DN621544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.542e-30 Identity = 63/109 (57.80%), Postives = 86/109 (78.90%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 LNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +FQ+ T+KM LS++V+LE++V D+ S A+I AIC EAG+ A+R+ R + DF+K Sbjct: 316 LNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKK 424
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.013e-30 Identity = 61/109 (55.96%), Postives = 85/109 (77.98%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 LNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +FQ+ T++M L+D+V L++ + D +S A+I AIC EAG+ A+R+ R + +DF+K Sbjct: 313 LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.485e-30 Identity = 62/109 (56.88%), Postives = 86/109 (78.90%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 LNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +FQ+ T+KM L+++V+LE++V D+ S A+I AIC EAG+ A+R+ R + DF+K Sbjct: 316 LNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKK 424
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.305e-29 Identity = 60/109 (55.05%), Postives = 84/109 (77.06%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 LNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +F + T++M L+++V+L + + D +S A+I AIC EAG+ A+R+ R + +DF+K Sbjct: 312 LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 420
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 5.132e-26 Identity = 57/109 (52.29%), Postives = 81/109 (74.31%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 LNQ+DGFD +VKVIMATN+ +TLDPAL+RPGR+DRKI F PD K+ + + T+KMNLS++V+LE V+ D +S A+I A+C EAG+ A+R+ R + +DF++ Sbjct: 310 LNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQ 418
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.143e-25 Identity = 58/117 (49.57%), Postives = 79/117 (67.52%), Query Frame = -2 Query: 330 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKK 680 LNQ+DGF+ N+KVIMATNR D LDPALLR GR+DRKIEFP P+ + + ++ + KMNL+ +DLE S+ S AE+ A+C EAGM+A+R+ R + +DFE +KK Sbjct: 324 LNQLDGFESHNNIKVIMATNRIDILDPALLRTGRIDRKIEFPPPNESARLEILKIHSRKMNLTKGIDLETIASKMVGCSGAEVKAVCTEAGMYALRERRVHVTQEDFEMAVHKVLKK 440
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.143e-25 Identity = 54/107 (50.47%), Postives = 78/107 (72.90%), Query Frame = -2 Query: 360 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDF 680 LNQ+DGFD ++KVIMATN+ + LDPAL+RPGR+DRKIEF +PD K+ +F + T++M L + V++E ++ + +S A+I AIC EAGM A+R+ R + KDF Sbjct: 297 LNQLDGFDTRNDIKVIMATNKIEALDPALIRPGRIDRKIEFGMPDAATKKKIFDIHTSRMTLDESVNIELLITSKEDLSGADIKAICTEAGMIALRERRKTVTMKDF 403
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.326e-25 Identity = 56/120 (46.67%), Postives = 78/120 (65.00%), Query Frame = -2 Query: 321 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDT 680 LNQ+DGF+ T N+KVIMATNR D LDPALLRPGR+DRKIEFP P + + ++ + MNL+ +DL+ + + S AE+ +C EAGM A+R+ R + +DFE + K D+ Sbjct: 274 LNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVLNKGDS 393
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS10_CAEEL (Probable 26S protease regulatory subunit S10B OS=Caenorhabditis elegans GN=rpt-4 PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.344e-25 Identity = 59/126 (46.83%), Postives = 81/126 (64.29%), Query Frame = -2 Query: 309 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRT--NVKKPDTDFEF 680 LNQ+DGFD VKVIMATNR DTLDPALLRPGRLDRKIE LP+ + + + ++ + K+ E+D E V D SAA++ +C EAGM A+R R ++ +DF K R + K+ +T ++ Sbjct: 278 LNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETKLDY 403
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.678e-25 Identity = 59/120 (49.17%), Postives = 81/120 (67.50%), Query Frame = -2 Query: 324 LNQMDGFDQTV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPD 680 LNQ+DGFD + ++KVIMATNR LDPAL+RPGR+DRKI F PD KR +F + T+KMNL ++V+LE+ + D +S AEI AI EAG+ A+R+ R ++ DF + +K D Sbjct: 319 LNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVLKTKD 438 The following BLAST results are available for this feature:
BLAST of DN621544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621544 ID=DN621544; Name=DN621544; organism=Citrus sinensis; type=EST; length=681bpback to top |