DN621560

Overview
NameDN621560
Unique NameDN621560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.039e-56
Identity = 107/114 (93.86%), Postives = 112/114 (98.25%), Query Frame = -3
Query:  372 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEK 713
            KVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDKEIL+IVKENFDFRPGMIAINLDLKRGGN RFLKTAAYGHFGR+DPDFTWEVVKPLK+EK
Sbjct:  277 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 390          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.357e-56
Identity = 106/117 (90.60%), Postives = 113/117 (96.58%), Query Frame = -3
Query:  363 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQE 713
            KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPD+EIL+IVKENFDFRPGM++INLDLKRGGN RFLKTAAYGHFGR+D DFTWEVVKPLK+E PQ+
Sbjct:  277 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENFDFRPGMMSINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKWENPQD 393          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.357e-56
Identity = 106/116 (91.38%), Postives = 113/116 (97.41%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPD+EIL+IVKENFDFRPGMI++NLDLKRGGN RFLKTAAYGHFGREDPDFTWEVVKPLK++K Q
Sbjct:  277 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILKIVKENFDFRPGMISVNLDLKRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWDKVQ 392          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.357e-56
Identity = 107/114 (93.86%), Postives = 112/114 (98.25%), Query Frame = -3
Query:  372 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEK 713
            KVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKENFDFRPGMIAINLDLKRGG+ RFLKTAAYGHFGR+DPDFTWEVVKPLK+EK
Sbjct:  277 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGSGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 390          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK2_SOLLC (S-adenosylmethionine synthetase 2 OS=Solanum lycopersicum GN=SAM2 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.773e-56
Identity = 106/116 (91.38%), Postives = 112/116 (96.55%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL IVKENFDFRPGMI+INLDL RGGN RFLKTAAYGHFGR+DPDFTWEVVKPLK++KP+
Sbjct:  277 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILNIVKENFDFRPGMISINLDLLRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPE 392          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_PETCR (S-adenosylmethionine synthetase 1 (Fragment) OS=Petroselinum crispum GN=SMS-1 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.773e-56
Identity = 107/114 (93.86%), Postives = 111/114 (97.37%), Query Frame = -3
Query:  372 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEK 713
            KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPD+EIL+IVKE FDFRPGMI+INLDLKRGGN RFLKTAAYGHFGREDPDFTWEVVKPLK+EK
Sbjct:  120 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWEK 233          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.315e-56
Identity = 108/116 (93.10%), Postives = 113/116 (97.41%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKENFDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPDFTWEVVKPLK+EKPQ
Sbjct:  277 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGGN-RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 391          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_ORYSJ (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. japonica GN=SAM1 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.949e-56
Identity = 104/115 (90.43%), Postives = 111/115 (96.52%), Query Frame = -3
Query:  369 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKP 713
            KVDRSGAY+ RQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTY TG+IPDKEIL+IVKENFDFRPGMI INLDLK+GGN R+LKTAAYGHFGR+DPDFTWEVVKPLK+EKP
Sbjct:  280 KVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGRIPDKEILKIVKENFDFRPGMIIINLDLKKGGNGRYLKTAAYGHFGRDDPDFTWEVVKPLKWEKP 394          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_ORYSI (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. indica GN=SAM1 PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 3.949e-56
Identity = 104/115 (90.43%), Postives = 111/115 (96.52%), Query Frame = -3
Query:  369 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKP 713
            KVDRSGAY+ RQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTY TG+IPDKEIL+IVKENFDFRPGMI INLDLK+GGN R+LKTAAYGHFGR+DPDFTWEVVKPLK+EKP
Sbjct:  280 KVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGRIPDKEILKIVKENFDFRPGMIIINLDLKKGGNGRYLKTAAYGHFGRDDPDFTWEVVKPLKWEKP 394          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.949e-56
Identity = 104/116 (89.66%), Postives = 111/116 (95.69%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYIVRQAAKSIVA+GLARRC+VQVSYAIGVPEPLSVFVD+Y TG+IPDKEIL IVKENFDFRPGMI INLDLKRGGN RFLKTA YGHFGR+DPDFTWE+VKPLK+EKPQ
Sbjct:  277 KVDRSGAYIVRQAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGQIPDKEILNIVKENFDFRPGMITINLDLKRGGNGRFLKTAGYGHFGRDDPDFTWEIVKPLKWEKPQ 392          
The following BLAST results are available for this feature:
BLAST of DN621560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK5_VITVI1.039e-5693.86S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]
METK_SOLBR1.357e-5690.60S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK_LITCN1.357e-5691.38S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK1_CATRO1.357e-5693.86S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]
METK2_SOLLC1.773e-5691.38S-adenosylmethionine synthetase 2 OS=Solanum lycop... [more]
METK1_PETCR1.773e-5693.86S-adenosylmethionine synthetase 1 (Fragment) OS=Pe... [more]
METK1_POPTR2.315e-5693.10S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK1_ORYSJ3.949e-5690.43S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK1_ORYSI3.949e-5690.43S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK1_ELAUM3.949e-5689.66S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O03_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621560 ID=DN621560; Name=DN621560; organism=Citrus sinensis; type=EST; length=715bp
GGCCCCCCCTTTTTTTTTCAGAGATAAGAAGTAGATGAATACTCATAATT
TGATTATGAAGAAAAAAATGCATTAATAGTACATTAACAAATAACAATGT
GTCTCCACAAACGAGCTCTTCTTCCATCTCTATTTCTCTTCCTAGCATAT
CTCATACAGGCAACTTCTCTGTAATTCTTTCATCGACTATGACTCAATTA
GACCACATATATCTTTCTATTATGGCAAAGATAATACAAATTTATTTATA
AAAAAAAAAGGCCAAGACCAAGAGAGAAAAAAGACAGAATCTGACAGGCA
GACGAAAGAACAAGTAAATTATTGAGTTCAAACAAAGAATGAAACTGCAT
ACTTAAATTCTACTCTTGGGGTTTCTCATACTTGAGGGGCTTCACCACCT
CCCATGTGAAGTCAGGATCCTCCCTTCCAAAATGCCCATATGCAGCAGTC
TTCAAAAACCTGCTATTTCCTCCCCTCTTGAGATCCAAGTTAATGGCAAT
CATTCCAGGCCTGAAATCAAAGTTCTCCTTCACAATCCTCAGGATCTCCT
TGTCCGGAATCTTTCCAGTTCGATAAGTGTCAACAAACACTGAAAGGGGC
TCTGGGACACCAATAGCATAAGAAACCTGCACAATGCAGCGGCGAGCAAG
GCCACTGGCAACGATGCTCTTTGCTGCCTGCCTCACAATGTAAGCACCAC
TTCTATCAACCTTGG
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