DN621544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.889e-20 Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = -2 Query: 351 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKG 680 LNQ+DGF VKVI ATNR DTLDPALLR GRLDRK+EFPLP+ + + ++ + KM + D+++ E+ D+ + A + ++C EAGM A+R+ I + F G Sbjct: 313 LNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDG 422
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.467e-20 Identity = 47/108 (43.52%), Postives = 72/108 (66.67%), Query Frame = -2 Query: 357 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 680 L++MDGFD+ ++++I ATNR D LD A+LRPGR DR IE P P+ + +F++ T MN++D VD + + +S A++ AIC EAGM A+R +R + +DF+ Sbjct: 277 LSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVDFGELAADTGDLSGADVKAICTEAGMFAIRDDRTEVRMQDFQ 384
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.222e-20 Identity = 53/109 (48.62%), Postives = 69/109 (63.30%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 L +MDGFD + NVK+I ATNR D LDPALLRPGR DR IE PLP+ + + + ++ T +MNL VDL + S A++ AI EAGM A+R R + +DF K Sbjct: 267 LAEMDGFDPSGNVKIIAATNRPDILDPALLRPGRFDRLIEVPLPNFKSRLEILKIHTKRMNLKG-VDLRIIAEMTEGASGADLKAITMEAGMFAIRDRREYVTQEDFLK 374
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.208e-20 Identity = 49/109 (44.95%), Postives = 69/109 (63.30%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 + Q+DGFD N+KV+ ATNR +TLDPALLRPGR+DRK+EF LPD + +F++ + M++ + E + AE+ ++C EAGM A+R R V KDF K Sbjct: 337 ITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLK 445
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.495e-20 Identity = 55/109 (50.46%), Postives = 67/109 (61.47%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 L +MDGFD NVKVI ATNR D LDPALLRPGR DR IE PLPD + + +V T +M L VDL + S A++ AI EAGM A+R+ R + +DF K Sbjct: 268 LAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLKG-VDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLK 375
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.495e-20 Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 L +MDGFD +VK+I ATNR D LDPA+LRPGR DR IE +PD + + ++ T KMNL + VDL + + + A++ A+C EAGM A+R+ R I DF++ Sbjct: 276 LAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLKN-VDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKE 383
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.177e-20 Identity = 55/109 (50.46%), Postives = 68/109 (62.39%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 L +MDGFD NVKVI ATNR D LDPALLRPGR DR IE PLPD + + +V T +M L + VDL + S A++ AI EAGM A+R+ R + +DF K Sbjct: 268 LAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLKN-VDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLK 375
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.224e-19 Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 L +MDGFD +VK+I ATNR D LDPA+LRPGR DR IE +PD + + ++ T KMNL VDL + + + A++ A+C EAGM A+R+ R I DF++ Sbjct: 276 LAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNLKG-VDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKE 383
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.599e-19 Identity = 55/109 (50.46%), Postives = 67/109 (61.47%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 L +MDGFD NVKVI ATNR D LDPALLRPGR DR IE PLPD + + +V T +M L VDL + S A++ AI EAGM A+R+ R + +DF K Sbjct: 265 LAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLRG-VDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLK 372
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.599e-19 Identity = 50/109 (45.87%), Postives = 68/109 (62.39%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 L +MDGFD +VK+I ATNR D LDPA+LRPGR DR IE +PD + + ++ T KMNL VDL + + + A++ A+C EAGM A+R+ R I DF + Sbjct: 276 LAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLKG-VDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFRE 383 The following BLAST results are available for this feature:
BLAST of DN621544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621544 ID=DN621544; Name=DN621544; organism=Citrus sinensis; type=EST; length=681bpback to top |