DN621560

Overview
NameDN621560
Unique NameDN621560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_PSEPG (S-adenosylmethionine synthetase OS=Pseudomonas putida (strain GB-1) GN=metK PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 57/115 (49.57%), Postives = 74/115 (64.35%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD----------FTWE 713
            KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV +P S+ ++T+ TGK+ D +I+++V+E FD RP  I   LDL    +  + +TAAYGHFGR              FTWE
Sbjct:  271 KVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDDKIIQLVRECFDLRPYAITTMLDLL---HPMYQETAAYGHFGRTPQQKTVGDDTFTTFTWE 382          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_PSEP1 (S-adenosylmethionine synthetase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=metK PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 57/115 (49.57%), Postives = 74/115 (64.35%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD----------FTWE 713
            KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV +P S+ ++T+ TGK+ D +I+++V+E FD RP  I   LDL    +  + +TAAYGHFGR              FTWE
Sbjct:  271 KVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDDKIIQLVRECFDLRPYAITTMLDLL---HPMYQETAAYGHFGRTPQQKTVGDDTFTTFTWE 382          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_PROMH (S-adenosylmethionine synthetase OS=Proteus mirabilis (strain HI4320) GN=metK PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 57/105 (54.29%), Postives = 72/105 (68.57%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T KIP  +++ +V+E FD RP  +   LDL    +  + KTAAYGHFGR   +F WE
Sbjct:  270 KVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKIPTSQLILLVREFFDLRPYGLIQMLDLL---HPIYQKTAAYGHFGR--AEFPWE 369          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_PROM0 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9301) GN=metK PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 54/112 (48.21%), Postives = 72/112 (64.29%), Query Frame = -3
Query:  390 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDL----KRGGNSRFLKTAAYGHFGREDPDFTWEVVK 713
            KVDRS AY  R  AKSIV + LA++  VQ+SYAIGV +P+S+ V+T+ TG I    +  ++KE+FD RP  I    +L    K+ G   F KTA+YGHFGR D +  WE V+
Sbjct:  288 KVDRSAAYAARYVAKSIVKAKLAKKAEVQLSYAIGVAKPISILVETFDTGVISQNNLTELIKEHFDLRPAAIIKEFNLRNLPKKMGGKFFRKTASYGHFGRRDLELPWENVE 399          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_LACRJ (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain JCM 1112) GN=metK PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS +Y  R  AK+IVA+G A++  +QV+YAIGV EP+S+ ++TY TG   ++E++  V++ FD RP  I   LDLKR     + +TAAYGHFGR D D  WE
Sbjct:  281 KVDRSASYAARYIAKNIVAAGYAKKAEIQVAYAIGVAEPVSIMINTYGTGTRSEEELIAAVRKAFDLRPAGIIEMLDLKR---PIYKQTAAYGHFGRTDVDLPWE 382          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_LACRD (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain DSM 20016) GN=metK PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS +Y  R  AK+IVA+G A++  +QV+YAIGV EP+S+ ++TY TG   ++E++  V++ FD RP  I   LDLKR     + +TAAYGHFGR D D  WE
Sbjct:  281 KVDRSASYAARYIAKNIVAAGYAKKAEIQVAYAIGVAEPVSIMINTYGTGTRSEEELIAAVRKAFDLRPAGIIEMLDLKR---PIYKQTAAYGHFGRTDVDLPWE 382          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_HYPNA (S-adenosylmethionine synthetase OS=Hyphomonas neptunium (strain ATCC 15444) GN=metK PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 58/108 (53.70%), Postives = 71/108 (65.74%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGR---EDPDFTWE 713
            KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV +PLS++VDT+ TG+  +  I + V+E FD  P  I  +L L    N  +  TAAYGHFGR   E   FTWE
