DN621544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.029e-42 Identity = 85/125 (68.00%), Postives = 100/125 (80.00%), Query Frame = -2 Query: 306 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 680 LNQMDGFD NVKVIMATNRADT+DPALLRPGRLDRKIEFPLPDRRQKRLVF T+KM+L+D VD+E V RP+KIS A+I +ICQEAGM AVR +RY++ +DFE+ Y V++ T FY Sbjct: 262 LNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDFEEAYSKVVERSGTQPAFY 386
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.099e-39 Identity = 85/129 (65.89%), Postives = 99/129 (76.74%), Query Frame = -2 Query: 303 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP-LPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDT--DFEFYK 680 L QMDGFDQ+ NVKVIMATNRADTLDPALLRPGRLDRKIEFP L DRR++RL+F +KM+L+ E DL+ + R D +S A IAAI QEAG+ AVRKNRYVIL D E+ Y T VK +T F+FYK Sbjct: 300 LTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPYLRDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEAYATQVKTDNTVDKFDFYK 428
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.903e-39 Identity = 88/128 (68.75%), Postives = 98/128 (76.56%), Query Frame = -2 Query: 303 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP-LPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTD-FEFYK 680 L QMDGFDQ NVKVIMATNRADTLDPALLRPGRLDRKIEFP DRRQ+RLVFQ TAKM LS EVDL+ ++ RPD S A+IAAI Q+AG+ AVRK+R VIL D E+ Y VK D + F FYK Sbjct: 262 LTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEAYARAVKPTDMEQFAFYK 389
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.470e-36 Identity = 82/130 (63.08%), Postives = 98/130 (75.38%), Query Frame = -2 Query: 303 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFP-LPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPK-DFEKGYRTNVK--KPDTDFEFYK 680 LNQMDGF+Q+ NVKVIMATNRADTLDPALLRPGRLDRKIEFP L DRR++RL+F +KM+LS EVDL+ + R + +S A IAAI QEAG+ AVRKNRY I+P+ D E Y VK + EFY+ Sbjct: 294 LNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIPRSDLEDAYAAQVKTGQEADRLEFYR 423
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.792e-32 Identity = 68/124 (54.84%), Postives = 91/124 (73.39%), Query Frame = -2 Query: 324 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKG-----YRTNVKKPD 680 LNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +F++ TAKMNLS++V+LE++V D +S A+I AIC E+G+ A+R+ R + DF+K YR P+ Sbjct: 312 LNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKEKVLYRKTAGAPE 435
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.919e-31 Identity = 62/109 (56.88%), Postives = 85/109 (77.98%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 LNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +FQ+ T++M L+D+V L+D + D +S A+I AIC EAG+ A+R+ R + +DF+K Sbjct: 313 LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.919e-31 Identity = 62/109 (56.88%), Postives = 85/109 (77.98%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 LNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +FQ+ T++M L+D+V L+D + D +S A+I AIC EAG+ A+R+ R + +DF+K Sbjct: 313 LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.919e-31 Identity = 62/109 (56.88%), Postives = 85/109 (77.98%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 LNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +FQ+ T++M L+D+V L+D + D +S A+I AIC EAG+ A+R+ R + +DF+K Sbjct: 313 LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS4_ORYSJ (26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica GN=TBP2 PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.180e-30 Identity = 63/109 (57.80%), Postives = 86/109 (78.90%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 LNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +FQ+ T+KM L+D+V+LE++V D+ S A+I AIC EAG+ A+R+ R + DF+K Sbjct: 321 LNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKK 429
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.180e-30 Identity = 66/128 (51.56%), Postives = 94/128 (73.44%), Query Frame = -2 Query: 306 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNV---KKPDTDFEFY 680 LNQ+DGFD +VKV+MATNR ++LDPAL+RPGR+DRKIEFPLPD + KR +FQ+ T++M L EV+LE++++ D++S A+I A+C EAG+ A+R+ R + +DF+K + NV KK E Y Sbjct: 316 LNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKS-KENVLYRKKEGAPEELY 442 The following BLAST results are available for this feature:
BLAST of DN621544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621544 ID=DN621544; Name=DN621544; organism=Citrus sinensis; type=EST; length=681bpback to top |