DN621561

Overview
NameDN621561
Unique NameDN621561
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK_NEUCR (S-adenosylmethionine synthetase OS=Neurospora crassa GN=eth-1 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.001e-69
Identity = 125/207 (60.39%), Postives = 160/207 (77.29%), Query Frame = 2
Query:   68 NMETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 688
            N  TFLFTSESV EGHPDK+ DQ+SDAILDACL +DP SKVACET TKT ++MVFGEITTKA ++Y+K+VR+  ++IG+     G D   C +LV IE+QSPDIAQG+  HL  R E +GAGDQG MFGYATDETPE  PL+ + A +L A ++  R++G+ PWLRPD KTQVT+EY ++NGA+VP+RV TV++S QH   +T +E+
Sbjct:   13 NEGTFLFTSESVGEGHPDKIADQVSDAILDACLAEDPLSKVACETATKTGMIMVFGEITTKAKLDYQKVVRNAIKDIGYDDSSKGFDYKTCNLLVAIEEQSPDIAQGL--HLDDRLENLGAGDQGIMFGYATDETPELFPLTLLFAHKLNAAMSAARRDGSLPWLRPDTKTQVTIEYKHDNGAVVPLRVDTVVVSAQHAPEITTEEL 217          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK1_YEAST (S-adenosylmethionine synthetase 1 OS=Saccharomyces cerevisiae GN=SAM1 PE=1 SV=2)

HSP 1 Score: 261.151 bits (666), Expect = 3.919e-69
Identity = 127/206 (61.65%), Postives = 158/206 (76.70%), Query Frame = 2
Query:   77 TFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAA 694
            TFLFTSESV EGHPDK+CDQ+SDAILDACL +DP SKVACET  KT ++MVFGEITTKA ++Y+KIVRDT + IG+     G D   C VLV IEQQSPDIAQGVH    K  E+IGAGDQG MFGYATDETPE +PL+ +LA +L   + + R++G+  WLRPD KTQVTVEY +++G  VP R+ TV++S QH + +T +++ A
Sbjct:    4 TFLFTSESVGEGHPDKICDQVSDAILDACLAEDPHSKVACETAAKTGMIMVFGEITTKAQLDYQKIVRDTIKKIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGVHE--EKDLEDIGAGDQGIMFGYATDETPEGLPLTILLAHKLNMAMADARRDGSLAWLRPDTKTQVTVEYKDDHGRWVPQRIDTVVVSAQHADEITTEDLRA 207          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK1_HUMAN (S-adenosylmethionine synthetase isoform type-1 OS=Homo sapiens GN=MAT1A PE=1 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 2.540e-68
Identity = 121/203 (59.61%), Postives = 162/203 (79.80%), Query Frame = 2
Query:   80 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 688
            F+FTSESV EGHPDK+CDQISDA+LDA L+QDP++KVACET  KT +V++ GEIT+ A V+Y+++VRDT ++IG+     G D   C VLV +EQQSPDIAQ V  HL +  E++GAGDQG MFGYATDET E MPL+ +LA +L A++ ++R++G  PWLRPD KTQVTV+Y  +NGA++PVR+HT++IS QH+E +T +E+
Sbjct:   18 FMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDITLEEM 218          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK1_RAT (S-adenosylmethionine synthetase isoform type-1 OS=Rattus norvegicus GN=Mat1a PE=1 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 1.647e-67
Identity = 120/199 (60.30%), Postives = 158/199 (79.40%), Query Frame = 2
Query:   80 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVT 676
            F+FTSESV EGHPDK+CDQISDA+LDA L+QDP++KVACET  KT +V++ GEIT+ A ++Y+++VRDT ++IG+     G D   C VLV +EQQSPDIAQ V  HL +  E++GAGDQG MFGYATDET E MPL+ VLA +L  ++ ++R++G  PWLRPD KTQVTV+Y  +NGA++PVRVHT++IS QH+E +T
Sbjct:   19 FMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMIDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNTRMADLRRSGVLPWLRPDSKTQVTVQYVQDNGAVIPVRVHTIVISVQHNEDIT 215          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK1_MOUSE (S-adenosylmethionine synthetase isoform type-1 OS=Mus musculus GN=Mat1a PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.150e-67
Identity = 120/199 (60.30%), Postives = 158/199 (79.40%), Query Frame = 2
Query:   80 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVT 676
            F+FTSESV EGHPDK+CDQISDA+LDA L+QDP++KVACET  KT +V++ GEIT+ A V+Y+++VRDT ++IG+     G D   C VLV +EQQSPDIAQ V  HL +  E++GAGDQG MFGYATDET E MPL+ VLA +L  ++ ++R++G  PWLRPD KTQVTV+Y  +NGA++PVR+HT++IS QH+E +T
Sbjct:   19 FMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSVAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNTRIADLRRSGVLPWLRPDSKTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDIT 215          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK1_CAEEL (Probable S-adenosylmethionine synthetase 1 OS=Caenorhabditis elegans GN=sams-1 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.668e-67
Identity = 121/203 (59.61%), Postives = 161/203 (79.31%), Query Frame = 2
Query:   80 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 688
            FLFTSESV+EGHPDK+CDQISDA+LDA L+QDP++KVACET TKT +VM+ GEIT+KA V+Y+ +VR     IGF    +G D   C VLV +EQQSP+IA GV  H++K  E++GAGDQG MFGYATDET E MPL+ +L+ ++ A+L ++R+NGT PW+RPD K+QVT+EY + +GA +P+RVHTV++STQH   VT +++
Sbjct:    5 FLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKAVVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGV--HVNKDGEDVGAGDQGIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYESRHGATIPLRVHTVVVSTQHSPDVTLEKL 205          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK1_BOVIN (S-adenosylmethionine synthetase isoform type-1 OS=Bos taurus GN=MAT1A PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 8.172e-67
