DN621540
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621540 vs. ExPASy Swiss-Prot
Match: IMP4_YARLI (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Yarrowia lipolytica GN=IMP4 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.648e-17 Identity = 55/167 (32.93%), Postives = 88/167 (52.69%), Query Frame = 2 Query: 98 PRTIENTREPDETVCRPDDDELFAGNDADEFSSILKQGCA-PKILITTCRFNSSRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 595 P+ + + E +T+ DE DE+S++ G PK+++TT R S+R F E+ + P S RG L ++ K + +IV+H +R P A+ + P GPTA+F L +VLR D+ + GN + P L+ +NF T LG RV ++++ LFP Sbjct: 43 PKDVADDEELRKTIAY---DESVQDEIDDEYSAM--SGITDPKVVVTTSRDPSTRLSQFAKEVKLLFPTSIRLNRGGTVLPSLVSACKTSASSDLIVLHEHRGVPTAMTVSHFPHGPTAYFSLHNVVLRHDLPDTGNMSEVHPHLIFDNFTTDLGKRVVQILKHLFP 204
BLAST of DN621540 vs. ExPASy Swiss-Prot
Match: IMP4_DEBHA (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Debaryomyces hansenii GN=IMP4 PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 8.518e-16 Identity = 48/138 (34.78%), Postives = 74/138 (53.62%), Query Frame = 2 Query: 182 DEFSSILKQGCAPKILITTCRFNSSRGPAFISELLSVIPNSHYYKRGTYDLKKIIEYAKKKDFTSIIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTGHIPELVLNNFATRLGHRVGRLIQSLFP 595 DE+S+ L PK+LITT R S + F E+ + PNS RG Y + ++ ++ + +I++H +R P +L I P GP+ F L + LR D+ GN + P LV NF + LG RV ++++ LFP Sbjct: 68 DEYSA-LSGISEPKVLITTSRNPSVKLLQFSKEIKLMFPNSIKLNRGNYVITDLVATCQRVQISDLIILHEHRGIPTSLTISHFPHGPSIIFTLHNVKLRHDLPEIGNSSESYPHLVFENFTSELGKRVVKIMKHLFP 204 The following BLAST results are available for this feature:
BLAST of DN621540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621540 ID=DN621540; Name=DN621540; organism=Citrus sinensis; type=EST; length=602bpback to top |