DN621560

Overview
NameDN621560
Unique NameDN621560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_OSTLU (S-adenosylmethionine synthetase OS=Ostreococcus lucimarinus (strain CCE9901) GN=METK-1 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.729e-39
Identity = 85/112 (75.89%), Postives = 91/112 (81.25%), Query Frame = -3
Query:  384 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGR-EDPD-FTWEVVKPL 713
            KVDRSGAYI RQAAKS+VA+GLARRC+ Q+SYAIGV EPLSV VDTY TGKIPD EIL  VK  FDFRPGM+   LDLKRGGN R+  TAAYGHFGR ED D FTWE V PL
Sbjct:  276 KVDRSGAYISRQAAKSVVAAGLARRCLFQISYAIGVAEPLSVHVDTYGTGKIPDSEILAKVKAAFDFRPGMMGKALDLKRGGNKRYQTTAAYGHFGRDEDLDIFTWEKVVPL 387          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.164e-37
Identity = 75/95 (78.95%), Postives = 84/95 (88.42%), Query Frame = -3
Query:  429 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHF 713
            KVDRSGAYIVR+AAKSIVA+GLARRC+VQVSYAIGVPEPLSVFVD+Y TGKIPD+EIL IVKE FDFRPGMI+I+LDL RGGN RF + +    F
Sbjct:  279 KVDRSGAYIVREAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGKIPDREILNIVKEAFDFRPGMISISLDLLRGGNGRFFEDSCIWTF 373          

HSP 2 Score: 26.5646 bits (57), Expect = 2.164e-37
Identity = 8/10 (80.00%), Postives = 8/10 (80.00%), Query Frame = -2
Query:  427 FEDCCIWAFW 456
            FED CIW FW
Sbjct:  365 FEDSCIWTFW 374          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.367e-32
Identity = 73/111 (65.77%), Postives = 82/111 (73.87%), Query Frame = -3
Query:  381 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 713
            KVDRSGAY  R  AKS+VA+GLA RC+VQVSY+IGV +PLSVFVDTY TGK  D EIL I+  NFD RPG +  +L L R     F KTA+ GHFGR DPDFTWE VK LK
Sbjct:  276 KVDRSGAYAARWIAKSLVAAGLADRCLVQVSYSIGVAKPLSVFVDTYGTGKKTDAEILAIIDNNFDLRPGCLMRDLQLTR---PIFQKTASGGHFGRNDPDFTWETVKELK 383          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_SYNWW (S-adenosylmethionine synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=metK PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.375e-29
Identity = 62/105 (59.05%), Postives = 81/105 (77.14%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS +Y++R  AK+IVA+GLA RC +QV+YAIGV  PLS+ V+T+ TGKI D +I+ ++K+NFD RP  I  +LDL+R     + KTAAYGHFGRED +FTWE
Sbjct:  281 KVDRSASYMLRYVAKNIVAAGLAERCEIQVAYAIGVANPLSINVNTFGTGKISDDKIIELIKKNFDLRPAAIIRDLDLRR---PIYRKTAAYGHFGREDAEFTWE 382          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_COXBU (S-adenosylmethionine synthetase OS=Coxiella burnetii GN=metK PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.484e-28
Identity = 63/105 (60.00%), Postives = 77/105 (73.33%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+T+ TGKI +  I +++KE+FD RPG I   L+L R   S +  TA YGHFGRE+P+FTWE
Sbjct:  271 KVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_COXBR (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metK PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.484e-28
Identity = 63/105 (60.00%), Postives = 77/105 (73.33%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+T+ TGKI +  I +++KE+FD RPG I   L+L R   S +  TA YGHFGRE+P+FTWE
Sbjct:  271 KVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_COXB2 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuG_Q212) GN=metK PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.484e-28
Identity = 63/105 (60.00%), Postives = 77/105 (73.33%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+T+ TGKI +  I +++KE+FD RPG I   L+L R   S +  TA YGHFGRE+P+FTWE
