DN621561

Overview
NameDN621561
Unique NameDN621561
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK2_SOLTU (S-adenosylmethionine synthetase 2 OS=Solanum tuberosum GN=METK2 PE=2 SV=1)

HSP 1 Score: 395.586 bits (1015), Expect = 1.331e-109
Identity = 188/207 (90.82%), Postives = 200/207 (96.62%), Query Frame = 2
Query:   71 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIA 691
            METFL TSESVNEGHPDKLCDQ+SDAILDACLEQDP+SKVACETCTKTN+VMVFGEITTKANV+YEKIVRDTCR IGF+S DVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEEIGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKN TCPWLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTND+IA
Sbjct:    1 METFLLTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCREIGFISADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTNDQIA 207          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 395.201 bits (1014), Expect = 1.739e-109
Identity = 186/208 (89.42%), Postives = 202/208 (97.12%), Query Frame = 2
Query:   71 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAA 694
            ME+FLFTSESVNEGHPDKLCDQ+SDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKAN++YEKIVRDTCR+IGFVS DVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPE++GAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTN++IAA
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANIDYEKIVRDTCRSIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEDVGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYNNDNGAMVPIRVHTVLISTQHDETVTNEQIAA 208          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 394.045 bits (1011), Expect = 3.874e-109
Identity = 188/207 (90.82%), Postives = 198/207 (95.65%), Query Frame = 2
Query:   71 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIA 691
            METFLFTSESVNEGHPDKLCDQ+SDAILDACLEQDP+SKVACETCTKTN+VMVFGEITTKA VNYEKIVRDTCR IGF S DVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEEIGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKN TCPWLRPDGKTQVTVEY NE GAMVP+RVHTVLISTQHDETVTN++IA
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKATVNYEKIVRDTCRGIGFTSPDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNEQIA 207          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK2_ORYSJ (S-adenosylmethionine synthetase 2 OS=Oryza sativa subsp. japonica GN=SAM2 PE=2 SV=1)

HSP 1 Score: 393.66 bits (1010), Expect = 5.060e-109
Identity = 189/207 (91.30%), Postives = 197/207 (95.17%), Query Frame = 2
Query:   74 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAA 694
            ETFLFTSESVNEGHPDKLCDQ+SDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR IGFVSDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEY N+ GAMVPVRVHTVLISTQHDETVTNDEIAA
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRGIGFVSDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYLNDAGAMVPVRVHTVLISTQHDETVTNDEIAA 210          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK3_VITVI (S-adenosylmethionine synthetase 3 OS=Vitis vinifera GN=METK3 PE=3 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 6.608e-109
Identity = 188/207 (90.82%), Postives = 199/207 (96.14%), Query Frame = 2
Query:   71 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIA 691
            M+TFLFTSESVNEGHPDKLCDQ+SDAILDACLEQDP+SKVACETC+KTN+VMVFGEITTKA V+YEKIVRDTCR IGFVS DVGLDADNCKVLV IEQQSPDIAQGVHGHLSK+PEEIGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKN TCPWLRPDGKTQVTVEY NE GAMVP+RVHTVLISTQHDETVTND+IA
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCSKTNMVMVFGEITTKAKVDYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLSKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNDQIA 207          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK2_PINCO (S-adenosylmethionine synthetase 2 OS=Pinus contorta GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 8.630e-109
Identity = 187/208 (89.90%), Postives = 199/208 (95.67%), Query Frame = 2
Query:   71 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAA 694
            METFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA+V+YE+IVR TCR IGF+SDDVGLDAD+CKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKNGTCPWLRPDGKTQVT+EY NE GAMVP RVHTVLISTQHDETVTND+IAA
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLTQDPDSKVACETCTKTNMVMVFGEITTKADVDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYRNEGGAMVPERVHTVLISTQHDETVTNDQIAA 208          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 8.630e-109
Identity = 188/207 (90.82%), Postives = 198/207 (95.65%), Query Frame = 2
Query:   71 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIA 691
            ME+FLFTSESVNEGHPDKLCDQ+SDAILDACLEQDP+SKVACETCTKTN+VMVFGEITTKA VNYEKIVRDTCR IGF S DVGLDAD+CKVLV IEQQSPDIAQGVHGHLSK+PEEIGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKN TCPWLRPDGKTQVTVEY NE GAMVPVRVHTVLISTQHDETVTN++IA
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFTSPDVGLDADHCKVLVNIEQQSPDIAQGVHGHLSKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNNTCPWLRPDGKTQVTVEYRNEGGAMVPVRVHTVLISTQHDETVTNEQIA 207          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 1.472e-108
Identity = 187/207 (90.34%), Postives = 198/207 (95.65%), Query Frame = 2
Query:   71 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIA 691
            METFLFTSESVNEGHPDKLCDQ+SDAILDACLEQDP+SKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR IGF S DVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEEIGAGDQGHMFGYATDETPE MPL+HV AT+LGAKLTEVRKN TCPWLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTND+IA
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRGIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVWATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTNDQIA 207          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK1_ORYSJ (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. japonica GN=SAM1 PE=2 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 1.472e-108
Identity = 187/208 (89.90%), Postives = 200/208 (96.15%), Query Frame = 2
Query:   71 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAA 694
            ++TFLFTSESVNEGHPDKLCDQ+SDA+LDACL +DPDSKVACETCTKTN+VMVFGEITTKANV+YEKIVR+TCRNIGFVS DVGLDAD+CKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEY NE+GA VPVRVHTVLISTQHDETVTNDEIAA
Sbjct:    4 LDTFLFTSESVNEGHPDKLCDQVSDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRETCRNIGFVSADVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTNDEIAA 211          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK1_ORYSI (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. indica GN=SAM1 PE=2 SV=2)