Identity = 120/203 (59.11%), Postives = 162/203 (79.80%), Query Frame = 2
Query:   80 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 688
            F+FTSESV EGHPDK+CDQISDA+LDA L+QDP++KVACET  KT +V++ GEIT+ A V+Y+++VR+T ++IG+     G D   C VLV +EQQSPDIAQ V  HL +  E++GAGDQG MFGYATDET E MPL+ +LA +L A++ E+R++G  PWL+PD KTQVTV+Y  +NGA++P+RVHTV+IS QH+E +T +++
Sbjct:   19 FMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRETIQHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQGLMFGYATDETEECMPLTIMLAHRLNARMAELRRSGQLPWLQPDSKTQVTVQYTQDNGAVIPMRVHTVVISVQHNEDITLEDM 219          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK_LEIIN (S-adenosylmethionine synthetase OS=Leishmania infantum GN=METK PE=2 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 2.013e-65
Identity = 128/212 (60.38%), Postives = 158/212 (74.53%), Query Frame = 2
Query:   68 NMETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE----NGAMVPVRVHTVLISTQHDETVTNDEIA 691
            ++ + LF+SE V EGHPDKLCDQ+SDA+LDACL  DP SKVACE+C KT +VMVFGEITTKA ++Y+KIVR+T ++IGF S D GLD ++C VLV IEQQSPDI QG+    S   E++GAGDQG MFGYATDET   MPL++ LA  L  K +E+R++G+  W RPD KTQVTVEY  +       + P RV  VLIS QHDE VTND+I+
Sbjct:    2 SVHSILFSSEHVTEGHPDKLCDQVSDAVLDACLAGDPFSKVACESCAKTGMVMVFGEITTKAVLDYQKIVRNTIKDIGFDSADKGLDYESCNVLVAIEQQSPDICQGLGNFDS---EDLGAGDQGMMFGYATDETETLMPLTYELARGLAKKYSELRRSGSLEWARPDAKTQVTVEYDYDTREGKQVLTPKRVAVVLISAQHDEHVTNDKIS 210          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK4_CAEEL (Probable S-adenosylmethionine synthetase 4 OS=Caenorhabditis elegans GN=sams-4 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 7.649e-65
Identity = 120/203 (59.11%), Postives = 156/203 (76.85%), Query Frame = 2
Query:   80 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 688
            FLFTSESV+EGHPDK+CDQISDA+LDA L QDP +KVACET TKT ++M+ GEIT+KA V+Y+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H+ K  +++GAGDQG MFGYATDET E MPL+ +L+ +L  KL E+R++G   W+RPD KTQVT+EY +E GA VP+RVHTV+ISTQH   ++ D++
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVISTQHSPDISLDDL 206          
BLAST of DN621561 vs. ExPASy Swiss-Prot
Match: METK3_CAEEL (Probable S-adenosylmethionine synthetase 3 OS=Caenorhabditis elegans GN=sams-3 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 7.649e-65
Identity = 120/203 (59.11%), Postives = 156/203 (76.85%), Query Frame = 2
Query:   80 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEI 688
            FLFTSESV+EGHPDK+CDQISDA+LDA L QDP +KVACET TKT ++M+ GEIT+KA V+Y+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H+ K  +++GAGDQG MFGYATDET E MPL+ +L+ +L  KL E+R++G   W+RPD KTQVT+EY +E GA VP+RVHTV+ISTQH   ++ D++
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVISTQHSPDISLDDL 206          
The following BLAST results are available for this feature:
BLAST of DN621561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_NEUCR3.001e-6960.39S-adenosylmethionine synthetase OS=Neurospora cras... [more]
METK1_YEAST3.919e-6961.65S-adenosylmethionine synthetase 1 OS=Saccharomyces... [more]
METK1_HUMAN2.540e-6859.61S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_RAT1.647e-6760.30S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_MOUSE2.150e-6760.30S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_CAEEL3.668e-6759.61Probable S-adenosylmethionine synthetase 1 OS=Caen... [more]
METK1_BOVIN8.172e-6759.11S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_LEIIN2.013e-6560.38S-adenosylmethionine synthetase OS=Leishmania infa... [more]
METK4_CAEEL7.649e-6559.11Probable S-adenosylmethionine synthetase 4 OS=Caen... [more]
METK3_CAEEL7.649e-6559.11Probable S-adenosylmethionine synthetase 3 OS=Caen... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O03_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621561 ID=DN621561; Name=DN621561; organism=Citrus sinensis; type=EST; length=696bp
ATTTCTTCTTTCTCTGGTCAGCTTTCTCTCAATTCTAGATCTACCCGGTT
CGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTTCACTTCAGAATCT
GTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGATCTCCGATGCCAT
TCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAGGTGGCTTGTGAAA
CCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCACAACCAAA
GCTAATGTTAATTACGAGAAAATTGTTCGTGACACTTGCCGCAACATTGG
ATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAACTGTAAGGTTTTGG
TTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGGCGTTCATGGTCAT
TTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATCAGGGGCATATGTT
TGGTTATGCTACCGATGAGACTCCTGAATTTATGCCTCTGAGTCATGTTC
TTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCGAAAGAATGGCACT
TGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTACTGTTGAGTATTA
CAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCACACAGTTTTGATCT
CTACTCAGCATGACGAAACTGTGACTAATGATGAGATCGCTGCTGA
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