DN621561

Overview
NameDN621561
Unique NameDN621561
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK_RALEJ (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain JMP134) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.075e-50
Identity = 106/203 (52.22%), Postives = 137/203 (67.49%), Query Frame = 2
Query:   80 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 688
            FLFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VA ET   T LV++ GEITT ANV+Y ++ RDT + IG+ + + G+D   C VLV  ++QSPDIAQGV    S      GAGDQG MFGYA DETPE MP     + +L  + +++R++G  PWLRPD K+QVTV Y +      P  V TV++STQH   +T  +I
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAVLDAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV-DRASDDYLNQGAGDQGLMFGYACDETPELMPFPIYYSHRLVERQSQLRRDGRLPWLRPDAKSQVTVRYVDGR----PHSVDTVVLSTQHAPDITQAQI 202          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK_LEPCP (S-adenosylmethionine synthetase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.075e-50
Identity = 105/194 (54.12%), Postives = 134/194 (69.07%), Query Frame = 2
Query:   80 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH 661
            FLFTSESV+EGHPDK+ DQISDAILDA  EQDP S+VA ET T T LV++ GEITT A+V+Y ++ RDT + IG+ + + G+D   C VLV  ++QS DIAQGV  H S      GAGDQG MFGYA DETPE MP     A +L  +  ++RK+G  P+LRPD K+QVT+ Y +      P  + T+++STQH
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAIFEQDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSNDIAQGV-DHASDDHLNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGRLPFLRPDAKSQVTMRYVDGK----PHSIDTIVLSTQH 193          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK_DESVV (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.075e-50
Identity = 103/203 (50.74%), Postives = 136/203 (67.00%), Query Frame = 2
Query:   80 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 688
            + FTSESV EGHPDK+ DQISDA+LD  L QDP+S+VACET   T + ++ GEITT+   +   +VR+T RNIG+ S ++G D   C V+  I++QS DIAQGV    +   E+ GAGDQG MFG+A DET   MP     A QL  +LTEVRK+GT    RPDGKTQV+ EY +      PVR++ V++STQH ++ +  +I
Sbjct:    8 YYFTSESVTEGHPDKVADQISDAVLDVLLAQDPNSRVACETLVTTGMAVIAGEITTRGYADLPHVVRETIRNIGYNSSEMGFDWQTCAVISSIDKQSADIAQGVDRATN---EDQGAGDQGMMFGFACDETATLMPAPIYWAHQLSQRLTEVRKDGTVDIFRPDGKTQVSFEYVDGK----PVRINNVVVSTQHKDSASQADI 203          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK_DESVH (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.075e-50
Identity = 103/203 (50.74%), Postives = 136/203 (67.00%), Query Frame = 2
Query:   80 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 688
            + FTSESV EGHPDK+ DQISDA+LD  L QDP+S+VACET   T + ++ GEITT+   +   +VR+T RNIG+ S ++G D   C V+  I++QS DIAQGV    +   E+ GAGDQG MFG+A DET   MP     A QL  +LTEVRK+GT    RPDGKTQV+ EY +      PVR++ V++STQH ++ +  +I
Sbjct:    8 YYFTSESVTEGHPDKVADQISDAVLDVLLAQDPNSRVACETLVTTGMAVIAGEITTRGYADLPHVVRETIRNIGYNSSEMGFDWQTCAVISSIDKQSADIAQGVDRATN---EDQGAGDQGMMFGFACDETATLMPAPIYWAHQLSQRLTEVRKDGTVDIFRPDGKTQVSFEYVDGK----PVRINNVVVSTQHKDSASQADI 203          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK_STRU0 (S-adenosylmethionine synthetase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=metK PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.321e-50
Identity = 111/211 (52.61%), Postives = 142/211 (67.30%), Query Frame = 2
Query:   74 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 688
            E  LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ET   T  V VFGEI+T A V+  ++VRDT   IG+ + + G  A++  V   + +QS DIAQGV+  L  R  +      IGAGDQG MFG+A DETPE MPL   L+ +L  KL ++RK+G   +LRPD K+QVTVEY + +    PVRV TV+ISTQHD  V+ + I
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETVVYTGSVHVFGEISTSAYVDINRVVRDTIAEIGYTNAEYGFSANSVGVHPSLVEQSTDIAQGVNEALEAREGQKDDLNLIGAGDQGLMFGFAIDETPELMPLPISLSHKLVKKLADLRKSGDITYLRPDAKSQVTVEYDDND---QPVRVDTVVISTQHDPEVSQETI 210          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK_POLSQ (S-adenosylmethionine synthetase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.950e-50
Identity = 103/203 (50.74%), Postives = 141/203 (69.46%), Query Frame = 2
Query:   80 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 688
            + FTSESV+EGHPDK+ DQISDAILDA L QDP ++VA ET   T LV++ GEITT ANV+Y ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DET E MP+   L+ +L  + +++R++G   WLRPD K+QVT+ Y +      P  + TV++STQHDE ++ +++
Sbjct:    5 YFFTSESVSEGHPDKVADQISDAILDAILAQDPTARVAAETLCNTGLVVLAGEITTHANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDDGLDQ-GAGDQGLMFGYACDETSELMPMPIHLSHRLVERQSQLRRDGRLNWLRPDAKSQVTLRYVDGK----PDSIDTVVLSTQHDEEISLEKL 202          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK_POLNS (S-adenosylmethionine synthetase OS=Polynucleobacter necessarius (strain STIR1) GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.950e-50
Identity = 103/203 (50.74%), Postives = 141/203 (69.46%), Query Frame = 2
