DN621563

Overview
NameDN621563
Unique NameDN621563
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621563 vs. ExPASy Swiss-Prot
Match: THI4_HALWD (Putative thiazole biosynthetic enzyme OS=Haloquadratum walsbyi (strain DSM 16790) GN=HQ1276A PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.767e-11
Identity = 35/98 (35.71%), Postives = 56/98 (57.14%), Query Frame = 1
Query:  259 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQD 552
            +F  + E+ V+R + + +  + I   DT+    G G +GL  A EL++   + + I+E++   GGG WLGG L + + VR PA   LDEL + Y+E D
Sbjct:    5 EFADVSEAQVTRAIAKDWGNEFIDRVDTEVIIVGGGPSGLVTAKELAER-GVDVTIVEKNNYLGGGFWLGGFLMNKVTVRDPAQSVLDELDVPYEESD 101          
BLAST of DN621563 vs. ExPASy Swiss-Prot
Match: THI4_METAC (Putative thiazole biosynthetic enzyme OS=Methanosarcina acetivorans GN=MA_2851 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.531e-11
Identity = 41/133 (30.83%), Postives = 69/133 (51.88%), Query Frame = 1
Query:  271 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDL 660
            + E I++R +   Y    + Y D D    G G A L  A  L++   +++A+ EQ +S GGG W GG +F  +VV++ A   LD+ GI Y E ++   + ++       + KL+A       ++FN V+ ED+
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTDIDVALVGGGPANLVAAKYLAE-AGVKVALYEQKLSLGGGMWAGGMMFPRIVVQEEATRILDDFGIRYKEYESGYYVANSV----ESVGKLIAGATSAGAEVFNLVSFEDI 130          
The following BLAST results are available for this feature:
BLAST of DN621563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
THI4_HALWD5.767e-1135.71Putative thiazole biosynthetic enzyme OS=Haloquadr... [more]
THI4_METAC7.531e-1130.83Putative thiazole biosynthetic enzyme OS=Methanosa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O04_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621563 ID=DN621563; Name=DN621563; organism=Citrus sinensis; type=EST; length=660bp
TGCAAATCAAATTACTTCTCATTATCAAACTTCTAAGCAGCAGGGGAAGG
AGGGGTAAAAAAAAAAACCATGGCAGCCATGGCTTCTACAGCTTTCGCTC
CTTCAGTTTCGTCCACCACCAATAAGCTCTTTGACTCATCCTTTCATGGG
GCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCCATCAAATCTTCTCG
TCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGACTTGA
ACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTGAAATG
ACACGCAGGTACATGACGGACATGATCACTTATGCTGACACTGATGTGGT
AGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCTCAGCA
AAAACCCCAACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCCCGGC
GGTGGCGCGTGGCTCGGTGGACAGCTCTTCTCTGCCATGGTTGTGCGCAA
ACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGACTACGATGAGCAAG
ACAACTATGTTGTGATCAAGCATGCAGCGCTGTTCACCTCCACTATAATG
AGCAAGCTCCTGGCCCGCCCCAACGTCAAGCTCTTTAATGCAGTGGCAGC
CGAGGACTTG
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