DN621555

Overview
NameDN621555
Unique NameDN621555
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 2.961e-53
Identity = 91/152 (59.87%), Postives = 112/152 (73.68%), Query Frame = 1
Query:  151 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597
            WQ  HATFY              YG+LYSQGYGT  AALSTALFN+G SCG CY++ C+    P+WC PG ++ +TATNFCPPN  L +DNGGWCNPP  HFDMA+PA+ +I  Y AGI+P+ ++R+PC KKGG+RFT+NGH YFNLVL+TN
Sbjct:   34 WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTN 185          
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 8.615e-53
Identity = 91/153 (59.48%), Postives = 112/153 (73.20%), Query Frame = 1
Query:  148 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN--DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597
            GW   HATFY              YGNLY+QGYGT TAALSTALFN+GL+CG CY++ C+   D  WC PG S+ +TATNFCPPN  L +D+GGWCNPP  HFDMA+PA+ +I  YR GI+P+ ++R+PC KKGG+RFT+NGH YF LVL+TN
Sbjct:   33 GWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPGVSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTN 185          
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 1.919e-52
Identity = 91/152 (59.87%), Postives = 111/152 (73.03%), Query Frame = 1
Query:  151 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597
            W   HATFY              Y +LYSQGYGT  AALSTALFN+G SCG CY++ C+    P+WC PG ++ VTATNFCPPN  L +DNGGWCNPP  HFDMA+PA+ +I  YRAGI+P+ ++R+PC KKGG+RFT+NGH YFNLVL+TN
Sbjct:   50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTN 201          
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 5.584e-52
Identity = 92/153 (60.13%), Postives = 111/153 (72.55%), Query Frame = 1
Query:  148 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN--DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597
            GW  G ATFY              YGNLY+QGYGT TAALSTALF++G SCG CY + C+   DP+WC  G S+ VTATNFCPPN AL +D+GGWCNPP  HFDMA+PA+ +I  YR GIVP++FRR+PC ++GG+RFTV G  YF LVL+TN
Sbjct:   33 GWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTN 185          
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 7.293e-52
Identity = 92/153 (60.13%), Postives = 113/153 (73.86%), Query Frame = 1
Query:  148 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEND--PKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597
            GW   HATFY              YGNLY+ GY TNTAALSTALFN+G SCG CY++ C+    P+WCL G SI +TATNFCPPN A ++DNGGWCNPP  HFDMA+PAFL IA+Y+AGIVPI ++++ C + GG+RFT+NG +YF LVLI+N
Sbjct:   27 GWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISN 179          
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 9.525e-52
Identity = 90/153 (58.82%), Postives = 115/153 (75.16%), Query Frame = 1
Query:  148 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN--DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597
            GW SG ATFY              YGNLY  GYGTNTAALS+ALFN+G SCG CY++ C++  +P+WCL G ++ +T TN CPPN ALS+++GGWCNPP  HFDMAEPA+LQI  Y+AGIVP+ ++R+PC K+GG+RFT+ G +YF LVLI+N
Sbjct:   31 GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISN 183          
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.375e-50
Identity = 92/151 (60.93%), Postives = 108/151 (71.52%), Query Frame = 1
Query:  151 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN-DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597
            W    ATFY              YG+LY  GYGT TAALSTALFN G SCG+C+ + C+    +WC PG SI VTATNFCPPN ALS D GGWCNPP +HFDM++PA+  IA YRAGIVP+++RR+PC + GGIRF VNGHSYF LVL+TN
Sbjct:   25 WTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTN 175          
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.375e-50
Identity = 91/153 (59.48%), Postives = 111/153 (72.55%), Query Frame = 1
Query:  148 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN--DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597
            G  +GHATFY              YG+LYS GYGT TAALSTALFN+G SCG CY + C++  D +WCL G S+++TATNFCPPN AL N+NGGWCNPPL+HFDMA+PA+ +I  YR GIVP+ F+R+ C KKGG+RF +NG  YF LV I N
Sbjct:   25 GLTNGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQN 177          
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 5.226e-50
Identity = 89/153 (58.17%), Postives = 109/153 (71.24%), Query Frame = 1
Query:  148 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN--DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597
            GW    ATFY              YG+LYS GYGTNTAALST LFN+G SCG CY + C+   D ++C+ G S+ +TATN CPPN AL ND GGWCNPP QHFDMAEPA+L+I  Y  GIVP+ ++R+PCAK+GG+RFT+NG  YF LVL++N
Sbjct:   33 GWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGTSVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSN 185          
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 8.915e-50
Identity = 88/159 (55.35%), Postives = 114/159 (71.70%), Query Frame = 1
Query:  145 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN----DPKWCLPG----SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597
            G W   HATFY              YGN Y QGYGT+TAALS  +F +GLSCG+C+E++C      D + CLP     SI+VTAT+ CP N AL  D GGWCNPPL HFD+++PAFL+IA++++GIVP+S+RR+ C +KGG+RFT+NGHSYFNLVL++N
Sbjct:   28 GRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSN 186          
The following BLAST results are available for this feature:
BLAST of DN621555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
EXP14_ORYSJ2.961e-5359.87Expansin-A14 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP13_ORYSJ8.615e-5359.48Expansin-A13 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP24_ORYSJ1.919e-5259.87Expansin-A24 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP29_ORYSJ5.584e-5260.13Expansin-A29 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP17_ARATH7.293e-5260.13Putative expansin-A17 OS=Arabidopsis thaliana GN=E... [more]
EXP15_ORYSJ9.525e-5258.82Expansin-A15 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA8_ORYSJ1.375e-5060.93Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP11_ARATH1.375e-5059.48Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=... [more]
EXPA1_ORYSJ5.226e-5058.17Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP21_ORYSJ8.915e-5055.35Expansin-A21 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621555 ID=DN621555; Name=DN621555; organism=Citrus sinensis; type=EST; length=599bp
ATCTCTCTTTTTCTTTACAAAAAAACACATAAACATAAGCAGCCAGCAGT
AGCAGCCATGACCAATATTGCAGCATCATCTAGTGTTGCTCTCCTTTTGT
TTGTGCTCAATTTTTGCTTTCGTGGCACATTTGGAGACTATGGTGGTGGG
TGGCAAAGTGGCCATGCAACTTTCTATGGCGGGGGTGATGCTTCCGGCAC
AATGGGTGGTGCTTGTGGGTATGGCAATTTGTACAGCCAAGGCTATGGGA
CTAACACTGCAGCACTCAGTACCGCTCTATTCAACAATGGCCTAAGCTGT
GGTTCATGCTATGAAATGAAATGTGAAAATGACCCCAAGTGGTGCCTCCC
CGGCTCCATCATTGTCACCGCCACCAACTTCTGCCCACCTAACCTTGCCC
TGTCTAACGACAACGGCGGTTGGTGCAATCCTCCCCTCCAGCACTTTGAC
ATGGCTGAGCCCGCTTTCTTGCAAATTGCCCAATACCGCGCCGGTATCGT
CCCAATTTCCTTCAGAAGGATCCCGTGTGCGAAGAAAGGAGGAATAAGGT
TTACCGTCAATGGACACTCATACTTCAACCTGGTTTTGATCACAAATGT
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