DN621563

Overview
NameDN621563
Unique NameDN621563
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621563 vs. ExPASy Swiss-Prot
Match: THI4_YEAST (Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.504e-43
Identity = 86/140 (61.43%), Postives = 110/140 (78.57%), Query Frame = 1
Query:  244 DLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDL 660
            D + FKF PI+ES VSR MT RY  D+  +A +D    GAGS+GLS AY ++KN P++++ IIE SV+PGGG+WLGGQLFSAMV+RKPAH+FL EL I Y+++ +YVV+KHAALF ST++SK+L  PNVKLFNA   EDL
Sbjct:   34 DWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDL 173          
BLAST of DN621563 vs. ExPASy Swiss-Prot
Match: THI4_PYRHO (Putative thiazole biosynthetic enzyme OS=Pyrococcus horikoshii GN=PH1357 PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.732e-15
Identity = 46/130 (35.38%), Postives = 73/130 (56.15%), Query Frame = 1
Query:  271 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDL 660
            ++E  ++R +   Y  D++   + D    GAG +G+  AY L+K    ++AI E+ +S GGG W GG  F+ +VV+  A   LDE GI Y+E +    +  A    +TI SK++ +  VK+FN +  EDL
Sbjct:    2 LREVTITRAIVESYYRDLLNNLELDVAIVGAGPSGMVAAYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKVVVQDEAREILDEFGIRYEEFEKGYYVADAIEVATTIASKVV-KSGVKIFNMIEVEDL 129          
BLAST of DN621563 vs. ExPASy Swiss-Prot
Match: THI4_PYRFU (Putative thiazole biosynthetic enzyme OS=Pyrococcus furiosus GN=PF1530 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15
Identity = 46/130 (35.38%), Postives = 72/130 (55.38%), Query Frame = 1
Query:  271 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDL 660
            +K+ ++SR +   Y  D++   + D    GAG +G+   Y L+K    ++AI E+ +S GGG W GG  F+ +VV++ A   LDE  I Y+E +    +  A    +TI SK + +  VK+FN V  EDL
Sbjct:    2 LKDVVISRAIVESYFKDLLNNLELDVAIVGAGPSGMVAGYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKIVVQEEAKEILDEFDIRYEEFEKGYYVADAIEVATTIASKTV-KAGVKIFNMVEVEDL 129          
BLAST of DN621563 vs. ExPASy Swiss-Prot
Match: THI4_PYRAB (Putative thiazole biosynthetic enzyme OS=Pyrococcus abyssi GN=PYRAB07910 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.583e-15
Identity = 46/130 (35.38%), Postives = 72/130 (55.38%), Query Frame = 1
Query:  271 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDL 660
            ++E  +SR +   Y  D++   + D    GAG +G+  AY L+K    ++AI E+ +S GGG W GG  F+ +VV++ A   LDE  I Y+E +    +  A    +TI SK + +  VK+FN +  EDL
Sbjct:    2 LREVTISRAIIESYYRDLLNNLELDVAIVGAGPSGMVAAYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKVVVQEEAREILDEFDIRYEEFEKGYYVADAIEVATTIASKTV-KAGVKIFNMIEVEDL 129          
BLAST of DN621563 vs. ExPASy Swiss-Prot
Match: THI4_PYRKO (Putative thiazole biosynthetic enzyme OS=Pyrococcus kodakaraensis GN=TK0434 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.123e-14
Identity = 44/130 (33.85%), Postives = 70/130 (53.85%), Query Frame = 1
Query:  271 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDL 660
            ++E  +SR +   Y  D++     D    GAG +G+   Y L+K    ++AI E+ +S GGG W G   F+ +VV++ A   LDE G+DY +  N + +  +    ST+ SK + +   K+FN V  EDL
Sbjct:    1 MREIEISRAIVEAYFNDLLQNLQLDIAIVGAGPSGMVAGYYLAKG-GAKVAIFEKKLSVGGGIWGGAMGFNRVVVQESAREILDEFGVDYSQVGNGLYVLDSIELASTLASKAV-KAGAKIFNMVEVEDL 128          
BLAST of DN621563 vs. ExPASy Swiss-Prot
Match: THI4_THEMA (Putative thiazole biosynthetic enzyme OS=Thermotoga maritima GN=TM_0787 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.466e-14
Identity = 41/130 (31.54%), Postives = 78/130 (60.00%), Query Frame = 1
Query:  271 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDL 660
            +++ ++SR +  RY   +    + D    GAG +GL+ AYEL+KN   ++A+ E+  +PGGG W GG +F+ +V+ K    FL E+ I+Y+ +++++V+  +  F S ++ +   +    +FN V+ ED+
Sbjct:    3 MRDVLISRLIVERYFEKLRNSLELDVAIVGAGPSGLTAAYELAKN-GFRVAVFEERNTPGGGIWGGGMMFNEIVLEKELENFLKEVEIEYEVKEDHIVV-DSVHFASGLLYR-ATKAGAIVFNNVSVEDV 129          
BLAST of DN621563 vs. ExPASy Swiss-Prot
Match: THI4_METTH (Putative thiazole biosynthetic enzyme OS=Methanobacterium thermoautotrophicum GN=MTH_1620 PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.267e-14
Identity = 44/134 (32.84%), Postives = 74/134 (55.22%), Query Frame = 1
