DN621544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.806e-21 Identity = 58/109 (53.21%), Postives = 69/109 (63.30%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 L +MDGFD NVKVI ATNR D LDPALLRPGR DR IE PLPD R + + +V T KMNL + VDL + S A++ AI EAGM A+R R + +DF K Sbjct: 266 LAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVHTRKMNLRN-VDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQEDFLK 373
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.970e-21 Identity = 51/109 (46.79%), Postives = 70/109 (64.22%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 L +MDGFD +VK+I ATNR D LDPA+LRPGR DR IE PD + +F++ T KMN+ VDL + + + A+I A+C EAGM A+R+ R + KDF++ Sbjct: 276 LAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIAAPDEDGRLEIFKIHTDKMNIK-SVDLREIAKMAENMVGADIKAVCTEAGMFAIREGREYVTTKDFKE 383
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.970e-21 Identity = 48/121 (39.67%), Postives = 77/121 (63.64%), Query Frame = -2 Query: 318 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTD 680 L++MDGFD+ ++++I ATNR D LD A+LRPGR DR IE P P+ + + ++ +MN++D VD D + + S A++A++ EAGM A+R +R + +DF+ Y V + DT+ Sbjct: 280 LSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVPNPNPDARERILEIHAGEMNVADSVDFSDLAADTAEFSGAQLASLATEAGMFAIRDDRDEVHRQDFDDAYEKLVAEGDTE 400
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21 Identity = 53/128 (41.41%), Postives = 77/128 (60.16%), Query Frame = -2 Query: 303 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR--TNVKKPDTDFEFYK 680 LNQMDGFD K+IMATNR DTLDPALLRPGRLDRKIE PLP+ + + ++ K++ E+D E V D + A++ + EAG A++++R ++ D R ++KK + ++ K Sbjct: 260 LNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKKLEGTIDYQK 387
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20 Identity = 52/123 (42.28%), Postives = 76/123 (61.79%), Query Frame = -2 Query: 312 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFE 680 L +MDGF +V++I ATNR D LD ALLRPGR DR IE P PD + + + A MN+ +VD+ D +R D + A++ +IC EAGM A+R + ++ +DFE+ +++K DFE Sbjct: 281 LAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQ----SIEKFSNDFE 399
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20 Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 L +MDGFD +VK++ ATNR D LD ALLRPGR DR IE PLPD + + + ++ T MN+ ++V+L + + + A++ AIC EAGM A+R R + +DF K Sbjct: 281 LAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAVNSEDFMK 389
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20 Identity = 50/107 (46.73%), Postives = 68/107 (63.55%), Query Frame = -2 Query: 360 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDF 680 L Q+DGFD N+KV+MATNR D LDPALLRPGRLDRK+EF LPD + +F++ T M+ ++ E + A+I ++C EAGM+A+ R + KDF Sbjct: 333 LYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDF 439
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.446e-20 Identity = 51/107 (47.66%), Postives = 69/107 (64.49%), Query Frame = -2 Query: 360 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDF 680 L ++DGF+ NV ++ ATNR D LDPALLRPGR DR IE PLP+ +R + ++ T+ M L++EVD+E D S A++ AIC EAGM A+R R + DF Sbjct: 279 LAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADF 385
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.889e-20 Identity = 57/109 (52.29%), Postives = 67/109 (61.47%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 L +MDGFD NVKVI ATNR D LDPALLRPGR DR IE PLPD + + + +V T KMNL VDL + S A++ AI EAGM A+R R + DF K Sbjct: 266 LAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNLKG-VDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLK 373
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.889e-20 Identity = 57/123 (46.34%), Postives = 75/123 (60.98%), Query Frame = -2 Query: 312 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFE 680 L MDGF+ +VK+I ATNR D LD ALLRPGR DR IE PLPD + + +V T MNLS++VDL + + + AE+ AIC EAGM A+RK P+ ++ + T + K DFE Sbjct: 281 LAAMDGFEPRGDVKIIGATNRIDILDAALLRPGRFDRIIEIPLPDTEGRYSILKVHTRCMNLSEDVDLMEVARLTEGRNGAELNAICMEAGMFAIRKEH----PQVDQEDFLTALNKFRCDFE 399 The following BLAST results are available for this feature:
BLAST of DN621544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621544 ID=DN621544; Name=DN621544; organism=Citrus sinensis; type=EST; length=681bpback to top |