DN621555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 1.521e-49 Identity = 87/163 (53.37%), Postives = 113/163 (69.33%), Query Frame = 1 Query: 124 GTFGDYGG-----GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597 G +GG GW G ATFY YG+L+ QGYG TAALSTALFNNG CG+CYE+ CE+ P+WCLPGSI +TATNFCPP+ NDN WCNPP +HFD+++P FL+IA+Y+AG+VP+ FRR+PCAK GG++F + G+ +F ++L N Sbjct: 76 GALPSHGGQVPHSGWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFCPPDFTKPNDN--WCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYN 236
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 2.594e-49 Identity = 88/156 (56.41%), Postives = 112/156 (71.79%), Query Frame = 1 Query: 133 GDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597 G + G W + HATFY YGNLYSQGYG TAALSTALF+ GLSCG+C+E+ C NDP+WC+ G SI+VTATNFCPP GG C+PP HFD+++P + +IA Y++GI+P+ +RR+ C + GGIRFT+NGHSYFNLVL+TN Sbjct: 32 GGHMGPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCPP--------GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTN 179
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 7.547e-49 Identity = 87/149 (58.39%), Postives = 112/149 (75.17%), Query Frame = 1 Query: 157 SGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE-NDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597 SG ATFY YGNLYS GYGTNTAALS+ALFN+G +CG CY++ C+ ++ KWC G S+ +TATN CPP+ + +++GGWCNPP QHFDMA+PA+ QI YR GIVP++F+R+ C +KGG+RFT+NG+SYF LVLITN Sbjct: 26 SGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITN 174
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 4.892e-48 Identity = 88/164 (53.66%), Postives = 110/164 (67.07%), Query Frame = 1 Query: 115 CFRGTFGDYGGGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE--NDPKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597 C GGW SG ATFY YGNLY+QGYG AALSTALFN G SCG CY + C+ P+WC G+ + +TATN CPPN AL+ND+GGWCNPP HFDM++PA+ I YRAGIVP+ ++++ C ++GG+RFTV+G +YF LVLITN Sbjct: 15 CITSASAAAAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGTAVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITN 178
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 7.064e-47 Identity = 83/153 (54.25%), Postives = 105/153 (68.63%), Query Frame = 1 Query: 145 GGWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGS--IIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597 G W+ HATFY Y + +GYG T A+ST LF G CG+CYE+KC + P C G+ ++VTATN CPPN SNDNGGWCNPP +HFD++ PAFLQIAQ +AGIVPIS+RR+PC K GGIR+T+ G+ YFNLV+++N Sbjct: 40 GPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSN 192
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 2.684e-46 Identity = 83/151 (54.97%), Postives = 107/151 (70.86%), Query Frame = 1 Query: 154 QSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCE-NDPKWCLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597 QS ATFY YGNLY+ GYG AALS+ALFN+G CG+CY + C+ + KWC PG SI +TATN CPPN AL +++GGWCNPP QHFDM++PA+ IA Y+AGIVP++++R+PC + GGIRF ++GH YF LV +TN Sbjct: 29 QSAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTN 179
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 4.579e-46 Identity = 82/153 (53.59%), Postives = 109/153 (71.24%), Query Frame = 1 Query: 148 GWQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCEN--DPKWCLPGSII-VTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597 GW G ATFY YGNLY+ GYGTNTAALS+ LFN+G SCG CY + C+ P+WC G+ + +TATN CPPN AL +++GGWCNPP HFDMAEPA+LQI Y+AGI+P+ ++++ C ++GGIRFT+ G ++F LVL++N Sbjct: 26 GWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSN 178
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 7.810e-46 Identity = 79/149 (53.02%), Postives = 103/149 (69.13%), Query Frame = 1 Query: 151 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597 W ATFY YG+L+ QGYG TAALSTALFN G +CG+CY++ C NDP+WCLPGS+ +TATNFCPP+ S G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F G+ YF ++L N Sbjct: 48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPD--YSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYN 194
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 1.332e-45 Identity = 80/149 (53.69%), Postives = 104/149 (69.80%), Query Frame = 1 Query: 151 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597 W ATFY YGNL+ QGYG TAALSTALFN+G +CG+CYE+ C DP+WCLPGS+ +TATNFCP N + + D WCNPP +HFD++ FL+IA+Y+AG+VP+ +RRIPC+K GG++F G+ YF +VLI N Sbjct: 58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYN 204
BLAST of DN621555 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 1.332e-45 Identity = 80/149 (53.69%), Postives = 104/149 (69.80%), Query Frame = 1 Query: 151 WQSGHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITN 597 W ATFY YGNL+ QGYG TAALSTALFN+G +CG+CYE+ C DP+WCLPGS+ +TATNFCP N + + D WCNPP +HFD++ FL+IA+Y+AG+VP+ +RRIPC+K GG++F G+ YF +VLI N Sbjct: 52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYN 198 The following BLAST results are available for this feature:
BLAST of DN621555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621555 ID=DN621555; Name=DN621555; organism=Citrus sinensis; type=EST; length=599bpback to top |