DN621544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: ATAD2_HUMAN (ATPase family AAA domain-containing protein 2 OS=Homo sapiens GN=ATAD2 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = -2 Query: 390 MDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSD-EVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 671 MDG D + VI ATNR D++DPAL RPGR DR+ F LPD+ ++ + ++ T N + LE+ A+I +IC EA + A+R+ Sbjct: 559 MDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYCGADIKSICAEAALCALRR 653
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 41/114 (35.96%), Postives = 62/114 (54.39%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSR-----PDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 L +MDGF+ + NV V+ TNR D LDPAL RPGR DR+I PD + + +F+V + L + +D +SR + A+I+ +C EA + A R + + FE+ Sbjct: 427 LVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLS-KDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQ 539
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: ATAD2_PONAB (ATPase family AAA domain-containing protein 2 OS=Pongo abelii GN=ATAD2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 37/95 (38.95%), Postives = 53/95 (55.79%), Query Frame = -2 Query: 390 MDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSD-EVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 671 MDG D + VI ATNR D +DPAL RPGR DR+ F LPD+ ++ + ++ T N + LE+ A+I +IC EA + A+R+ Sbjct: 390 MDGLDSRGEIVVIGATNRLDAIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYRGADIKSICAEAALCALRR 484
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: YME1_YEAST (Protein YME1 OS=Saccharomyces cerevisiae GN=YME1 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 38/108 (35.19%), Postives = 58/108 (53.70%), Query Frame = -2 Query: 357 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 680 L ++DGF QT + +I ATN + LD AL RPGR D+ + LPD R + + + K+ L+D VD +S AE+A + +A ++A +KN + FE Sbjct: 405 LVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFE 512
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: FTSHC_ARATH (Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 39/103 (37.86%), Postives = 57/103 (55.34%), Query Frame = -2 Query: 363 MDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKD 671 +D F V I ATNR D LD +R GR+DR++ LPD +Q+ +F V +A NL++++D V R S A+I + EA + +VRK R I +D Sbjct: 627 IDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKGRSYIYQQD 729 The following BLAST results are available for this feature:
BLAST of DN621544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621544 ID=DN621544; Name=DN621544; organism=Citrus sinensis; type=EST; length=681bpback to top |