Query:   80 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 688
            + FTSESV+EGHPDK+ DQISD+ILDA L QDP ++VA ET   T LV++ GEITT ANV+Y ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DET E MPL   L+ +L  + +++R++G   WLRPD K+QVT+ Y +      P  + TV++STQHDE ++ +++
Sbjct:    5 YFFTSESVSEGHPDKVADQISDSILDAILAQDPTARVAAETLCNTGLVVLAGEITTNANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDDGLDQ-GAGDQGLMFGYACDETAELMPLPIHLSHRLVERQSQLRRDGRLNWLRPDAKSQVTLRYVDGK----PDSIDTVVLSTQHDEDISLEKL 202          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK_NITOC (S-adenosylmethionine synthetase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.950e-50
Identity = 101/197 (51.27%), Postives = 135/197 (68.53%), Query Frame = 2
Query:   86 FTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVT 676
            FTSESV+EGHPDK+ DQISD ILDA L QD  ++VACET  KT +V+V GEITT+A+++YE+I+R+T   IG+   ++G D   C V+  I +QS DIAQGV   L    E+ GAGDQG MFGYA+DET   MP     A +L  +  E+R+NG  PWLRPD K+QVT+ Y ++    VPV +  +++STQH   ++
Sbjct:    7 FTSESVSEGHPDKVADQISDVILDAILAQDRRARVACETLVKTGMVLVAGEITTQAHIDYEQIIRETITEIGYNHSEIGFDGATCAVVNAIGKQSSDIAQGVDRELE---EDQGAGDQGMMFGYASDETDVLMPAPITYAHRLVQRQAEIRRNGELPWLRPDAKSQVTLLYEDD----VPVAIDAIVLSTQHSPEIS 196          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK_BURP8 (S-adenosylmethionine synthetase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.950e-50
Identity = 104/198 (52.53%), Postives = 135/198 (68.18%), Query Frame = 2
Query:   80 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETV 673
            +LFTSESV+EGHPDK+ DQISDAILDA L QD  S+VA ET   T LV++ GEITT ANV+Y ++ R+T + IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DETPE MPL   L+ +L  +   +R++G  PWLRPD K+QVT+ Y +      P  + TV++STQH   +
Sbjct:    5 YLFTSESVSEGHPDKVADQISDAILDAILAQDKYSRVAAETLCNTGLVVLAGEITTTANVDYIQVARETIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGVDRAHDNNLDQ-GAGDQGLMFGYACDETPELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTIRYVDGK----PHSIDTVVLSTQHSPDI 197          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK_ACIAC (S-adenosylmethionine synthetase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=metK PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.077e-50
Identity = 105/194 (54.12%), Postives = 133/194 (68.56%), Query Frame = 2
Query:   80 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH 661
            FLFTSESV+EGHPDK+ DQISDAILDA   +DP S+VA ET T T LV++ GEITT A+V+Y ++ RDT + IG+ + D G+D   C VLV  ++QS DIAQGV  H S      GAGDQG MFGYA DETPE MP     A +L  +  ++RK+G  P+LRPD K+QVT+ Y +      P  + TV++STQH
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAIFREDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSNDIAQGV-DHASDDHLNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGRLPFLRPDAKSQVTMRYVDGK----PHSIDTVVLSTQH 193          
The following BLAST results are available for this feature:
BLAST of DN621561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_RALEJ4.075e-5052.22S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]
METK_LEPCP4.075e-5054.12S-adenosylmethionine synthetase OS=Leptothrix chol... [more]
METK_DESVV4.075e-5050.74S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_DESVH4.075e-5050.74S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_STRU05.321e-5052.61S-adenosylmethionine synthetase OS=Streptococcus u... [more]
METK_POLSQ6.950e-5050.74S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_POLNS6.950e-5050.74S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_NITOC6.950e-5051.27S-adenosylmethionine synthetase OS=Nitrosococcus o... [more]
METK_BURP86.950e-5052.53S-adenosylmethionine synthetase OS=Burkholderia ph... [more]
METK_ACIAC9.077e-5054.12S-adenosylmethionine synthetase OS=Acidovorax aven... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O03_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621561 ID=DN621561; Name=DN621561; organism=Citrus sinensis; type=EST; length=696bp
ATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTACCCGGTT
CGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTCAGAATCT
GTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCGATGCCAT
TCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCTTGTGAAA
CCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCACAACCAAA
GCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCAACATTGG
ATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAGGTTTTGG
TTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCATGGTCAT
TTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGCATATGTT
TGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGTCATGTTC
TTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAATGGCACT
TGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTGAGTATTA
CAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTTTTGATCT
CTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGCTGA
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