DN621537

Overview
NameDN621537
Unique NameDN621537
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_VIBVU (3-isopropylmalate dehydrogenase OS=Vibrio vulnificus GN=leuB PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.077e-42
Identity = 89/153 (58.17%), Postives = 116/153 (75.82%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTK-LVGCQEMGEEVLKSV 748
            +  +A +YPDVELSHMY+DNA MQLI++P QFD ++ +NIFGDI+SDE +MITGS+GMLPSASL ES  GL+EP  GSAPDIAG++ ANP+A ILSAA++L+Y LGEE AA+ IE AV   L  G  T D+  AG K  +   EMG+++ + +
Sbjct:  210 VEELAKDYPDVELSHMYIDNATMQLIKDPAQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNESKFGLYEPAGGSAPDIAGKNIANPVAQILSAALMLRYSLGEEAAAQDIENAVSQALAAGELTADL--AGDKPALSTAEMGDKIAQYI 360          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_VIBCH (3-isopropylmalate dehydrogenase OS=Vibrio cholerae GN=leuB PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.936e-42
Identity = 89/149 (59.73%), Postives = 114/149 (76.51%), Query Frame = -2
Query:  305 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTK-LVGCQEMGEEV 748
            ++ IA EYPDV LSHMY+DNA MQLI++P QFD ++ +NIFGDILSDE +MITGS+GMLPSAS+ ES  GL+EP  GSAPDIAG++ ANP+A ILSAA++L+Y LGEE AA+ IE AV   L  G  T D+  AG+K  +    MG+++
Sbjct:  210 VSEIAKEYPDVSLSHMYIDNATMQLIKDPAQFDVMLCSNIFGDILSDECAMITGSMGMLPSASMNESKFGLYEPAGGSAPDIAGKNIANPVAQILSAALMLRYSLGEEAAARDIENAVSQALAAGELTADL--AGSKPALSTSAMGDKI 356          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_CHLCH (3-isopropylmalate dehydrogenase OS=Chlorobium chlorochromatii (strain CaD3) GN=leuB PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.936e-42
Identity = 87/153 (56.86%), Postives = 112/153 (73.20%), Query Frame = -2
Query:  290 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSVE 748
            + A+ ++Y DVELS MYVDNAAMQ++RNPKQFD IVT N+FGDILSD + MITGS+GMLPSAS+G S   L+EPIHGSAPDIAGQ+KANP+ATI S AM+ ++       A+ IE+A+   L  G+RT DI +AG   V    M E ++  ++
Sbjct:  201 VHAVHADYQDVELSDMYVDNAAMQIVRNPKQFDVIVTGNLFGDILSDISGMITGSLGMLPSASIG-SKHALYEPIHGSAPDIAGQNKANPIATIASVAMMFEHSFKRTDIARDIEQAIEAALATGVRTADIAAAGDTAVSTTAMTEAIISQLK 352          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_DESPS (3-isopropylmalate dehydrogenase OS=Desulfotalea psychrophila GN=leuB PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.354e-41
Identity = 85/152 (55.92%), Postives = 112/152 (73.68%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  +A EYPDV+L+H+YVDNA MQL+R+P QFD ++  N+FGDI+SDEA+M+TGS+G+L SASL     GLFEP  GSAPDIAGQ  ANP+A ILSAAM+L+Y LG   AA  IE AV  TLD+G+ T DI    ++ V   EMG+ ++ ++
Sbjct:  206 VLEVAKEYPDVKLNHIYVDNATMQLVRDPHQFDVMLCGNMFGDIISDEAAMLTGSMGLLASASLNTENFGLFEPAGGSAPDIAGQGIANPIAEILSAAMMLRYSLGYGEAADAIEAAVEKTLDRGICTADIAVDRSQAVNTAEMGDAIVAAL 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_SALTI (3-isopropylmalate dehydrogenase OS=Salmonella typhi GN=leuB PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.768e-41
Identity = 84/152 (55.26%), Postives = 113/152 (74.34%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  +A  YPDVEL+HMY+DNA MQLI++P QFD ++ +N+FGDILSDE +MITGS+GMLPSASL E   GL+EP  GSAPDIAG++ ANP+A ILS A+LL+Y L  + AA  IE+A+   L++G+RT D+ + G   V   EMG+ + + V
Sbjct:  209 VNDVAKAYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQEFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADEAATAIEQAINRALEEGVRTSDL-ARGAAAVSTDEMGDIIARYV 359          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_SILPO (3-isopropylmalate dehydrogenase OS=Silicibacter pomeroyi GN=leuB PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.016e-41
Identity = 88/162 (54.32%), Postives = 112/162 (69.14%), Query Frame = -2
