DN621560

Overview
NameDN621560
Unique NameDN621560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_ARATH (S-adenosylmethionine synthetase 1 OS=Arabidopsis thaliana GN=SAM1 PE=1 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.270e-54
Identity = 101/116 (87.07%), Postives = 111/116 (95.69%), Query Frame = -3 
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVDTY TG IPDKEIL+IVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPDFTWEVVKPLK++KPQ
Sbjct:  277 KVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYETGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQ 392
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.167e-54
Identity = 103/109 (94.50%), Postives = 107/109 (98.17%), Query Frame = -3 
Query:  387 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKP 713
            KVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSV+VDTY TGKIPDKEIL+IVKENFDFRPGMI INLDLKRGGNSRFLKTAAYGHFGR+DPDFTWEVVKP
Sbjct:  277 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVYVDTYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKP 385
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.167e-54
Identity = 101/116 (87.07%), Postives = 111/116 (95.69%), Query Frame = -3 
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVDTY TG IPDKEIL+IVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPDFTWEVVKPLK++KPQ
Sbjct:  277 KVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQ 392
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.167e-54
Identity = 101/116 (87.07%), Postives = 111/116 (95.69%), Query Frame = -3 
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVDTY TG IPDKEIL+IVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPDFTWEVVKPLK++KPQ
Sbjct:  277 KVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQ 392
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK3_BRAJU (S-adenosylmethionine synthetase 3 OS=Brassica juncea GN=MSAMS3 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.167e-54
Identity = 101/116 (87.07%), Postives = 111/116 (95.69%), Query Frame = -3 
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVDTY TG IPDKEIL+IVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPDFTWEVVKPLK++KPQ
Sbjct:  277 KVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQ 392
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.167e-54
Identity = 103/114 (90.35%), Postives = 110/114 (96.49%), Query Frame = -3 
Query:  372 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEK 713
            KVDRSGAYIVRQAAKSIVA+GLARR IVQVSYAIGVPEPLSVFVDTY TGKIPDK+IL+IVKENFDFRPGMI+INLDLKRGGN+RF KTAAYGHFGR+DPDFTWE VKPLK+EK
Sbjct:  277 KVDRSGAYIVRQAAKSIVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKDILKIVKENFDFRPGMISINLDLKRGGNARFQKTAAYGHFGRDDPDFTWETVKPLKWEK 390
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_WHEAT (S-adenosylmethionine synthetase OS=Triticum aestivum GN=SAMS PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.830e-54
Identity = 103/115 (89.57%), Postives = 107/115 (93.04%), Query Frame = -3 
Query:  369 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKP 713
            KVDRSGAY+ RQAAKSIVASG+ARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL IVKENFDFRPGMI INLDLKRGG  R+LKTAAYGHFGRE  DFTWEVVKPLK+EKP
Sbjct:  280 KVDRSGAYVARQAAKSIVASGIARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILEIVKENFDFRPGMIIINLDLKRGGKGRYLKTAAYGHFGREGADFTWEVVKPLKWEKP 394
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.830e-54
Identity = 105/116 (90.52%), Postives = 109/116 (93.97%), Query Frame = -3 
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDKEIL IVKE+FDFRPGMI+INLDLKRGGN RFLKTAAYGHFGR+D DFTWEVVKPLK  K Q
Sbjct:  277 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKSNKVQ 392
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK4_HORVU (S-adenosylmethionine synthetase 4 OS=Hordeum vulgare GN=SAM4 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.697e-54
Identity = 103/115 (89.57%), Postives = 108/115 (93.91%), Query Frame = -3 
Query:  369 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKP 713
            KVDRSGAYI RQAAKSIVASG+ARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL IVKENFDFRPGMI INLDLKRGG+ R+LKTAAYGHFGR+  DFTWEVVKPLK+EKP
Sbjct:  280 KVDRSGAYIARQAAKSIVASGIARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILEIVKENFDFRPGMIIINLDLKRGGSGRYLKTAAYGHFGRDGADFTWEVVKPLKWEKP 394
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK2_BETVU (S-adenosylmethionine synthetase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.828e-54
Identity = 103/114 (90.35%), Postives = 109/114 (95.61%), Query Frame = -3 
Query:  372 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEK 713
            KVDRSGAYIVRQAAKSIVA+GLARR IVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKE FDFRPGM++INLDLKRGGN RF KTAAYGHFGR+DPDFTWEVVKPLK+EK
Sbjct:  277 KVDRSGAYIVRQAAKSIVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMMSINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWEVVKPLKWEK 390
The following BLAST results are available for this feature:
BLAST of DN621560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_ARATH1.270e-5487.07S-adenosylmethionine synthetase 1 OS=Arabidopsis t... [more]
METK_CARPA2.167e-5494.50S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK_BRARP2.167e-5487.07S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_BRAJU2.167e-5487.07S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK3_BRAJU2.167e-5487.07S-adenosylmethionine synthetase 3 OS=Brassica junc... [more]
METK2_SUASA2.167e-5490.35S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK_WHEAT2.830e-5489.57S-adenosylmethionine synthetase OS=Triticum aestiv... [more]
METK2_BRAJU2.830e-5490.52S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK4_HORVU3.697e-5489.57S-adenosylmethionine synthetase 4 OS=Hordeum vulga... [more]
METK2_BETVU4.828e-5490.35S-adenosylmethionine synthetase 2 OS=Beta vulgaris... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O03_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621560 ID=DN621560; Name=DN621560; organism=Citrus sinensis; type=EST; length=715bp
GGCCCCCCCTTTTTTTTTCAGAGATAAGAAGTAGATGAATACTCATAATT
TGATTATGAAGAAAAAAATGCATTAATAGTACATTAACAAATAACAATGT
GTCTCCACAAACGAGCTCTTCTTCCATCTCTATTTCTCTTCCTAGCATAT
CTCATACAGGCAACTTCTCTGTAATTCTTTCATCGACTATGACTCAATTA
GACCACATATATCTTTCTATTATGGCAAAGATAATACAAATTTATTTATA
AAAAAAAAAGGCCAAGACCAAGAGAGAAAAAAGACAGAATCTGACAGGCA
GACGAAAGAACAAGTAAATTATTGAGTTCAAACAAAGAATGAAACTGCAT
ACTTAAATTCTACTCTTGGGGTTTCTCATACTTGAGGGGCTTCACCACCT
CCCATGTGAAGTCAGGATCCTCCCTTCCAAAATGCCCATATGCAGCAGTC
TTCAAAAACCTGCTATTTCCTCCCCTCTTGAGATCCAAGTTAATGGCAAT
CATTCCAGGCCTGAAATCAAAGTTCTCCTTCACAATCCTCAGGATCTCCT
TGTCCGGAATCTTTCCAGTTCGATAAGTGTCAACAAACACTGAAAGGGGC
TCTGGGACACCAATAGCATAAGAAACCTGCACAATGCAGCGGCGAGCAAG
GCCACTGGCAACGATGCTCTTTGCTGCCTGCCTCACAATGTAAGCACCAC
TTCTATCAACCTTGG
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