DN621560

Overview
NameDN621560
Unique NameDN621560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.105e-53
Identity = 102/116 (87.93%), Postives = 109/116 (93.97%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYI RQAAKSIVA+GLARRCIVQ+SYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKE FDFRPGMIAINLDL +GG SR+LKTAAYGHFGR+D DFTWE VKPLK+EKPQ
Sbjct:  281 KVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGG-SRYLKTAAYGHFGRDDADFTWETVKPLKWEKPQ 395          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_ATRNU (S-adenosylmethionine synthetase 1 OS=Atriplex nummularia GN=SAMS1 PE=1 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 9.105e-53
Identity = 102/116 (87.93%), Postives = 109/116 (93.97%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYI RQAAKSIVA+GLARRCIVQ+SYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKE FDFRPGMIAINLDL +GG SR+LKTAAYGHFGR+D DFTWE VKPLK+EKPQ
Sbjct:  281 KVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGG-SRYLKTAAYGHFGRDDADFTWETVKPLKWEKPQ 395          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.189e-52
Identity = 99/114 (86.84%), Postives = 108/114 (94.74%), Query Frame = -3
Query:  372 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEK 713
            KVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGVPEPLSVFVDTY+TGKIPDK+IL ++K+NFDFRPGMI+INLDLKRGGN RF KTAAYGHFGR+DPDF+WE VK LK EK
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKKNFDFRPGMISINLDLKRGGNFRFQKTAAYGHFGRDDPDFSWETVKQLKPEK 390          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK3_VITVI (S-adenosylmethionine synthetase 3 OS=Vitis vinifera GN=METK3 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.553e-52
Identity = 99/111 (89.19%), Postives = 106/111 (95.50%), Query Frame = -3
Query:  381 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 713
            KVDRSGAYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTY+TGKIPDK+IL ++KENFDFRPGMIAINLDLKRGGN RF KTAAYGHFGR+DPDFTWE VK LK
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILDLIKENFDFRPGMIAINLDLKRGGNFRFQKTAAYGHFGRDDPDFTWETVKLLK 387          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK2_DIACA (S-adenosylmethionine synthetase 2 OS=Dianthus caryophyllus GN=SAM2 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.028e-52
Identity = 102/116 (87.93%), Postives = 108/116 (93.10%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYI RQAAKSIVASGLARRCIVQ+SYAIGVPEPLSVFVDTY TGKI D+EIL+IVKENFDFRPGMIAI LDLK+GGN R+LKTAAYGHFGREDPDFTWE  K LK+EKPQ
Sbjct:  281 KVDRSGAYIARQAAKSIVASGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIHDREILKIVKENFDFRPGMIAIALDLKKGGN-RYLKTAAYGHFGREDPDFTWEAAKTLKWEKPQ 395          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.649e-52
Identity = 100/105 (95.24%), Postives = 104/105 (99.05%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKE+FDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGR+DPDFTWE
Sbjct:  277 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWE 381          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.649e-52
Identity = 98/111 (88.29%), Postives = 106/111 (95.50%), Query Frame = -3
Query:  381 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 713
            KVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGVPEPLSVFVDTY+TGKIPD++IL ++KENFDFRPGMIAINLDL RGGNSR+ KTAAYGHFGR+DPDFTWE VK LK
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDRDILELIKENFDFRPGMIAINLDLMRGGNSRYQKTAAYGHFGRDDPDFTWETVKLLK 387          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK3_PICSI (S-adenosylmethionine synthetase 3 OS=Picea sitchensis GN=METK3 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.649e-52