HSP 1 Score: 392.119 bits (1006), Expect = 1.472e-108
Identity = 187/208 (89.90%), Postives = 200/208 (96.15%), Query Frame = 2
Query:   71 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAA 694
            ++TFLFTSESVNEGHPDKLCDQ+SDA+LDACL +DPDSKVACETCTKTN+VMVFGEITTKANV+YEKIVR+TCRNIGFVS DVGLDAD+CKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVTVEY NE+GA VPVRVHTVLISTQHDETVTNDEIAA
Sbjct:    4 LDTFLFTSESVNEGHPDKLCDQVSDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRETCRNIGFVSADVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTNDEIAA 211          
The following BLAST results are available for this feature:
BLAST of DN621561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_SOLTU1.331e-10990.82S-adenosylmethionine synthetase 2 OS=Solanum tuber... [more]
METK2_SUASA1.739e-10989.42S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK3_CATRO3.874e-10990.82S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK2_ORYSJ5.060e-10991.30S-adenosylmethionine synthetase 2 OS=Oryza sativa ... [more]
METK3_VITVI6.608e-10990.82S-adenosylmethionine synthetase 3 OS=Vitis vinifer... [more]
METK2_PINCO8.630e-10989.90S-adenosylmethionine synthetase 2 OS=Pinus contort... [more]
METK2_ACTCH8.630e-10990.82S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]
METK1_TOBAC1.472e-10890.34S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_ORYSJ1.472e-10889.90S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK1_ORYSI1.472e-10889.90S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06O03_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621561 ID=DN621561; Name=DN621561; organism=Citrus sinensis; type=EST; length=696bp
ATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTACCCGGTT
CGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTCAGAATCT
GTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCGATGCCAT
TCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCTTGTGAAA
CCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCACAACCAAA
GCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCAACATTGG
ATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAGGTTTTGG
TTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCATGGTCAT
TTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGCATATGTT
TGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGTCATGTTC
TTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAATGGCACT
TGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTGAGTATTA
CAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTTTTGATCT
CTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGCTGA
back to top