Sbjct:  271 KVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_COXB1 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuK_Q154) GN=metK PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.484e-28
Identity = 63/105 (60.00%), Postives = 77/105 (73.33%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+T+ TGKI +  I +++KE+FD RPG I   L+L R   S +  TA YGHFGRE+P+FTWE
Sbjct:  271 KVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_CELJU (S-adenosylmethionine synthetase OS=Cellvibrio japonicus (strain Ueda107) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.943e-28
Identity = 62/105 (59.05%), Postives = 80/105 (76.19%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS AY  R  AK+IVA+GLA +C +QVSYAIGV EP S+ ++T+ TGK+PD EI+++V+E+FD RP  +   L+LKR     + +TAAYGHFGRE PDFTWE
Sbjct:  271 KVDRSAAYAGRYVAKNIVAAGLADKCEIQVSYAIGVAEPTSISINTFGTGKLPDAEIIKLVREHFDLRPRGLIEMLNLKR---PIYRQTAAYGHFGRELPDFTWE 372          
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_PELCD (S-adenosylmethionine synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metK PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.324e-27
Identity = 61/105 (58.10%), Postives = 77/105 (73.33%), Query Frame = -3
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS +Y+ R  AK++VA+ LAR+C VQ++YAIGV EP+S+ V+T+ TG +P  EI RIV+E FD RP  I   LDL R     + KTAAYGHFGRE P+FTWE
Sbjct:  274 KVDRSASYMARYVAKNVVAAKLARKCEVQIAYAIGVAEPVSIMVNTFGTGVLPSNEIARIVREEFDMRPAAIIETLDLLR---PIYRKTAAYGHFGRELPEFTWE 375          
The following BLAST results are available for this feature:
BLAST of DN621560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_OSTLU5.729e-3975.89S-adenosylmethionine synthetase OS=Ostreococcus lu... [more]
METK2_PEA2.164e-3778.95S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK_DICDI1.367e-3265.77S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK_SYNWW5.375e-2959.05S-adenosylmethionine synthetase OS=Syntrophomonas ... [more]
METK_COXBU3.484e-2860.00S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXBR3.484e-2860.00S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB23.484e-2860.00S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB13.484e-2860.00S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_CELJU5.943e-2859.05S-adenosylmethionine synthetase OS=Cellvibrio japo... [more]
METK_PELCD1.324e-2758.10S-adenosylmethionine synthetase OS=Pelobacter carb... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O03_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621560 ID=DN621560; Name=DN621560; organism=Citrus sinensis; type=EST; length=715bp
GGCCCCCCCTTTTTTTTTCAGAGATAAGAAGTAGATGAATACTCATAATT
TGATTATGAAGAAAAAAATGCATTAATAGTACATTAACAAATAACAATGT
GTCTCCACAAACGAGCTCTTCTTCCATCTCTATTTCTCTTCCTAGCATAT
CTCATACAGGCAACTTCTCTGTAATTCTTTCATCGACTATGACTCAATTA
GACCACATATATCTTTCTATTATGGCAAAGATAATACAAATTTATTTATA
AAAAAAAAAGGCCAAGACCAAGAGAGAAAAAAGACAGAATCTGACAGGCA
GACGAAAGAACAAGTAAATTATTGAGTTCAAACAAAGAATGAAACTGCAT
ACTTAAATTCTACTCTTGGGGTTTCTCATACTTGAGGGGCTTCACCACCT
CCCATGTGAAGTCAGGATCCTCCCTTCCAAAATGCCCATATGCAGCAGTC
TTCAAAAACCTGCTATTTCCTCCCCTCTTGAGATCCAAGTTAATGGCAAT
CATTCCAGGCCTGAAATCAAAGTTCTCCTTCACAATCCTCAGGATCTCCT
TGTCCGGAATCTTTCCAGTTCGATAAGTGTCAACAAACACTGAAAGGGGC
TCTGGGACACCAATAGCATAAGAAACCTGCACAATGCAGCGGCGAGCAAG
GCCACTGGCAACGATGCTCTTTGCTGCCTGCCTCACAATGTAAGCACCAC
TTCTATCAACCTTGG
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