DN621590

Overview
NameDN621590
Unique NameDN621590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: STR3_YEAST (Cystathionine beta-lyase OS=Saccharomyces cerevisiae GN=STR3 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.121e-21
Identity = 74/256 (28.91%), Postives = 126/256 (49.22%), Query Frame = 1
Query:   13 ESTVIMASGMSASTVMLLALVPAGGH------IVTTTDCYRKTRIFIETVLPKMGITATVIDPADMEGLEAALNN-NNVSLFFTESPTNPFLRCVDVKLVSDL--CHKKGAIVCIDGTFATPLNQKALSL--GADLVLHSATKFIGGHNDVLAGCI-SGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILE--------AHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFE 720
            E+ + ++SGM+A  V+L  LV   G       I+   D Y  T+  +     +    +  +D +D E  +    + + V     ESPTNP  + VD+  +     C      V +D T  + LN   L L  G D+V  SATK++ GH+D++ G I S + ++ +++  + +  G  L+P  ++L++RG+KTL +R+ QQ   A+ +A  LE           K  +  + GL+S+P+  +      G G V+SFE
Sbjct:   71 ENVLAVSSGMTALDVILRGLVLLNGTDNHTPTIIAGDDLYGGTQRLLNFFKQQSHAVSVHVDTSDFEKFKTVFQSLDKVDCVLLESPTNPLCKVVDIPRILRFVKCISPDTTVVVDNTMMSGLNCNPLQLNPGCDVVYESATKYLNGHHDLMGGVIISKTPEIASKLYFVINSTGAGLSPMDSWLLVRGLKTLGVRLYQQQRNAMILAHWLENSCGFKPTRTNKATKTRFVGLRSNPDFKLHKSFNNGPGAVLSFE 326          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: YHR2_YEAST (Uncharacterized trans-sulfuration enzyme YHR112C OS=Saccharomyces cerevisiae GN=YHR112C PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.052e-19
Identity = 53/184 (28.80%), Postives = 105/184 (57.07%), Query Frame = 1
Query:  175 IDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEKLVT-QIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPK-----VKRVHYPGLKSHPEHHIATQQMTGFGGV 708
            I+   +E +E   +  ++     ESP NP+    D++ ++   H KGA++ +D TFA+P  Q A + GAD+VL+SATK+ GGH+D+L+G +   E+  + Q+++    LG  +    +++++R ++T  +R+ +Q+  A ++ + L  H       +K +++  L++  E  +  Q + G+G V
Sbjct:  123 IEQHPLEDIEKCASEGDI--VHLESPVNPYGTSSDIESLARRAHAKGALLIVDSTFASPPLQYAWNFGADIVLYSATKYFGGHSDLLSGVLVVKEEATSRQLKDDRIYLGTNVANLESFMLLRSLRTYEMRITKQSENATKLVRFLSDHQSEFDKVLKTIYHSSLQT--EEFVKKQLVGGYGPV 302          
BLAST of DN621590 vs. ExPASy Swiss-Prot
Match: YFHE_SCHPO (Uncharacterized trans-sulfuration enzyme C23A1.14c OS=Schizosaccharomyces pombe GN=SPAC23A1.14c PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.881e-19
Identity = 52/148 (35.14%), Postives = 86/148 (58.11%), Query Frame = 1
Query:  169 TVIDPADMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGCISGSEK-LVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKIL 609
            T ++ + ++G   A+   +V   + E+P NP     D+    +L  KKGAI+ +D TFA P  Q AL LGAD V+HSATK++ GH+DVLAG  +  ++  +  ++     LG  L+P  A+L++R ++T  LR+ + +     +A+ L
Sbjct:  135 TGLETSFIDGKCDAIGEGDV--IWLETPLNPLGIAFDIPFYKELAKKKGAILVVDSTFAPPPIQDALVLGADYVVHSATKYLAGHSDVLAGVTASKDRSKILDLKADRAYLGTILHPQQAFLLLRSLRTFPLRIAKHSENGFLVAQHL 280          
The following BLAST results are available for this feature:
BLAST of DN621590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
STR3_YEAST1.121e-2128.91Cystathionine beta-lyase OS=Saccharomyces cerevisi... [more]
YHR2_YEAST3.052e-1928.80Uncharacterized trans-sulfuration enzyme YHR112C O... [more]
YFHE_SCHPO8.881e-1935.14Uncharacterized trans-sulfuration enzyme C23A1.14c... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621590 ID=DN621590; Name=DN621590; organism=Citrus sinensis; type=EST; length=723bp
CTTGAGGGGGCTGAATCAACTGTGATTATGGCATCTGGAATGAGTGCTAG
CACAGTCATGTTGTTGGCATTGGTTCCAGCCGGTGGGCATATTGTGACAA
CCACTGATTGCTACAGGAAGACTAGGATTTTCATTGAGACTGTTCTGCCC
AAAATGGGAATCACGGCTACGGTGATTGACCCAGCTGATATGGAAGGTTT
GGAGGCAGCACTCAACAATAACAATGTCTCACTATTCTTCACCGAGTCTC
CAACCAATCCATTCCTGAGATGTGTGGATGTCAAACTGGTTTCAGATCTT
TGCCATAAGAAAGGAGCAATAGTTTGCATAGATGGAACCTTTGCCACACC
TCTCAATCAGAAGGCCCTCAGCCTTGGTGCTGATCTTGTACTGCACTCTG
CAACAAAATTCATTGGTGGCCACAATGATGTCCTTGCTGGGTGCATTAGT
GGTTCAGAGAAGTTAGTTACACAAATTCGTAATTTGCATCATGTTTTGGG
TGGTGCTCTCAACCCGAATGCCGCGTATTTGATCATTCGAGGCATGAAGA
CATTGCATCTTCGTGTACAGCAACAAAATTCAACTGCGTTGAGGATGGCC
AAGATTTTAGAGGCACATCCAAAGGTGAAGCGCGTTCACTATCCAGGCTT
GAAGAGTCATCCTGAGCATCACATTGCCACACAGCAAATGACTGGTTTTG
GTGGGGTAGTTAGTTTTGAGGTT
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