DN621544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5) HSP 1 Score: 107.842 bits (268), Expect = 5.310e-23 Identity = 53/116 (45.69%), Postives = 73/116 (62.93%), Query Frame = -2 Query: 333 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVK 680 +NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F++ M++ ++ E + AEI ++C EAGM A+R R + KDF + +K Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 5.310e-23 Identity = 53/116 (45.69%), Postives = 73/116 (62.93%), Query Frame = -2 Query: 333 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVK 680 +NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F++ M++ ++ E + AEI ++C EAGM A+R R + KDF + +K Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 5.310e-23 Identity = 53/116 (45.69%), Postives = 73/116 (62.93%), Query Frame = -2 Query: 333 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVK 680 +NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F++ M++ ++ E + AEI ++C EAGM A+R R + KDF + +K Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 5.310e-23 Identity = 53/116 (45.69%), Postives = 73/116 (62.93%), Query Frame = -2 Query: 333 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVK 680 +NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F++ M++ ++ E + AEI ++C EAGM A+R R + KDF + +K Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.936e-23 Identity = 54/117 (46.15%), Postives = 76/117 (64.96%), Query Frame = -2 Query: 330 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKK 680 L +MDGFD +VK+I ATNR D LDPA+LRPGR DR IE P PD + + + ++ T KMNL+++V+LE+ + AE+ AIC EAGM+A+R+ R + DF K ++K Sbjct: 298 LAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEK 414
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.936e-23 Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = -2 Query: 306 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 680 LNQ+DGF VKVI ATNR D LDPALLR GRLDRKIEFP+P+ + + Q+ + KMN+S +V+ E+ D + A+ A+C EAGM A+R+ + +D +G K + ++Y Sbjct: 317 LNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHEDHMEGILEVQAKKKANLQYY 441
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.058e-23 Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = -2 Query: 306 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 680 LNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP P + + Q+ + KMN+ +V+ E+ D + A++ A+C EAGM A+R++ + +DF +G K +Y Sbjct: 299 LNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 423
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.058e-23 Identity = 52/110 (47.27%), Postives = 72/110 (65.45%), Query Frame = -2 Query: 351 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKG 680 LNQ+DGF + VK+I ATNR D LDPALLR GRLDRKIEFPLP+ ++ + Q+ KM++ D+V+ ++ + + A+ A+C EAGM A+RK + I DF G Sbjct: 276 LNQLDGFSSSEEVKIIAATNRVDILDPALLRSGRLDRKIEFPLPNTLGRKRILQIHARKMSVRDDVNFDELARSTEGFNGAQCKAVCVEAGMAALRKEKTEISQNDFMDG 385
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.058e-23 Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = -2 Query: 306 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 680 LNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP P + + Q+ + KMN+ +V+ E+ D + A++ A+C EAGM A+R++ + +DF +G K +Y Sbjct: 299 LNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 423
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 106.686 bits (265), Expect = 1.183e-22 Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = -2 Query: 306 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 680 LNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP P + + Q+ + KMN++ +V+ E+ D + A++ A+C EAGM A+R++ + +DF +G K +Y Sbjct: 298 LNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 422 The following BLAST results are available for this feature:
BLAST of DN621544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621544 ID=DN621544; Name=DN621544; organism=Citrus sinensis; type=EST; length=681bpback to top |