DN621590

Overview
NameDN621590
Unique NameDN621590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METC_YEAST (Putative cystathionine beta-lyase OS=Saccharomyces cerevisiae GN=IRC7 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.248e-29
Identity = 75/238 (31.51%), Postives = 124/238 (52.10%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVS 714
            L G   TV+ ASG+ + ++ LLAL  AG HI+ T   Y  TR+  + +L K G+     DP+  + +E  L   N ++ F ESP +  +   D+  +  +  K G    +D T+ATPL   A + G D+ + + TK++GGH+D+L G  S +E+    +R+ +  +          L +RGM+TLHLR+++    AL +A  L    +V++V +P  +  P H    +   G  G+ S
Sbjct:   74 LTGGAGTVLSASGLGSISLALLALSKAGDHILMTDSVYVPTRMLCDGLLAKFGVETDYYDPSIGKDIEK-LVKPNTTVIFLESPGSGTMEVQDIPALVSVAKKHGIKTILDNTWATPLFFDAHAHGIDISVEAGTKYLGGHSDLLIGLASANEECWPLLRSTYDAMAMLPGAEDCQLALRGMRTLHLRLKEVERKALDLAAWLGNRDEVEKVLHPAFEDCPGHEYWVRDYKGSSGLFS 310          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METB_HAEIN (Cystathionine gamma-synthase OS=Haemophilus influenzae GN=metB PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.248e-29
Identity = 76/217 (35.02%), Postives = 122/217 (56.22%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKT-RIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCI-SGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYP 645
            LE  +     +SGM+A  V L+ L  A    + ++D Y  T R+   +      +    ++ A    +EAA+N N  ++F  E+P+NP +   DV  ++ L  K   ++ +D TF TP+  + L LGAD+V+HS TK+I GHND L G I +  ++L  +I  + +  G  L+P  ++L IRGMKTL LR+++    A  +A+ L+A P+V+ V YP
Sbjct:   66 LENGDRGFAFSSGMAAIQV-LMTLFTAPDEWIVSSDVYGGTYRLLDFSYKNNNSVKPVYVNTASASAIEAAINPNTKAIFI-ETPSNPLMEECDVVEIAKLAKKHNLMLIVDNTFLTPVLSRPLDLGADVVIHSGTKYIAGHNDALVGLIVAKGQELCDRIAYIQNGAGAVLSPFDSWLTIRGMKTLSLRMKRHQENAQAIAEFLKAQPQVESVLYP 280          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: CYSD_EMENI (O-acetylhomoserine (thiol)-lyase OS=Emericella nidulans GN=cysD PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 7.248e-29
Identity = 88/277 (31.77%), Postives = 139/277 (50.18%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKL-----------VTQIRNLHH-----------------------VLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM-TGFGGVVSFEV 723
            LEG  + V  +SG +A  + + AL  AG +IV+T++ Y  T    + + P++GIT   +     E + AA+++   +++  E+  NP     D ++++ + H+KG  + +D TF A     + +  GAD+V+HSATK+IGGH   + G +  S K             TQ    +H                        LG ALNP AA  +I G++TL LR ++  S AL +A  L+ +  V  V Y GL+ H  H +A + +  GFGGV+SF V
Sbjct:   76 LEGGVAAVAASSGQAAQFMAISALAHAGDNIVSTSNLYGGTYNQFKVLFPRLGITTKFVQGDKAEDIAAAIDDRTKAVY-VETIGNPRYNVPDFEVIAKVAHEKGIPLVVDNTFGAGGYFVRPIEHGADIVVHSATKWIGGHGTTIGGVVVDSGKFDWGKNAARFPQFTQPSEGYHGLNFWETFGPIAFAIRVRVEILRDLGSALNPFAAQQLILGLETLSLRAERHASNALALANWLKKNDHVSWVSYVGLEEHSSHEVAKKYLKRGFGGVLSFGV 351          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METC_HAEIN (Cystathionine beta-lyase OS=Haemophilus influenzae GN=metC PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.754e-28
Identity = 70/243 (28.81%), Postives = 127/243 (52.26%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 723
            +EG     +   G +A T  +L+ V  G H++ +   Y  T+ F   VL KM I  T  DP   E + A L   N  + F E+P++  +   D+  +     K     ++ ID T++  +  KAL    D+ + + TK++ GH+D++ G    + +   Q+R   +++G  ++ ++AY   RG++TL +R++Q   +++++AK L   P+VK V++P L S P H    +  +G  G+ SFE+
Sbjct:   75 MEGGAGCYLYPCGTAAVTNSILSFVKTGDHVLMSGAAYEPTQYFCNIVLKKMQIDITYYDPLIGEDI-ATLIQPNTKVLFLEAPSSITMEIPDIPTIVKAARKVNPNIVIMIDNTWSAGVLFKALEHDIDISIQAGTKYLVGHSDIMIGTAVANARTWDQLREHSYLMGQMVDADSAYTTARGIRTLGVRLKQHQESSIKVAKWLSEQPEVKTVYHPALPSCPGHEFFLRDFSGSSGLFSFEL 316          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METC_ECOLI (Cystathionine beta-lyase metC OS=Escherichia coli (strain K12) GN=metC PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.597e-28
