DN621544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.825e-23 Identity = 53/108 (49.07%), Postives = 73/108 (67.59%), Query Frame = -2 Query: 357 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 680 LNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + + ++ + KMNL+ ++L S AE+ +C EAGM+A+R+ R + +DFE Sbjct: 277 LNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.825e-23 Identity = 53/108 (49.07%), Postives = 73/108 (67.59%), Query Frame = -2 Query: 357 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 680 LNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + + ++ + KMNL+ ++L S AE+ +C EAGM+A+R+ R + +DFE Sbjct: 277 LNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 384
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6A_RAT (26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.825e-23 Identity = 54/125 (43.20%), Postives = 77/125 (61.60%), Query Frame = -2 Query: 306 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 680 LNQ+DGF VKVI ATNR D LDPALLR GRLDRKIEFP+P+ + + Q+ + KMN+S +V+ E+ D + A+ A+C EAGM A+R+ + +D+ +G K + ++Y Sbjct: 314 LNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYY 438
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.825e-23 Identity = 53/125 (42.40%), Postives = 77/125 (61.60%), Query Frame = -2 Query: 306 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 680 LNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP P + + Q+ + KMN++ +V+ E+ D + A++ A+C EAGM A+R++ + +DF +G K + +Y Sbjct: 304 LNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKKKSSLNYY 428
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6A_HUMAN (26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1 SV=3) HSP 1 Score: 109.383 bits (272), Expect = 1.825e-23 Identity = 54/125 (43.20%), Postives = 77/125 (61.60%), Query Frame = -2 Query: 306 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 680 LNQ+DGF VKVI ATNR D LDPALLR GRLDRKIEFP+P+ + + Q+ + KMN+S +V+ E+ D + A+ A+C EAGM A+R+ + +D+ +G K + ++Y Sbjct: 314 LNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYY 438
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.113e-23 Identity = 54/112 (48.21%), Postives = 73/112 (65.18%), Query Frame = -2 Query: 345 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR 680 LNQ+DGFDQ VK+IMATNR D LDPALLRPGRLDRKIE PLP+ + + + ++ + + E+D E V + + A++ IC EAGM A+R R ++ +DF K R Sbjct: 267 LNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVR 378
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.066e-23 Identity = 54/116 (46.55%), Postives = 73/116 (62.93%), Query Frame = -2 Query: 333 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVK 680 +NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F++ M++ ++ E + AEI ++C EAGM A+R R V KDF + +K Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIK 418
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.066e-23 Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = -2 Query: 306 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 680 LNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP P + + Q+ + KMN++ +V+ E+ D + A++ A+C EAGM A+R++ + +DF +G K +Y Sbjct: 298 LNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKKKASLNYY 422
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.310e-23 Identity = 54/112 (48.21%), Postives = 72/112 (64.29%), Query Frame = -2 Query: 345 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR 680 LNQ+DGFD VK+IMATNR D LDPALLRPGRLDRKIE PLP+ + + + ++ A + E+D E V + + A++ IC EAGM A+R R ++ +DF K R Sbjct: 267 LNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVR 378
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 5.310e-23 Identity = 53/116 (45.69%), Postives = 73/116 (62.93%), Query Frame = -2 Query: 333 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVK 680 +NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F++ M++ ++ E + AEI ++C EAGM A+R R + KDF + +K Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418 The following BLAST results are available for this feature:
BLAST of DN621544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621544 ID=DN621544; Name=DN621544; organism=Citrus sinensis; type=EST; length=681bpback to top |