DN621554
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621554 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.814e-13 Identity = 46/138 (33.33%), Postives = 74/138 (53.62%), Query Frame = -2 Query: 277 GGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG-GIRFTVN--GHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSL----SFQLTASDGRTVTSNNVVPGNW 648 GG C HFDM+ + +A+ AGI+ + +RR+PC G I F V+ + ++ VLI G GD+++V + + GW M +NWG W+ NS G++L S +LT+ G+ + +NNV+P +W Sbjct: 143 GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWRYNSN-TGKALKAPFSLRLTSDSGKVLVANNVIPASW 279
BLAST of DN621554 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 44/144 (30.56%), Postives = 71/144 (49.31%), Query Frame = -2 Query: 277 GGWCNPPLQHFDMAEPAFLQIAQ-------YRAGIVPISFRRIPCAKKG---GIRFTVNGHSYFNLVLITNVGGAGDVHSVSI-----KGSKTGWQAMSRNWGQNWQSNSYLNGQS-----LSFQLTASDGRTVTSNNVVPGNW 648 GG C HFD++ AF +A+ AG +P+ + R+PC +G R + Y+ VL+ + G GD+ +V + G W AM ++WG W+ NS G + +S +LT+ GRT+ ++NV+P W Sbjct: 117 GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNS---GPAPLQAPMSIRLTSGSGRTLVASNVIPAGW 257
BLAST of DN621554 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 45/138 (32.61%), Postives = 72/138 (52.17%), Query Frame = -2 Query: 277 GGWCNPPLQHFDMAEPAFLQIA------QYRA-GIVPISFRRIPCAKKGGIRFT----VNGHSYFNLVLITNVGGAGDVHSVSIK--GSKTGWQAMSRNWGQNWQSNSYLNGQS-LSFQLTASDGRTVTSNNVVPGNW 648 GG C HFD++ AF +A Q RA G++ I + R+PC GG++ T V + + VL+ G GD+ V + G+ W M ++WG W+ N+ Q+ S +LT+S G+T+ ++NV+P W Sbjct: 116 GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKTLVASNVIPSGW 252 The following BLAST results are available for this feature:
BLAST of DN621554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621554 ID=DN621554; Name=DN621554; organism=Citrus sinensis; type=EST; length=679bpback to top |