%), Postives = 128/217 (58.99%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAG-CISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPG 648
            LE     +  +SGM+A    ++AL  +G  ++ ++D Y  T    E    K G+T    D +D + L + +  N  ++F  E+PTNP ++  D++ ++ +  + G ++ +D TF TP+ Q+ L LGAD+V+HSATK++GGHND+LAG  +   E+L  ++    + +G  L P  ++L++RGMKTL LR++Q  + A  +A  LE   ++  V YPG
Sbjct:   64 LENGARGLAFSSGMAAIQT-IMALFKSGDELIVSSDLYGGTYRLFENEWKKYGLTFHYDDFSDEDCLRSKITPNTKAVF-VETPTNPLMQEADIEHIARITKEHGLLLIVDNTFYTPVLQRPLELGADIVIHSATKYLGGHNDLLAGLVVVKDERLGEEMFQHQNAIGAVLPPFDSWLLMRGMKTLSLRMRQHQANAQELAAFLEEQEEISDVLYPG 278          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: CYSD_SCHPO (O-acetylhomoserine (thiol)-lyase OS=Schizosaccharomyces pombe GN=SPBC428.11 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.556e-30
Identity = 86/275 (31.27%), Postives = 133/275 (48.36%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEK------------------------LVTQIRNLHHV----------LGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM-TGFGGVVSF 717
            LE   + +  +SG SA  + L  L  AG +IV+T+  Y  T    +  LP++GIT   ++  D   L A ++ N  ++ + ES  NP     D + ++++ H  G  + +D TF       + +  GAD+V HSATK+IGGH   + G I  S K                              NL +           +GG  NP   +L+++G++TL LR+++    A  +AK LE HPKV  V YPGL+SH  H +A + +  G+G V+SF
Sbjct:   75 LEHGAAAIATSSGTSALFMALTTLAKAGDNIVSTSYLYGGTYNLFKVTLPRLGITTKFVNGDDPNDLAAQIDENTKAV-YVESIGNPMYNVPDFERIAEVAHAAGVPLMVDNTFGGGGYLVRPIDHGADIVTHSATKWIGGHGTTIGGVIVDSGKFDWKKNSKRFPEFNEPHPGYHGMVFTETFGNLAYAFACRTQTLRDVGGNANPFGVFLLLQGLETLSLRMERHVQNAFALAKYLEKHPKVNWVSYPGLESHVSHKLAKKYLKNGYGAVLSF 348          
The following BLAST results are available for this feature:
BLAST of DN621590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
METC_ARATH4.097e-4036.25Cystathionine beta-lyase, chloroplastic OS=Arabido... [more]
CGL_MOUSE9.127e-4036.21Cystathionine gamma-lyase OS=Mus musculus GN=Cth P... [more]
CGL_RAT4.530e-3936.21Cystathionine gamma-lyase OS=Rattus norvegicus GN=... [more]
CGL2_CAEEL7.726e-3936.21Putative cystathionine gamma-lyase 2 OS=Caenorhabd... [more]
METC_RHIL31.721e-3834.73Putative cystathionine beta-lyase OS=Rhizobium leg... [more]
METB_ECOLI7.995e-3635.51Cystathionine gamma-synthase OS=Escherichia coli (... [more]
CYSA_STRCO1.508e-3436.78Putative cystathionine gamma-lyase OS=Streptomyces... [more]
CYS3_YEAST7.483e-3436.14Cystathionine gamma-lyase OS=Saccharomyces cerevis... [more]
METB_BACSU4.106e-3235.02Cystathionine gamma-synthase OS=Bacillus subtilis ... [more]
CYSD_SCHPO6.556e-3031.27O-acetylhomoserine (thiol)-lyase OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621590 ID=DN621590; Name=DN621590; organism=Citrus sinensis; type=EST; length=723bp
CTTGAGGGGGCTGAATCAACTGTGATTATGGCATCTGGAATGAGTGCTAG
CACAGTCATGTTGTTGGCATTGGTTCCAGCCGGTGGGCATATTGTGACAA
CCACTGATTGCTACAGGAAGACTAGGATTTTCATTGAGACTGTTCTGCCC
AAAATGGGAATCACGGCTACGGTGATTGACCCAGCTGATATGGAAGGTTT
GGAGGCAGCACTCAACAATAACAATGTCTCACTATTCTTCACCGAGTCTC
CAACCAATCCATTCCTGAGATGTGTGGATGTCAAACTGGTTTCAGATCTT
TGCCATAAGAAAGGAGCAATAGTTTGCATAGATGGAACCTTTGCCACACC
TCTCAATCAGAAGGCCCTCAGCCTTGGTGCTGATCTTGTACTGCACTCTG
CAACAAAATTCATTGGTGGCCACAATGATGTCCTTGCTGGGTGCATTAGT
GGTTCAGAGAAGTTAGTTACACAAATTCGTAATTTGCATCATGTTTTGGG
TGGTGCTCTCAACCCGAATGCCGCGTATTTGATCATTCGAGGCATGAAGA
CATTGCATCTTCGTGTACAGCAACAAAATTCAACTGCGTTGAGGATGGCC
AAGATTTTAGAGGCACATCCAAAGGTGAAGCGCGTTCACTATCCAGGCTT
GAAGAGTCATCCTGAGCATCACATTGCCACACAGCAAATGACTGGTTTTG
GTGGGGTAGTTAGTTTTGAGGTT
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