Identity = 72/241 (29.88%), Postives = 125/241 (51.87%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHK--KGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF 717
            LEG    V+   G +A    +LA +  G H++ T   Y  ++ F   +L K+G+T +  DP     +   L  N   + F ESP +  +   DV  +          AI+ ID T+A  +  KAL  G D+ + +ATK++ GH+D + G    + +   Q+R   +++G  ++ + AY+  RG++TL +R++Q + ++L++A+ L  HP+V RV++P L     H    +  TG  G+ SF
Sbjct:   74 LEGGAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNT-KIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSF 313          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: MET17_KLULA (Protein MET17 OS=Kluyveromyces lactis GN=MET17 PE=3 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 1.047e-27
Identity = 89/277 (32.13%), Postives = 132/277 (47.65%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEK---------------------------------LVTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQM-TGFGGVVSFEV 723
            LEG  + +  +SG +A T+ +  L   G +IV+T+  Y  T    +    ++GI A  +D    E  E   +    +L+  ES  NP     D + +  + HK G  V +D TF A     + +  GAD+V HSATK+IGGH   + G I  S K                                  +  +R  L   LG  L+P A +L+++G++TL LR ++  S AL++A+ LE+ P V  V YPGL SH  H  A + +  GFGGV+SF V
Sbjct:   73 LEGGIAALATSSGQAAQTLAVTGLAHTGDNIVSTSFLYGGTYNQFKVAFKRLGIEARFVDGDKPEDFEKLFDEKTKALYL-ESIGNPKYNVPDFEKIVAVAHKHGIPVVVDNTFGAGGFFCQPIKYGADIVTHSATKWIGGHGVTVGGVIIDSGKFPWKDYPEKFPQFSQPSEGYHGLIFNDAFGPAAFIGHVRTELLRDLGPVLSPFAGFLLLQGLETLSLRGERHGSNALKLAQYLESSPYVSWVSYPGLPSHSHHENAKKYLENGFGGVLSFGV 348          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: MET17_YEAST (Protein MET17 OS=Saccharomyces cerevisiae GN=MET17 PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 1.785e-27
Identity = 86/277 (31.05%), Postives = 133/277 (48.01%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTF-ATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKL---------------------------------VTQIR-NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMT-GFGGVVSFEV 723
            LEG  + + ++SG +A T+ +  L   G +IV+T+  Y  T    +    + GI A  ++  + E  E   +    +++  E+  NP     D + +  + HK G  V +D TF A     + +  GAD+V HSATK+IGGH   + G I  S K                                  +  +R  L   LG  +NP A++L+++G++TL LR ++    AL++AK LE  P V  V YPGL SH  H  A + ++ GFGGV+SF V
Sbjct:   74 LEGGAAALAVSSGQAAQTLAIQGLAHTGDNIVSTSYLYGGTYNQFKISFKRFGIEARFVEGDNPEEFEKVFDERTKAVYL-ETIGNPKYNVPDFEKIVAIAHKHGIPVVVDNTFGAGGYFCQPIKYGADIVTHSATKWIGGHGTTIGGIIVDSGKFPWKDYPEKFPQFSQPAEGYHGTIYNEAYGNLAYIVHVRTELLRDLGPLMNPFASFLLLQGVETLSLRAERHGENALKLAKWLEQSPYVSWVSYPGLASHSHHENAKKYLSNGFGGVLSFGV 349          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METC_SALTY (Cystathionine beta-lyase OS=Salmonella typhimurium GN=metC PE=3 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.511e-26
Identity = 69/241 (28.63%), Postives = 121/241 (50.21%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSF 717
            LEG     +   G +A    +LA V  G HI+ T   Y  ++ F   +L K+G+T +  DP     +   +  N   + F ESP +  +   D+  +     +    A++ ID T+A  +  KAL    D+ + + TK++ GH+D + G    + +   Q+R   +++G  L+ + AY+  RG++TL +R++Q   ++L++A  L  HP+V RV++P L     H    +  TG  G+ SF
Sbjct:   74 LEGGAGCALFPCGAAAVANTILAFVEQGDHILMTNTAYEPSQDFCSKILGKLGVTTSWFDPLIGADITQHIQPNT-KVVFLESPGSITMEVHDIPSIVSAVRRVAPEAVIMIDNTWAAGVLFKALEFDIDISIQAGTKYLIGHSDAMVGTAVANARCWEQLRENAYLMGQMLDADTAYMTSRGLRTLGVRLRQHQESSLKIAAWLANHPQVARVNHPALPGSKGHAFWKRDFTGSSGLFSF 313          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: METC_BORAV (Cystathionine beta-lyase OS=Bordetella avium GN=metC PE=1 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24
