DN621551

Overview
NameDN621551
Unique NameDN621551
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621551 vs. ExPASy Swiss-Prot
Match: THI4_FERNB (Putative thiazole biosynthetic enzyme OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1422 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.150e-13
Identity = 43/144 (29.86%), Postives = 74/144 (51.39%), Query Frame = 2
Query:  263 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNW 694
            +K+  +S+ + + Y   +    + D    G G + L+ A EL+KN   ++AI E    PGGG W  G +F+ +V+      +L E  I Y ++D ++V+   A+  ++ M     +    +FN V  EDL++   R+ GVV NW
Sbjct:    3 MKDLKISQLIVKHYFQKLNDVLNVDVAIAGCGPSALALATELAKNGR-KVAIFEAKNEPGGGIWGGGMMFNELVLESELEWYLKEHHIKYKKEDEFIVVD--AVHFASAMLYNATKNGAYIFNNVFVEDLVMYNERISGVVINW 143          
BLAST of DN621551 vs. ExPASy Swiss-Prot
Match: THI4_HALSA (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarium GN=VNG_2604G PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.562e-13
Identity = 47/153 (30.72%), Postives = 79/153 (51.63%), Query Frame = 2
Query:  254 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGI--DYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALV 703
            F    E+ V+R +TR++  + +   +TD    G G +GL  A EL+   ++ + IIE++   GGG WL G L + + VR PA   LD+LG+  +YDE++  + +  A    S +++        ++ N     D++V+    V G V NW  V
Sbjct:    6 FADANEAEVTRAITRQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVADAPHACSAMIT-AACDAGARIQNMTEFTDIVVRDDHAVAGAVVNWTPV 156          
BLAST of DN621551 vs. ExPASy Swiss-Prot
Match: THI4_HALS3 (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE4651F PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.562e-13
Identity = 47/153 (30.72%), Postives = 79/153 (51.63%), Query Frame = 2
Query:  254 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGI--DYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGR-VGGVVTNWALV 703
            F    E+ V+R +TR++  + +   +TD    G G +GL  A EL+   ++ + IIE++   GGG WL G L + + VR PA   LD+LG+  +YDE++  + +  A    S +++        ++ N     D++V+    V G V NW  V
Sbjct:    6 FADANEAEVTRAITRQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVADAPHACSAMIT-AACDAGARIQNMTEFTDIVVRDDHAVAGAVVNWTPV 156          
BLAST of DN621551 vs. ExPASy Swiss-Prot
Match: THI4_METMA (Putative thiazole biosynthetic enzyme OS=Methanosarcina mazei GN=MM_0222 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.346e-13
Identity = 48/152 (31.58%), Postives = 78/152 (51.32%), Query Frame = 2
Query:  263 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVS 706
            + E I++R +   Y    + Y D D    G G A L  A  L++    ++AI EQ +S GGG W  G +F  +VV++ A   LD+ GI Y E +    + ++       + KL+A       ++FN V+ ED++++   RV G+V NW  V+
Sbjct:    3 LDEVIITRAIFEEYSKTFLEYTDIDVALVGGGPANLVAAKYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRVLDDFGIRYKEYEPGYFVANSV----ESVGKLIAGATSAGAEVFNLVSFEDIMIRENDRVTGIVINWGPVT 149          
BLAST of DN621551 vs. ExPASy Swiss-Prot
Match: THI4_METBF (Putative thiazole biosynthetic enzyme OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A2100 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.370e-13
Identity = 49/151 (32.45%), Postives = 75/151 (49.67%), Query Frame = 2
Query:  263 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSM 709
            + E I++R +   Y    + Y + D    G G A L  A  L++    ++AI EQ +S GGG W  G +F  +VV++ A   LD+ GI Y E Q  Y V          I     A    ++FN V+ ED++++   RV G+V NW  V++
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTEVDVALIGGGPANLVAARYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRILDDFGIRYKEYQPGYYVANSVESVGKLISGATSA--GAEVFNLVSFEDVMIRENDRVTGIVVNWGPVTV 150          
BLAST of DN621551 vs. ExPASy Swiss-Prot
Match: THI4_HALMA (Putative thiazole biosynthetic enzyme OS=Haloarcula marismortui GN=rrnAC1782 PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.370e-13
Identity = 47/156 (30.13%), Postives = 81/156 (51.92%), Query Frame = 2
Query:  251 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDY----DEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALV 703
            +F  + E+ V+R + + +  + + ++D+D    G G +GL  A EL++   +Q+ ++E++   GGG WL G L + + VR PA   LDEL +D+    D +  YV     A    + + K       K+ N     D++++   RVGG+V NW  V
Sbjct:    9 QFSDVGEAEVTRAIGQEWTEEFMDFSDSDVIIVGGGPSGLMAAKELAER-GVQVMVVEKNNYLGGGFWLGGFLMNKVTVRDPAQQVLDELEVDHKRSKDSEGLYVANGPEA---CSGLIKAACDAGAKMQNMTEFTDIVIREDHRVGGIVMNWTPV 160          
BLAST of DN621551 vs. ExPASy Swiss-Prot
Match: THI4_AERPE (Putative thiazole biosynthetic enzyme OS=Aeropyrum pernix GN=APE_2149.1 PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.707e-13