Sbjct:  276 KVDRSAAYATRYLAKNIVAAGLATRCTIQVSYAIGVAQPLSIYVDTHGTGQADEARIAKAVRELFDLSPKGIRTHLKL---SNPIYGPTAAYGHFGRIPGEGGTFTWE 380          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_FINM2 (S-adenosylmethionine synthetase OS=Finegoldia magna (strain ATCC 29328) GN=metK PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 51/105 (48.57%), Postives = 72/105 (68.57%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            K DRS AY  R  AK++VA+GL  +C V  SYAIGV +P+S+F++T+ T KI +++I++ + ENFD RP  I   LDL+R     + + A+YGHFGR D D +WE
Sbjct:  279 KTDRSAAYFARYIAKNVVAAGLCDKCEVGFSYAIGVAKPISMFINTFGTNKIEEEKIIQAINENFDARPKAIIDKLDLQR---PIYREVASYGHFGRNDLDLSWE 380          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_ENTFA (S-adenosylmethionine synthetase OS=Enterococcus faecalis GN=metK PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 51/105 (48.57%), Postives = 74/105 (70.48%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS +Y  R  AK+IVA+GLA++  VQ++YAIGV +P+S+ ++T+ T  +P+ +++  V++NFD RP  I   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  279 KVDRSASYAARYIAKNIVAAGLAKKVEVQLAYAIGVAQPVSISINTFGTSDLPESKLIEAVRKNFDLRPAGIIEMLDLRR---PIYKQTAAYGHFGRTDIDLPWE 380          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_CORU7 (S-adenosylmethionine synthetase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=metK PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22
Identity = 57/105 (54.29%), Postives = 69/105 (65.71%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS AY  R  AK+IVA+GLA R  VQV+YAIGV  P+ ++V+T+ T K P ++I R V E FD RP  I   LDL R     + +TAAYGHFGR D D  WE
Sbjct:  285 KVDRSAAYATRWVAKNIVAAGLADRAEVQVAYAIGVARPVGLYVETFGTEKAPVEDIQRAVAEVFDLRPASILRELDLLR---PIYAQTAAYGHFGRNDLDLPWE 386          
The following BLAST results are available for this feature:
BLAST of DN621560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PSEPG3.731e-2249.57S-adenosylmethionine synthetase OS=Pseudomonas put... [more]
METK_PSEP13.731e-2249.57S-adenosylmethionine synthetase OS=Pseudomonas put... [more]
METK_PROMH3.731e-2254.29S-adenosylmethionine synthetase OS=Proteus mirabil... [more]
METK_PROM03.731e-2248.21S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_LACRJ3.731e-2250.48S-adenosylmethionine synthetase OS=Lactobacillus r... [more]
METK_LACRD3.731e-2250.48S-adenosylmethionine synthetase OS=Lactobacillus r... [more]
METK_HYPNA3.731e-2253.70S-adenosylmethionine synthetase OS=Hyphomonas nept... [more]
METK_FINM23.731e-2248.57S-adenosylmethionine synthetase OS=Finegoldia magn... [more]
METK_ENTFA3.731e-2248.57S-adenosylmethionine synthetase OS=Enterococcus fa... [more]
METK_CORU73.731e-2254.29S-adenosylmethionine synthetase OS=Corynebacterium... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O03_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621560 ID=DN621560; Name=DN621560; organism=Citrus sinensis; type=EST; length=715bp
GGCCCCCCCTTTTTTTTTCAGAGATAAGAAGTAGATGAATACTCATAATT
TGATTATGAAGAAAAAAATGCATTAATAGTACATTAACAAATAACAATGT
GTCTCCACAAACGAGCTCTTCTTCCATCTCTATTTCTCTTCCTAGCATAT
CTCATACAGGCAACTTCTCTGTAATTCTTTCATCGACTATGACTCAATTA
GACCACATATATCTTTCTATTATGGCAAAGATAATACAAATTTATTTATA
AAAAAAAAAGGCCAAGACCAAGAGAGAAAAAAGACAGAATCTGACAGGCA
GACGAAAGAACAAGTAAATTATTGAGTTCAAACAAAGAATGAAACTGCAT
ACTTAAATTCTACTCTTGGGGTTTCTCATACTTGAGGGGCTTCACCACCT
CCCATGTGAAGTCAGGATCCTCCCTTCCAAAATGCCCATATGCAGCAGTC
TTCAAAAACCTGCTATTTCCTCCCCTCTTGAGATCCAAGTTAATGGCAAT
CATTCCAGGCCTGAAATCAAAGTTCTCCTTCACAATCCTCAGGATCTCCT
TGTCCGGAATCTTTCCAGTTCGATAAGTGTCAACAAACACTGAAAGGGGC
TCTGGGACACCAATAGCATAAGAAACCTGCACAATGCAGCGGCGAGCAAG
GCCACTGGCAACGATGCTCTTTGCTGCCTGCCTCACAATGTAAGCACCAC
TTCTATCAACCTTGG
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