Identity = 62/243 (25.51%), Postives = 129/243 (53.09%), Query Frame = 1
Query:    1 LEGAESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDP-ADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCI-SGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEV 723
            LEG     + +SG++  +++ L+L+ AG H +     Y       E VL ++GI  T  D  AD+    A+L      L F E+P +     +D+  ++    +   I+  D T+ +    + L+LGA + + + TK++GGH+D++ G + +  E +  ++    + LG +++ + A+L +RG++T+ +R+ Q    AL + + L+  P+V R+++P   + P H +  +  +G  G+++ ++
Sbjct:   82 LEGGTHCYLASSGLAGISMVFLSLLSAGEHALVADCAYGPVHELHEAVLSRLGIDVTFFDAKADL----ASLVRPTTRLIFAEAPGSLLFEMLDMPALARFAKQHDLILATDNTWGSGYIYRPLTLGAQVSVIAGTKYVGGHSDLMLGAVVTNDEAIAKRLNRTQYALGYSVSADDAWLALRGVRTMPVRMAQHARHALEVCEFLQNRPEVVRLYHPAWPADPGHALWQRDCSGSNGMLAVQL 320          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: CBL_SCHPO (Cystathionine beta-lyase OS=Schizosaccharomyces pombe GN=str3 PE=2 SV=4)

HSP 1 Score: 105.916 bits (263), Expect = 2.258e-22
Identity = 65/217 (29.95%), Postives = 118/217 (54.38%), Query Frame = 1
Query:   10 AESTVIMASGMSASTVMLLALVPAGGHIVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKG--AIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCI-SGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGL 651
            A+   + ++GMSA   M+L    +  H+V   D Y  +   +     + G     +D +D+   EAAL  +  +L   ESPTNP +   D++ +  +   K   A++ +D T  +P+    L  G D+V  SATK++ GH+D++ G I + S+++   +    + +G A+ P   +L++RG+KT+ LRV++    A+ +AK L++  K  +V++PGL
Sbjct:   70 AKHAFVTSNGMSALD-MILRCCKSNSHVVAGHDLYGGSDRLLSFNQRQYGFKVDNVDTSDLAAFEAALRPDT-NLVLIESPTNPRISICDIRAIVKITRSKAKDALLVMDNTMLSPVLCNPLDFGYDIVYESATKYLSGHHDLMGGVIATKSDEIAKSVFFNINAMGAAMAPFECFLLLRGIKTMGLRVERAQQNAIEIAKFLKS--KGLQVNFPGL 282          
The following BLAST results are available for this feature:
BLAST of DN621590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
METC_YEAST7.248e-2931.51Putative cystathionine beta-lyase OS=Saccharomyces... [more]
METB_HAEIN7.248e-2935.02Cystathionine gamma-synthase OS=Haemophilus influe... [more]
CYSD_EMENI7.248e-2931.77O-acetylhomoserine (thiol)-lyase OS=Emericella nid... [more]
METC_HAEIN2.754e-2828.81Cystathionine beta-lyase OS=Haemophilus influenzae... [more]
METC_ECOLI3.597e-2829.88Cystathionine beta-lyase metC OS=Escherichia coli ... [more]
MET17_KLULA1.047e-2732.13Protein MET17 OS=Kluyveromyces lactis GN=MET17 PE=... [more]
MET17_YEAST1.785e-2731.05Protein MET17 OS=Saccharomyces cerevisiae GN=MET17... [more]
METC_SALTY1.511e-2628.63Cystathionine beta-lyase OS=Salmonella typhimurium... [more]
METC_BORAV7.021e-2425.51Cystathionine beta-lyase OS=Bordetella avium GN=me... [more]
CBL_SCHPO2.258e-2229.95Cystathionine beta-lyase OS=Schizosaccharomyces po... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06O18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621590 ID=DN621590; Name=DN621590; organism=Citrus sinensis; type=EST; length=723bp
CTTGAGGGGGCTGAATCAACTGTGATTATGGCATCTGGAATGAGTGCTAG
CACAGTCATGTTGTTGGCATTGGTTCCAGCCGGTGGGCATATTGTGACAA
CCACTGATTGCTACAGGAAGACTAGGATTTTCATTGAGACTGTTCTGCCC
AAAATGGGAATCACGGCTACGGTGATTGACCCAGCTGATATGGAAGGTTT
GGAGGCAGCACTCAACAATAACAATGTCTCACTATTCTTCACCGAGTCTC
CAACCAATCCATTCCTGAGATGTGTGGATGTCAAACTGGTTTCAGATCTT
TGCCATAAGAAAGGAGCAATAGTTTGCATAGATGGAACCTTTGCCACACC
TCTCAATCAGAAGGCCCTCAGCCTTGGTGCTGATCTTGTACTGCACTCTG
CAACAAAATTCATTGGTGGCCACAATGATGTCCTTGCTGGGTGCATTAGT
GGTTCAGAGAAGTTAGTTACACAAATTCGTAATTTGCATCATGTTTTGGG
TGGTGCTCTCAACCCGAATGCCGCGTATTTGATCATTCGAGGCATGAAGA
CATTGCATCTTCGTGTACAGCAACAAAATTCAACTGCGTTGAGGATGGCC
AAGATTTTAGAGGCACATCCAAAGGTGAAGCGCGTTCACTATCCAGGCTT
GAAGAGTCATCCTGAGCATCACATTGCCACACAGCAAATGACTGGTTTTG
GTGGGGTAGTTAGTTTTGAGGTT
back to top