Identity = 43/150 (28.67%), Postives = 76/150 (50.67%), Query Frame = 2
Query:  254 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALV 703
            F  + E+ V+  +   + + +  +  +D    GAG AGL+ A+ L++    ++ I+EQ+   GGG WL G   + + +R PA   LDEL + Y+     +      L  + + ++ L     ++ N    +D+IV+  RV GVV NW+ V
Sbjct:    3 FARVNEADVTEAILDGFYSSLKKHLRSDVIVVGAGPAGLTAAWRLAE-AGARVLIVEQNNYLGGGLWLGGYFMNPVTIRAPAQRILDELEVPYEAVKPGLYRTKGPLLAAKLAARAL-EAGAEVLNLTMLDDVIVENSRVAGVVVNWSPV 150          
BLAST of DN621551 vs. ExPASy Swiss-Prot
Match: THI4_HALWD (Putative thiazole biosynthetic enzyme OS=Haloquadratum walsbyi (strain DSM 16790) GN=HQ1276A PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.735e-13
Identity = 52/156 (33.33%), Postives = 80/156 (51.28%), Query Frame = 2
Query:  251 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDS----YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALV 703
            +F  + E+ V+R + + +  + I   DT+    G G +GL  A EL++   + + I+E++   GGG WL G L + + VR PA   LDEL + Y+E D     YV     A+ +S I S   A   V+  N     D++ +   RVGG+V NW  V
Sbjct:    5 EFADVSEAQVTRAIAKDWGNEFIDRVDTEVIIVGGGPSGLVTAKELAER-GVDVTIVEKNNYLGGGFWLGGFLMNKVTVRDPAQSVLDELDVPYEESDEASGLYVADGPHAV-SSLIKSACDAGAEVQ--NMTEFTDVVTRENHRVGGIVLNWTPV 156          
BLAST of DN621551 vs. ExPASy Swiss-Prot
Match: THI4_NATPD (Putative thiazole biosynthetic enzyme OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=NP5174A PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.271e-12
Identity = 45/153 (29.41%), Postives = 79/153 (51.63%), Query Frame = 2
Query:  251 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYD-EQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALV 703
            +F  + E+ V+R + + +  + + ++D+D    G G +GL  A ELS+   +Q  ++E++   GGG WL G L + + VR PA   L++L +D+   QDS  +         + + K       K+ N     D++++   RVGG+V NW  V
Sbjct:    6 QFSDVGEAEVTRAIGQEWTEEFMDFSDSDVIIVGGGPSGLMAAKELSER-GVQTMVVEKNNYLGGGFWLGGFLMNKVTVRDPAQNVLEDLDVDFKRSQDSEGLYVANGPEACSGLIKAACDAGAKMQNMTEFTDIVIREDHRVGGIVMNWTPV 157          
BLAST of DN621551 vs. ExPASy Swiss-Prot
Match: THI4_SULAC (Putative thiazole biosynthetic enzyme OS=Sulfolobus acidocaldarius GN=Saci_0854 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.832e-12
Identity = 45/158 (28.48%), Postives = 78/158 (49.37%), Query Frame = 2
Query:  242 NTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSM 709
            ++ K   I E  +SR + ++ M D + + + D    GAG AG+S AY L+K+  ++  + E+ +S GGG      LF  +V+  PA   L E+ I  ++ +  V I  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M
Sbjct:    3 DSIKIKAIDEVKISRYIIKQTMEDWMNFVENDVVIVGAGPAGMSAAYYLAKH-GLKTLVFERRLSFGGGIGGGAMLFHKLVIESPADEVLKEMNIRLEKVEDGVYIVDSAEFMAKLAASAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM 158          
The following BLAST results are available for this feature:
BLAST of DN621551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
THI4_FERNB1.150e-1329.86Putative thiazole biosynthetic enzyme OS=Fervidoba... [more]
THI4_HALSA2.562e-1330.72Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_HALS32.562e-1330.72Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_METMA3.346e-1331.58Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METBF4.370e-1332.45Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_HALMA4.370e-1330.13Putative thiazole biosynthetic enzyme OS=Haloarcul... [more]
THI4_AERPE5.707e-1328.67Putative thiazole biosynthetic enzyme OS=Aeropyrum... [more]
THI4_HALWD9.735e-1333.33Putative thiazole biosynthetic enzyme OS=Haloquadr... [more]
THI4_NATPD1.271e-1229.41Putative thiazole biosynthetic enzyme OS=Natronomo... [more]
THI4_SULAC4.832e-1228.48Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06N22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621551 ID=DN621551; Name=DN621551; organism=Citrus sinensis; type=EST; length=735bp
CAATTACTTCTCATTATCAAACTTCTAAGCAGCAGGGGAAGGAGGGGTAA
AAAAAAAAAACATGGCAGCCATGGCTTCTACAGCTTTCGCTCCTTCAGTT
TCGTCTACCACCAATAAGCTCTTTGACTCATCCTTTCATGGGGCTCCCAT
GTCACCTTCTCTTCTACGTCTTCAACCCATCAAATCTTCTCGTCCCAACA
ACTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGACTTGAACACTTTC
AAGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTGAAATGACGCGCAG
GTACATGACGGACATGATCACTTATGCTGACACTGATGTGGTAGTGGTTG
GTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCTCAGCAAAAACCCC
AACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCCCGGCGGTGGCGC
GTGGCTCAGTGGACAGCTCTTCTCTGCCATGGTTGTGCGCAAACCAGCCC
ACATCTTCCTTGACGAGCTTGGCATCGACTACGATGAGCAAGACAGCTAT
GTTGTGATCAAGCATGCAGCGCTGTTCACCTCCACTATAATGAGCAAGCT
CCTGGCCCGCCCCAACGTCAAGCTCTTTAATGCAGTGGCAGCCGAGGACT
TGATAGTCAAAGGCGGCAGAGTTGGTGGTGTGGTGACCAACTGGGCGTTG
GTGTCAATGAATCACGATACACAGTCTTGCATGGA
back to top