DN621560

Overview
NameDN621560
Unique NameDN621560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK3_ARATH (S-adenosylmethionine synthetase 3 OS=Arabidopsis thaliana GN=METK3 PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.902e-52
Identity = 98/111 (88.29%), Postives = 106/111 (95.50%), Query Frame = -3
Query:  381 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 713
            KVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGVPEPLSVFVDTY+TG IPDK+IL ++KE FDFRPGM+AINLDLKRGGN RF KTAAYGHFGR+DPDFTWEVVKPLK
Sbjct:  277 KVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVPEPLSVFVDTYKTGTIPDKDILVLIKEAFDFRPGMMAINLDLKRGGNFRFQKTAAYGHFGRDDPDFTWEVVKPLK 387          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_PEA (S-adenosylmethionine synthetase 1 (Fragment) OS=Pisum sativum GN=SAMS1 PE=2 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 5.902e-52
Identity = 101/114 (88.60%), Postives = 106/114 (92.98%), Query Frame = -3
Query:  372 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEK 713
            KVDR GAYIVRQAAKSIVASGLARR IVQ+  AIGVPEPLSVFVDTY TGKIPD+EIL+IVKE FDFRPGMI+INLDL RGGN RFLKTAAYGHFGREDPDFTWEVVKPLK+EK
Sbjct:  252 KVDRRGAYIVRQAAKSIVASGLARRAIVQLLRAIGVPEPLSVFVDTYGTGKIPDREILKIVKETFDFRPGMISINLDLLRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWEK 365          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK4_BRAJU (S-adenosylmethionine synthetase 4 OS=Brassica juncea GN=MSAMS4 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.708e-52
Identity = 97/111 (87.39%), Postives = 106/111 (95.50%), Query Frame = -3
Query:  381 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 713
            KVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGVPEPLSVFVDTY+TG IPDK+IL ++KE FDFRPGM+AINLDLKRGGN RF KTAAYGHFGR+DPDFTWEV+KPLK
Sbjct:  277 KVDRSGAYIVRQAAKSVVATGLARRCIVQVSYAIGVPEPLSVFVDTYKTGTIPDKDILVLIKEAFDFRPGMMAINLDLKRGGNFRFQKTAAYGHFGRDDPDFTWEVIKPLK 387          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.007e-51
Identity = 101/115 (87.83%), Postives = 107/115 (93.04%), Query Frame = -3
Query:  369 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKP 713
            KVDRSGAY+ RQAAKSIVAS LARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKENFDFRPG+I INL LKRGG  R+LKTAAYGHFGR+DPDFTWEVVKPL+ EKP
Sbjct:  278 KVDRSGAYVARQAAKSIVASELARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGLITINLGLKRGG-YRYLKTAAYGHFGRDDPDFTWEVVKPLELEKP 391          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK2_HORVU (S-adenosylmethionine synthetase 2 OS=Hordeum vulgare GN=SAM2 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.315e-51
Identity = 97/114 (85.09%), Postives = 109/114 (95.61%), Query Frame = -3
Query:  372 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEK 713
            KVDRSGAYI RQAAKSI+ASGLARRCIVQ+SYAIGVPEPLSVFVD+Y TGKIPD+EIL++VKENFDFRPGMI+INLDLK+GG  RF+KTAAYGHFGR+D DFTWEVVKPLK++K
Sbjct:  279 KVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMISINLDLKKGG-KRFIKTAAYGHFGRDDADFTWEVVKPLKFDK 391          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.243e-51
Identity = 101/117 (86.32%), Postives = 108/117 (92.31%), Query Frame = -3
Query:  363 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQE 713
            KVDRSGAYI RQAAKSIVA+GLARRCIVQ+SYAIGV EPLSVFVDTY TGKI DK+IL+IVKE FDFRPGMIA NLDL RGGN R+LKTAAYGHFGR+D DFTWEVVKPLK+EKPQE
Sbjct:  277 KVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVAEPLSVFVDTYGTGKISDKDILKIVKETFDFRPGMIANNLDLLRGGN-RYLKTAAYGHFGRDDADFTWEVVKPLKWEKPQE 392          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_PICSI (S-adenosylmethionine synthetase 1 OS=Picea sitchensis GN=METK1 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.996e-51
Identity = 99/116 (85.34%), Postives = 107/116 (92.24%), Query Frame = -3
