DN621560

Overview
NameDN621560
Unique NameDN621560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK2_PICSI (S-adenosylmethionine synthetase 2 OS=Picea sitchensis GN=METK2 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.235e-54
Identity = 100/116 (86.21%), Postives = 108/116 (93.10%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYIVRQAAKSIVA+GLARRC+VQVSYAIGVPEPLSVFVD+Y TG IPDKEIL ++KENFDFRPGMI INLDLKRGGN RF KTAAYGHFGR+DPDFTWE VKPLK++K Q
Sbjct:  277 KVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVPEPLSVFVDSYGTGSIPDKEILELIKENFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWDKAQ 392          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.235e-54
Identity = 103/116 (88.79%), Postives = 111/116 (95.69%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYI RQAAKSIVASGLARRCIVQ+SYAIGVPEPLSVFVDTY TGKIPDK+IL+IVKE FDFRPGMIAINLDL +GG SR+LKTAAYGHFGR+DPDFTWEVVKPLK++KPQ
Sbjct:  281 KVDRSGAYIARQAAKSIVASGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKDILKIVKETFDFRPGMIAINLDLLKGG-SRYLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQ 395          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK2_ARATH (S-adenosylmethionine synthetase 2 OS=Arabidopsis thaliana GN=SAM2 PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.405e-53
Identity = 100/116 (86.21%), Postives = 109/116 (93.97%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVDTY TG IPDKEIL+IVKE FDFRPGM+ INLDLKRGGN RF KTAAYGHFGR+DPDFTWEVVKPLK++KPQ
Sbjct:  277 KVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKETFDFRPGMMTINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWEVVKPLKWDKPQ 392          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_BRAJU (S-adenosylmethionine synthetase 1 OS=Brassica juncea GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.405e-53
Identity = 99/116 (85.34%), Postives = 110/116 (94.83%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYIVRQ+AKS+VA+G+ARR +VQVSYAIGVPEP SVFVDTY TG IPDKEIL+IVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPDFTWEVVKPLK++KPQ
Sbjct:  277 KVDRSGAYIVRQSAKSVVANGMARRALVQVSYAIGVPEPFSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQ 392          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.396e-53
Identity = 101/116 (87.07%), Postives = 108/116 (93.10%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLS+FVDTY TG IPDKEIL I+KE+FDFRPGMI+INLDLKRGGN R  KTAAYGHFGR+DPDFTWE VKPLK+EK Q
Sbjct:  277 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSLFVDTYGTGSIPDKEILEIIKEHFDFRPGMISINLDLKRGGNGRSQKTAAYGHFGRDDPDFTWETVKPLKWEKAQ 392          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_MEDFA (S-adenosylmethionine synthetase OS=Medicago falcata GN=SAMS PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.129e-53
Identity = 102/111 (91.89%), Postives = 107/111 (96.40%), Query Frame = -3
Query:  381 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 713
            KVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDKEIL IVKE FDFRPGMI+INLDLKRGGN+RFLKTAAYGHFGR+D DFTWEVVKPLK
Sbjct:  279 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILNIVKETFDFRPGMISINLDLKRGGNNRFLKTAAYGHFGRDDADFTWEVVKPLK 389          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_TRIMO (S-adenosylmethionine synthetase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.129e-53
Identity = 101/114 (88.60%), Postives = 110/114 (96.49%), Query Frame = -3
