DN621544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.193e-24 Identity = 56/121 (46.28%), Postives = 79/121 (65.29%), Query Frame = -2 Query: 318 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTD 680 LNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + + ++ + KMNL +DL+ + + S AE+ A+C EAGM A+R+ R + +DFE V K DT+ Sbjct: 290 LNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAV-AKVMKKDTE 409
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.193e-24 Identity = 53/107 (49.53%), Postives = 71/107 (66.36%), Query Frame = -2 Query: 360 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDF 680 +NQ+DGFD N+KV+MATNR DTLDPALLRPGRLDRK+EF LPD + +F++ T MN ++ E + A+I ++C EAGM+A+R R + KDF Sbjct: 296 VNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 402
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.193e-24 Identity = 53/107 (49.53%), Postives = 71/107 (66.36%), Query Frame = -2 Query: 360 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDF 680 +NQ+DGFD N+KV+MATNR DTLDPALLRPGRLDRK+EF LPD + +F++ T MN ++ E + A+I ++C EAGM+A+R R + KDF Sbjct: 296 VNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDF 402
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS10_DICDI (26S protease regulatory subunit S10B OS=Dictyostelium discoideum GN=psmC6 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.193e-24 Identity = 59/128 (46.09%), Postives = 77/128 (60.16%), Query Frame = -2 Query: 303 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR--TNVKKPDTDFEFYK 680 LNQMDGFD VK+IMATNR D LDPALLRPGRLDRKIE PLP+ + V ++ A + +VD E D +AA++ +C EAGM A+R R ++ +DF K R KK + ++ K Sbjct: 265 LNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDFMKAVRKCQEAKKLEGKLDYQK 392
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4) HSP 1 Score: 110.153 bits (274), Expect = 1.070e-23 Identity = 61/128 (47.66%), Postives = 76/128 (59.38%), Query Frame = -2 Query: 303 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR--TNVKKPDTDFEFYK 680 L QMDGFD K+IMATNR DTLDPALLRPGRLDRK+E PLP+ + +F++ TAK+ + E D E V D + A+I EAG A+R +R I P D K R VKK + E+ K Sbjct: 309 LTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKVAEVKKLEGTIEYQK 436
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PR6AB_XENLA (26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-B PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.397e-23 Identity = 54/125 (43.20%), Postives = 78/125 (62.40%), Query Frame = -2 Query: 306 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 680 LNQ+DGF T VKVI ATNR D LDPALLR GRLDRKIEFP+P+ + + Q+ + KMN+S +V+ E+ D + A+ A+C EAG+ A+R+ + +D+ +G K + ++Y Sbjct: 279 LNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDYMEGILEVQAKKKANLQYY 403
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.825e-23 Identity = 53/108 (49.07%), Postives = 73/108 (67.59%), Query Frame = -2 Query: 357 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 680 LNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + + ++ + KMNL+ ++L S AE+ +C EAGM+A+R+ R + +DFE Sbjct: 271 LNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 378
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.825e-23 Identity = 53/108 (49.07%), Postives = 73/108 (67.59%), Query Frame = -2 Query: 357 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 680 LNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + + ++ + KMNL+ ++L S AE+ +C EAGM+A+R+ R + +DFE Sbjct: 277 LNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.825e-23 Identity = 53/108 (49.07%), Postives = 73/108 (67.59%), Query Frame = -2 Query: 357 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 680 LNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + + ++ + KMNL+ ++L S AE+ +C EAGM+A+R+ R + +DFE Sbjct: 277 LNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.825e-23 Identity = 53/108 (49.07%), Postives = 73/108 (67.59%), Query Frame = -2 Query: 357 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 680 LNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + + ++ + KMNL+ ++L S AE+ +C EAGM+A+R+ R + +DFE Sbjct: 277 LNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384 The following BLAST results are available for this feature:
BLAST of DN621544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621544 ID=DN621544; Name=DN621544; organism=Citrus sinensis; type=EST; length=681bpback to top |