Query:  372 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTG--KIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEK 713
            KVDRSGAYIVRQAAKS+VA+GLARRC+VQVSYAIGVPEPLSVFVDTY TG  KI D EIL+++KENFDFRPGMI+INLDLKRGGN RF KTAAYGHFGREDPDFTWE VK LK+EK
Sbjct:  277 KVDRSGAYIVRQAAKSVVAAGLARRCLVQVSYAIGVPEPLSVFVDTYGTGTGKIQDAEILKLIKENFDFRPGMISINLDLKRGGNMRFQKTAAYGHFGREDPDFTWETVKVLKWEK 392          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK2_PINCO (S-adenosylmethionine synthetase 2 OS=Pinus contorta GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.525e-51
Identity = 97/116 (83.62%), Postives = 105/116 (90.52%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYIVRQAAKSIVA+GLARRC+VQVSYAIGV   LS+FVD+Y TG IPDKEIL I+KE+FDFRPGMI INLDLKRGGN RF KTAAYGHFGR+DPDFTWE VKPLK+EK Q
Sbjct:  277 KVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVRGALSIFVDSYGTGSIPDKEILEIIKEHFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWEKAQ 392          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.522e-51
Identity = 96/111 (86.49%), Postives = 104/111 (93.69%), Query Frame = -3
Query:  381 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 713
            KVDRSGAY+VRQAAKS+VASGLARRCIVQVSYAIGVPEPLSVFVDTY+TGKIPDK+IL ++KENFDFRPGMIAINLDLKRGGN R+ KTAAYGHFGR+D D TWE VK LK
Sbjct:  277 KVDRSGAYVVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKENFDFRPGMIAINLDLKRGGNFRYQKTAAYGHFGRDDADLTWETVKILK 387          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.898e-50
Identity = 96/111 (86.49%), Postives = 104/111 (93.69%), Query Frame = -3
Query:  381 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 713
            KVDRSGAYIVRQAAKS+VASGLARRC+VQVSYAIGV EPLSVFVDTY+TGKI DK+IL ++KENFDFRPGMIAINLDLKRGGN R+ KTAAYGHFGR+DPDFTWE VK LK
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTYKTGKIADKDILALIKENFDFRPGMIAINLDLKRGGNLRYQKTAAYGHFGRDDPDFTWETVKILK 387          
The following BLAST results are available for this feature:
BLAST of DN621560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_ARATH5.902e-5288.29S-adenosylmethionine synthetase 3 OS=Arabidopsis t... [more]
METK1_PEA5.902e-5288.60S-adenosylmethionine synthetase 1 (Fragment) OS=Pi... [more]
METK4_BRAJU7.708e-5287.39S-adenosylmethionine synthetase 4 OS=Brassica junc... [more]
METK_MUSAC1.007e-5187.83S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK2_HORVU1.315e-5185.09S-adenosylmethionine synthetase 2 OS=Hordeum vulga... [more]
METK_MESCR2.243e-5186.32S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK1_PICSI4.996e-5185.34S-adenosylmethionine synthetase 1 OS=Picea sitchen... [more]
METK2_PINCO6.525e-5183.62S-adenosylmethionine synthetase 2 OS=Pinus contort... [more]
METK2_ACTCH8.522e-5186.49S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]
METK1_ACTCH1.898e-5086.49S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O03_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621560 ID=DN621560; Name=DN621560; organism=Citrus sinensis; type=EST; length=715bp
GGCCCCCCCTTTTTTTTTCAGAGATAAGAAGTAGATGAATACTCATAATT
TGATTATGAAGAAAAAAATGCATTAATAGTACATTAACAAATAACAATGT
GTCTCCACAAACGAGCTCTTCTTCCATCTCTATTTCTCTTCCTAGCATAT
CTCATACAGGCAACTTCTCTGTAATTCTTTCATCGACTATGACTCAATTA
GACCACATATATCTTTCTATTATGGCAAAGATAATACAAATTTATTTATA
AAAAAAAAAGGCCAAGACCAAGAGAGAAAAAAGACAGAATCTGACAGGCA
GACGAAAGAACAAGTAAATTATTGAGTTCAAACAAAGAATGAAACTGCAT
ACTTAAATTCTACTCTTGGGGTTTCTCATACTTGAGGGGCTTCACCACCT
CCCATGTGAAGTCAGGATCCTCCCTTCCAAAATGCCCATATGCAGCAGTC
TTCAAAAACCTGCTATTTCCTCCCCTCTTGAGATCCAAGTTAATGGCAAT
CATTCCAGGCCTGAAATCAAAGTTCTCCTTCACAATCCTCAGGATCTCCT
TGTCCGGAATCTTTCCAGTTCGATAAGTGTCAACAAACACTGAAAGGGGC
TCTGGGACACCAATAGCATAAGAAACCTGCACAATGCAGCGGCGAGCAAG
GCCACTGGCAACGATGCTCTTTGCTGCCTGCCTCACAATGTAAGCACCAC
TTCTATCAACCTTGG
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