Query:  372 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEK 713
            KVDRSGAYI RQAAKSI+ASGLARRCIVQ+SYAIGVPEPLSVFVD+Y TGKIPDKEIL+IVKENFDFRPGMI+INLDLK+GGN RF+KTAAYGHFGRED DFTWEVVKPLK++K
Sbjct:  279 KVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKKGGN-RFIKTAAYGHFGREDADFTWEVVKPLKFDK 391          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.087e-53
Identity = 104/116 (89.66%), Postives = 108/116 (93.10%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYIVRQAAKSIVASGLARR IVQVSYAIGVPEPLSVFVD+Y TGKIPDKEIL IVKE+FDFRPGMI+INLDLKRGGN RFLKTAAYGHFGR+D DFTWEVVKPLK  K Q
Sbjct:  277 KVDRSGAYIVRQAAKSIVASGLARRVIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKSNKVQ 392          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.971e-53
Identity = 102/116 (87.93%), Postives = 110/116 (94.83%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYI RQAAKSIVA+GLARRCIVQ+SYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKE+FDFRPGMIAINLDL +GG SR+LKTAAYGHFGR+D DFTWE VKPLK+EKPQ
Sbjct:  281 KVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESFDFRPGMIAINLDLLKGG-SRYLKTAAYGHFGRDDADFTWETVKPLKWEKPQ 395          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.105e-53
Identity = 102/116 (87.93%), Postives = 109/116 (93.97%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYI RQAAKSIVA+GLARRCIVQ+SYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKE FDFRPGMIAINLDL +GG SR+LKTAAYGHFGR+D DFTWE VKPLK+EKPQ
Sbjct:  281 KVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGG-SRYLKTAAYGHFGRDDADFTWETVKPLKWEKPQ 395          
The following BLAST results are available for this feature:
BLAST of DN621560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_PICSI8.235e-5486.21S-adenosylmethionine synthetase 2 OS=Picea sitchen... [more]
METK1_BETVU8.235e-5488.79S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]
METK2_ARATH1.405e-5386.21S-adenosylmethionine synthetase 2 OS=Arabidopsis t... [more]
METK1_BRAJU1.405e-5385.34S-adenosylmethionine synthetase 1 OS=Brassica junc... [more]
METK_PINBN2.396e-5387.07S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK_MEDFA3.129e-5391.89S-adenosylmethionine synthetase OS=Medicago falcat... [more]
METK1_TRIMO3.129e-5388.60S-adenosylmethionine synthetase 1 OS=Triticum mono... [more]
METK4_ARATH4.087e-5389.66S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK3_ATRNU6.971e-5387.93S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK4_ATRNU9.105e-5387.93S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O03_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621560 ID=DN621560; Name=DN621560; organism=Citrus sinensis; type=EST; length=715bp
GGCCCCCCCTTTTTTTTTCAGAGATAAGAAGTAGATGAATACTCATAATT
TGATTATGAAGAAAAAAATGCATTAATAGTACATTAACAAATAACAATGT
GTCTCCACAAACGAGCTCTTCTTCCATCTCTATTTCTCTTCCTAGCATAT
CTCATACAGGCAACTTCTCTGTAATTCTTTCATCGACTATGACTCAATTA
GACCACATATATCTTTCTATTATGGCAAAGATAATACAAATTTATTTATA
AAAAAAAAAGGCCAAGACCAAGAGAGAAAAAAGACAGAATCTGACAGGCA
GACGAAAGAACAAGTAAATTATTGAGTTCAAACAAAGAATGAAACTGCAT
ACTTAAATTCTACTCTTGGGGTTTCTCATACTTGAGGGGCTTCACCACCT
CCCATGTGAAGTCAGGATCCTCCCTTCCAAAATGCCCATATGCAGCAGTC
TTCAAAAACCTGCTATTTCCTCCCCTCTTGAGATCCAAGTTAATGGCAAT
CATTCCAGGCCTGAAATCAAAGTTCTCCTTCACAATCCTCAGGATCTCCT
TGTCCGGAATCTTTCCAGTTCGATAAGTGTCAACAAACACTGAAAGGGGC
TCTGGGACACCAATAGCATAAGAAACCTGCACAATGCAGCGGCGAGCAAG
GCCACTGGCAACGATGCTCTTTGCTGCCTGCCTCACAATGTAAGCACCAC
TTCTATCAACCTTGG
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