DN621560

Overview
NameDN621560
Unique NameDN621560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_DAUCA (S-adenosylmethionine synthetase 1 OS=Daucus carota GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.229e-50
Identity = 107/164 (65.24%), Postives = 113/164 (68.90%), Query Frame = -3
Query:  366 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAA------------------------------------------------YGHFGREDPDFTWEVVKPLKYEKPQ 713
            KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPD+EIL+IVKE FDFRPGMI+INLDLKRGGN RFLKTAA                                                YGHFGR+DPDFTWEVVKPLK+EKPQ
Sbjct:  277 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGTGKIPDREILKIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 440          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK3_SOLLC (S-adenosylmethionine synthetase 3 OS=Solanum lycopersicum GN=SAM3 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.741e-49
Identity = 94/111 (84.68%), Postives = 103/111 (92.79%), Query Frame = -3
Query:  381 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 713
            KVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVDTY+TG IPDK+IL ++KENFDFRPGM++INLDL RGGN R+ KTAAYGHFGR+DPDFTWE VK LK
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILVLIKENFDFRPGMMSINLDLLRGGNYRYQKTAAYGHFGRDDPDFTWETVKVLK 387          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.741e-49
Identity = 94/111 (84.68%), Postives = 103/111 (92.79%), Query Frame = -3
Query:  381 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 713
            KVDRSGAYIVRQAAKS+VASGLARRC+VQVSYAIGV EPLSVFVDT++TGKIPDK+IL ++KENFDFRPGMIAINLDLKRGGN R+ KTAA GH GR+DPDFTWE VK LK
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTFKTGKIPDKDILALIKENFDFRPGMIAINLDLKRGGNFRYQKTAALGHLGRDDPDFTWETVKILK 387          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK2_SOLTU (S-adenosylmethionine synthetase 2 OS=Solanum tuberosum GN=METK2 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.741e-49
Identity = 94/111 (84.68%), Postives = 103/111 (92.79%), Query Frame = -3
Query:  381 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 713
            KVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVDTY+TG IPDK+IL ++KENFDFRPGM++INLDL RGGN R+ KTAAYGHFGR+DPDFTWE VK LK
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILVLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVLK 387          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.676e-49
Identity = 93/111 (83.78%), Postives = 103/111 (92.79%), Query Frame = -3
Query:  381 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 713
            KVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVDTY+TG IPDK+IL ++KENFDFRPGM++INLDL RGGN R+ KTAAYGHFGR+DPDF+WE VK LK
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFSWETVKVLK 387          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.107e-49
Identity = 93/110 (84.55%), Postives = 102/110 (92.73%), Query Frame = -3
Query:  384 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPL 713
            KVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVDTY+TG IPDK+IL ++KENFDFRPGM++INLDL RGGN R+ KTAAYGHFGR+DPDFTWE VK L
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVL 386          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.361e-48
Identity = 93/111 (83.78%), Postives = 102/111 (91.89%), Query Frame = -3
Query:  381 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 713
            KVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVDTY+TG IPDK+IL ++KENFDFRPGMIAINLDL RGGN R+ KTAAYGHFGR++ DFTWE VK LK
Sbjct:  277 KVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILALIKENFDFRPGMIAINLDLLRGGNFRYQKTAAYGHFGRDEADFTWETVKALK 387          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.170e-48
Identity = 91/110 (82.73%), Postives = 101/110 (91.82%), Query Frame = -3
Query:  384 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPL 713
            KVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVDTY+TG IP K++L ++KENFDFRPGM++INLDL RGGN R+ KTAAYGHFGR+DPDFTWE VK L
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPGKDVLTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVL 386          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.350e-45
Identity = 84/111 (75.68%), Postives = 99/111 (89.19%), Query Frame = -3
Query:  381 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 713
            KVDRSGAYI RQAAKS+VASGLA+RC+VQVSY+I V EPLSVFVDTY TG +PD EIL++++++FDFRPG+I  NLDLKRGGN R+ KTAAYGHFGR+DPDFTWE VK L+
Sbjct:  280 KVDRSGAYIARQAAKSVVASGLAKRCLVQVSYSIAVAEPLSVFVDTYGTGTMPDAEILKLIRKHFDFRPGLIGKNLDLKRGGNKRYQKTAAYGHFGRDDPDFTWETVKKLE 390          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.729e-39
Identity = 81/111 (72.97%), Postives = 90/111 (81.08%), Query Frame = -3
Query:  384 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD-FTWEVVKPL 713
            KVDRSGAYI RQ AKSIVA+GLARR + Q+SYAIGV +PLS+ VDTY +GKIPD EIL  VKE FDFR GMI  +LDLKRGGN R+  TAAYGHFGR+D D FTWE V PL
Sbjct:  276 KVDRSGAYIARQVAKSIVAAGLARRALFQISYAIGVAQPLSIHVDTYGSGKIPDSEILEKVKEKFDFRAGMIGKSLDLKRGGNKRYQTTAAYGHFGRDDTDVFTWEKVVPL 386          
The following BLAST results are available for this feature:
BLAST of DN621560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_DAUCA4.229e-5065.24S-adenosylmethionine synthetase 1 OS=Daucus carota... [more]
METK3_SOLLC2.741e-4984.68S-adenosylmethionine synthetase 3 OS=Solanum lycop... [more]
METK3_CATRO2.741e-4984.68S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK2_SOLTU2.741e-4984.68S-adenosylmethionine synthetase 2 OS=Solanum tuber... [more]
METK1_TOBAC4.676e-4983.78S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_PETHY6.107e-4984.55S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK2_TOBAC1.361e-4883.78S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK2_PETHY5.170e-4882.73S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK_CHLRE5.350e-4575.68S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK_OSTTA5.729e-3972.97S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O03_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621560 ID=DN621560; Name=DN621560; organism=Citrus sinensis; type=EST; length=715bp
GGCCCCCCCTTTTTTTTTCAGAGATAAGAAGTAGATGAATACTCATAATT
TGATTATGAAGAAAAAAATGCATTAATAGTACATTAACAAATAACAATGT
GTCTCCACAAACGAGCTCTTCTTCCATCTCTATTTCTCTTCCTAGCATAT
CTCATACAGGCAACTTCTCTGTAATTCTTTCATCGACTATGACTCAATTA
GACCACATATATCTTTCTATTATGGCAAAGATAATACAAATTTATTTATA
AAAAAAAAAGGCCAAGACCAAGAGAGAAAAAAGACAGAATCTGACAGGCA
GACGAAAGAACAAGTAAATTATTGAGTTCAAACAAAGAATGAAACTGCAT
ACTTAAATTCTACTCTTGGGGTTTCTCATACTTGAGGGGCTTCACCACCT
CCCATGTGAAGTCAGGATCCTCCCTTCCAAAATGCCCATATGCAGCAGTC
TTCAAAAACCTGCTATTTCCTCCCCTCTTGAGATCCAAGTTAATGGCAAT
CATTCCAGGCCTGAAATCAAAGTTCTCCTTCACAATCCTCAGGATCTCCT
TGTCCGGAATCTTTCCAGTTCGATAAGTGTCAACAAACACTGAAAGGGGC
TCTGGGACACCAATAGCATAAGAAACCTGCACAATGCAGCGGCGAGCAAG
GCCACTGGCAACGATGCTCTTTGCTGCCTGCCTCACAATGTAAGCACCAC
TTCTATCAACCTTGG
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