DN621544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.545e-22 Identity = 52/107 (48.60%), Postives = 70/107 (65.42%), Query Frame = -2 Query: 360 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDF 680 +NQ+DGFD N+KV+MATNR DTLDPALLRPGRLDRK+EF LPD + +F + M+ + ++ E + A+I ++C EAGM A+R R V+ KDF Sbjct: 298 INQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDF 404
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.018e-22 Identity = 52/107 (48.60%), Postives = 70/107 (65.42%), Query Frame = -2 Query: 360 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDF 680 L +MDGFD NV+++ ATNR D LDPALLRPGR DR I+ P+P + + ++ KMNL+D+VDL D+ S A+++AI EAGM A+R NR V+ DF Sbjct: 287 LAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRDVVDSSDF 393
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 2.635e-22 Identity = 52/116 (44.83%), Postives = 72/116 (62.07%), Query Frame = -2 Query: 333 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVK 680 +NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + + ++ M++ ++ E + AEI ++C EAGM A+R R + KDF + +K Sbjct: 303 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.495e-22 Identity = 55/117 (47.01%), Postives = 74/117 (63.25%), Query Frame = -2 Query: 330 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKK 680 L ++DGFD +VKVI ATNR D LDPA+LRPGR DR IE PLP + +F++ T KM L+++VD ++ + S A+I AIC EAGM A+R+ R + DF K +KK Sbjct: 269 LAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVLKK 385
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.871e-22 Identity = 52/116 (44.83%), Postives = 73/116 (62.93%), Query Frame = -2 Query: 333 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVK 680 +NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LPD + + ++ +M++ ++ + + AEI ++C EAGM A+R R V KDF + VK Sbjct: 305 INQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVK 420
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.871e-22 Identity = 52/112 (46.43%), Postives = 70/112 (62.50%), Query Frame = -2 Query: 345 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR 680 LNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI LP+ + + + ++ + E+D E V D + A++ +C EAGM A+R + ++ +DF K R Sbjct: 261 LNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFMKAVR 372
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22 Identity = 52/112 (46.43%), Postives = 70/112 (62.50%), Query Frame = -2 Query: 345 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR 680 LNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI LP+ + + + ++ + E+D E V D + A++ +C EAGM A+R + ++ +DF K R Sbjct: 261 LNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVR 372
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22 Identity = 52/112 (46.43%), Postives = 70/112 (62.50%), Query Frame = -2 Query: 345 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR 680 LNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI LP+ + + + ++ + E+D E V D + A++ +C EAGM A+R + ++ +DF K R Sbjct: 261 LNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVR 372
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22 Identity = 52/112 (46.43%), Postives = 70/112 (62.50%), Query Frame = -2 Query: 345 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR 680 LNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI LP+ + + + ++ + E+D E V D + A++ +C EAGM A+R + ++ +DF K R Sbjct: 261 LNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVR 372
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6A_YEAST (26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae GN=RPT5 PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 1.708e-21 Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = -2 Query: 306 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 680 LNQ+DGF VKV+ ATNR D LDPALLR GRLDRKIEFPLP + + Q+ + KM D+++ ++ D+ + A++ A+ EAGM A+R + + +DF +G + FY Sbjct: 309 LNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKSKSVSFY 433 The following BLAST results are available for this feature:
BLAST of DN621544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621544 ID=DN621544; Name=DN621544; organism=Citrus sinensis; type=EST; length=681bpback to top |