Query:  259 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDL 660
            K D IK   +SR +   YM D++ Y + D    G G +GL+  Y L++   +++A+ E+ +S GGG W GG +F+ +VV+      LDE GI  +  D    +  +   TST+ S+   +  +K+FN ++ ED+
Sbjct:    2 KLDDIK---ISRAIVEGYMEDLLDYMEMDVAIGGGGPSGLTAGYYLAR-AGLKVALFERKLSIGGGMWGGGMMFNKIVVQDEGREILDEFGIRSEPYDEGYHVADSVEATSTLCSR-ACQAGLKIFNLMSIEDV 130          
BLAST of DN621563 vs. ExPASy Swiss-Prot
Match: THI4_HALSA (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarium GN=VNG_2604G PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.812e-12
Identity = 38/107 (35.51%), Postives = 63/107 (58.88%), Query Frame = 1
Query:  262 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI--DYDEQDNYVVIKHA 576
            F    E+ V+R +TR++  + +   +TD    G G +GL  A EL+   ++ + IIE++   GGG WLGG L + + VR PA   LD+LG+  +YDE+++ + +  A
Sbjct:    6 FADANEAEVTRAITRQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVADA 111          
BLAST of DN621563 vs. ExPASy Swiss-Prot
Match: THI4_HALS3 (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE4651F PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.812e-12
Identity = 38/107 (35.51%), Postives = 63/107 (58.88%), Query Frame = 1
Query:  262 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI--DYDEQDNYVVIKHA 576
            F    E+ V+R +TR++  + +   +TD    G G +GL  A EL+   ++ + IIE++   GGG WLGG L + + VR PA   LD+LG+  +YDE+++ + +  A
Sbjct:    6 FADANEAEVTRAITRQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVADA 111          
BLAST of DN621563 vs. ExPASy Swiss-Prot
Match: THI4_ARCFU (Putative thiazole biosynthetic enzyme OS=Archaeoglobus fulgidus GN=AF_0702 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.415e-11
Identity = 42/137 (30.66%), Postives = 73/137 (53.28%), Query Frame = 1
Query:  259 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLAR---PNVKLFNAVAAEDL 660
            KF  + E+ +++ +      + + YA++D    GAG +GL+ A  L++   ++  ++E+ +S GGG   GG LF  +VV + A   LD+ GI Y E  N++V   A       M+KL A+      K+ + V+ ED+
Sbjct:    4 KFTEVMEAEITKAIVETASEEWVEYAESDVIVVGAGPSGLTAARYLAEK-GLKTLVLERRLSFGGGIGGGGMLFHKVVVEREAKDILDDFGIRYTEHRNFLVADSA-----EFMAKLAAKAIDAGAKIIHGVSVEDV 134          
The following BLAST results are available for this feature:
BLAST of DN621563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
THI4_YEAST1.504e-4361.43Thiazole biosynthetic enzyme, mitochondrial OS=Sac... [more]
THI4_PYRHO1.732e-1535.38Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_PYRFU3.859e-1535.38Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_PYRAB6.583e-1535.38Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_PYRKO1.123e-1433.85Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_THEMA1.466e-1431.54Putative thiazole biosynthetic enzyme OS=Thermotog... [more]
THI4_METTH3.267e-1432.84Putative thiazole biosynthetic enzyme OS=Methanoba... [more]
THI4_HALSA6.812e-1235.51Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_HALS36.812e-1235.51Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_ARCFU4.415e-1130.66Putative thiazole biosynthetic enzyme OS=Archaeogl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O04_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621563 ID=DN621563; Name=DN621563; organism=Citrus sinensis; type=EST; length=660bp
TGCAAATCAAATTACTTCTCATTATCAAACTTCTAAGCAGCAGGGGAAGG
AGGGGTAAAAAAAAAAACCATGGCAGCCATGGCTTCTACAGCTTTCGCTC
CTTCAGTTTCGTCCACCACCAATAAGCTCTTTGACTCATCCTTTCATGGG
GCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCCATCAAATCTTCTCG
TCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGACTTGA
ACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTGAAATG
ACACGCAGGTACATGACGGACATGATCACTTATGCTGACACTGATGTGGT
AGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCTCAGCA
AAAACCCCAACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCCCGGC
GGTGGCGCGTGGCTCGGTGGACAGCTCTTCTCTGCCATGGTTGTGCGCAA
ACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGACTACGATGAGCAAG
ACAACTATGTTGTGATCAAGCATGCAGCGCTGTTCACCTCCACTATAATG
AGCAAGCTCCTGGCCCGCCCCAACGTCAAGCTCTTTAATGCAGTGGCAGC
CGAGGACTTG
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