Identity = 98/114 (85.96%), Postives = 106/114 (92.98%), Query Frame = -3
Query:  372 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEK 713
            KVDRSGAYIVRQAAKSIVA+GLARRC+VQVSYAIGVPEPLSVFVD+Y TG IPDK IL ++K+NFDFRPGMI INLDLKRGGN RF KTAAYGHFGR+DPDFTWE+VKPLK EK
Sbjct:  277 KVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVPEPLSVFVDSYGTGTIPDKVILELIKKNFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWEIVKPLKQEK 390          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.649e-52
Identity = 98/114 (85.96%), Postives = 110/114 (96.49%), Query Frame = -3
Query:  372 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEK 713
            KVDRSGAYI RQAAKSI+ASGLARRCIVQ+SYAIGVPEPLSVFVD+Y TGKIPD+EIL++VKENFDFRPGMI+INLDLK+GGN RF+KTAAYGHFGR+D DFTWEVVKPLK++K
Sbjct:  279 KVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMISINLDLKKGGN-RFIKTAAYGHFGRDDADFTWEVVKPLKFDK 391          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_HORVU (S-adenosylmethionine synthetase 1 OS=Hordeum vulgare GN=SAM1 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.460e-52
Identity = 98/114 (85.96%), Postives = 109/114 (95.61%), Query Frame = -3
Query:  372 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEK 713
            KVDRSGAYI RQAAKSI+ASGLARRCIVQ+SYAIGVPEPLSVFVD+Y TGKIPD+EIL++VKENFDFRPGMI INLDLK+GGN RF+KTAAYGHFGR+D DFTWEVVKPLK++K
Sbjct:  279 KVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMITINLDLKKGGN-RFIKTAAYGHFGRDDADFTWEVVKPLKFDK 391          
The following BLAST results are available for this feature:
BLAST of DN621560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_ATRNU9.105e-5387.93S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]
METK1_ATRNU9.105e-5387.93S-adenosylmethionine synthetase 1 OS=Atriplex numm... [more]
METK1_VITVI1.189e-5286.84S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK3_VITVI1.553e-5289.19S-adenosylmethionine synthetase 3 OS=Vitis vinifer... [more]
METK2_DIACA2.028e-5287.93S-adenosylmethionine synthetase 2 OS=Dianthus cary... [more]
METK_CAMSI2.649e-5295.24S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK4_POPTR2.649e-5288.29S-adenosylmethionine synthetase 4 OS=Populus trich... [more]
METK3_PICSI2.649e-5285.96S-adenosylmethionine synthetase 3 OS=Picea sitchen... [more]
METK3_HORVU2.649e-5285.96S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK1_HORVU3.460e-5285.96S-adenosylmethionine synthetase 1 OS=Hordeum vulga... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O03_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621560 ID=DN621560; Name=DN621560; organism=Citrus sinensis; type=EST; length=715bp
GGCCCCCCCTTTTTTTTTCAGAGATAAGAAGTAGATGAATACTCATAATT
TGATTATGAAGAAAAAAATGCATTAATAGTACATTAACAAATAACAATGT
GTCTCCACAAACGAGCTCTTCTTCCATCTCTATTTCTCTTCCTAGCATAT
CTCATACAGGCAACTTCTCTGTAATTCTTTCATCGACTATGACTCAATTA
GACCACATATATCTTTCTATTATGGCAAAGATAATACAAATTTATTTATA
AAAAAAAAAGGCCAAGACCAAGAGAGAAAAAAGACAGAATCTGACAGGCA
GACGAAAGAACAAGTAAATTATTGAGTTCAAACAAAGAATGAAACTGCAT
ACTTAAATTCTACTCTTGGGGTTTCTCATACTTGAGGGGCTTCACCACCT
CCCATGTGAAGTCAGGATCCTCCCTTCCAAAATGCCCATATGCAGCAGTC
TTCAAAAACCTGCTATTTCCTCCCCTCTTGAGATCCAAGTTAATGGCAAT
CATTCCAGGCCTGAAATCAAAGTTCTCCTTCACAATCCTCAGGATCTCCT
TGTCCGGAATCTTTCCAGTTCGATAAGTGTCAACAAACACTGAAAGGGGC
TCTGGGACACCAATAGCATAAGAAACCTGCACAATGCAGCGGCGAGCAAG
GCCACTGGCAACGATGCTCTTTGCTGCCTGCCTCACAATGTAAGCACCAC
TTCTATCAACCTTGG
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