Query:  281 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGE-----SGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIY-SAGTKLVGCQEMGEEVLKSVETQV 748
            +T +A +YP+VELSHMY DN AMQL+R PKQFD I+T+N+FGDILSD A+M+TGS+GMLPSASLG          L+EP+HGSAPDIAGQ KANP+A ILS AM L+Y   +   A R+E AV   L  G+RT D+  + G   V   EMG  +L  ++  +
Sbjct:  206 VTRVAKDYPEVELSHMYADNGAMQLVRAPKQFDVILTDNLFGDILSDCAAMLTGSLGMLPSASLGAPMANGRPKALYEPVHGSAPDIAGQGKANPIACILSFAMALRYSFDQGAEADRLEAAVEQVLADGVRTADLLGTEGVTPVSTTEMGAAILAKLDASL 367          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_BACSU (3-isopropylmalate dehydrogenase OS=Bacillus subtilis GN=leuB PE=3 SV=3)

HSP 1 Score: 168.318 bits (425), Expect = 3.939e-41
Identity = 89/152 (58.55%), Postives = 108/152 (71.05%), Query Frame = -2
Query:  284 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSVETQ 739
            +A E+PDV+L HM VDNAAMQLI  P QFD +VT N+FGDILSDEASM+TGS+GMLPSASL  SG  LFEP+HGSAPDIAG+  ANP A ILSAAMLL+   G E  AK +E AV   L  G RT D+ +   +    Q + EEV  ++ ++
Sbjct:  209 VAQEFPDVKLEHMLVDNAAMQLIYAPNQFDVVVTENMFGDILSDEASMLTGSLGMLPSASLSSSGLHLFEPVHGSAPDIAGKGMANPFAAILSAAMLLRTSFGLEEEAKAVEDAVNKVLASGKRTRDL-ARSEEFSSTQAITEEVKAAIMSE 359          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_RHOBA (3-isopropylmalate dehydrogenase OS=Rhodopirellula baltica GN=leuB PE=3 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 5.144e-41
Identity = 85/147 (57.82%), Postives = 110/147 (74.83%), Query Frame = -2
Query:  302 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAG-TKLVGCQEMGEEVL 739
            +A+E+PDV+   + VD+ AM LI  P +FD +VT N+FGDIL+DEASM+ GS+GMLPSASLG+ GPGL+EPIHGSAPDIAG+  ANPLATIL+AAM+L++ LG    A+ IEKAV   +  GLRT D+     +K V  +EMG  V+
Sbjct:  208 MANEFPDVQYDVVLVDSMAMHLINRPSEFDVVVTGNMFGDILTDEASMLPGSLGMLPSASLGDGGPGLYEPIHGSAPDIAGKSVANPLATILAAAMMLRHSLGLTDEAEAIEKAVAGVITDGLRTPDLARGDQSKSVSTEEMGAAVV 354          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_OCEIH (3-isopropylmalate dehydrogenase OS=Oceanobacillus iheyensis GN=leuB PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.719e-41
Identity = 85/151 (56.29%), Postives = 112/151 (74.17%), Query Frame = -2
Query:  284 ASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSVETQ 736
            + +YPDV ++H+ VD AAM+L+  P  FD IVT N+FGDILSDEAS++TGS+GMLPSASL   G GL+EP+HGSAPDIAG+  ANPLA ILSAA++L++  G    AK IE+AV D L +G  T DI+  G   VG ++M + VL++V T+
Sbjct:  205 SKDYPDVAVNHLLVDAAAMKLVTQPSFFDVIVTENLFGDILSDEASVLTGSLGMLPSASLRADGLGLYEPVHGSAPDIAGKGIANPLAMILSAALMLEHSFGLVDEAKEIERAVNDCLLQGFHTADIHIPGGVQVGTKQMTDAVLENVTTK 355          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_BUCML (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Macrosiphoniella ludovicianae GN=leuB PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.775e-41
Identity = 79/148 (53.38%), Postives = 109/148 (73.65%), Query Frame = -2
Query:  305 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEV 748
            +T ++  YPDV LSH+Y+DNA MQ+I+NP QFD ++ +N+FGDILSDE ++ITGSIGMLPSASL E   GL+EP  GSAPDIAG++ ANP+A ILS +ML++YG+  +  A +I+++V+  L KG RT DI       +   EMG+ +
Sbjct:  210 VTKVSKNYPDVHLSHLYIDNATMQIIQNPNQFDILLCSNLFGDILSDECAIITGSIGMLPSASLNEKNFGLYEPAGGSAPDIAGKNIANPIAQILSLSMLVRYGMNLKKIANKIDQSVISVLKKGYRTFDISDDNNXFLKTNEMGDVI 357          
The following BLAST results are available for this feature:
BLAST of DN621537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
LEU3_VIBVU6.077e-4258.173-isopropylmalate dehydrogenase OS=Vibrio vulnific... [more]
LEU3_VIBCH7.936e-4259.733-isopropylmalate dehydrogenase OS=Vibrio cholerae... [more]
LEU3_CHLCH7.936e-4256.863-isopropylmalate dehydrogenase OS=Chlorobium chlo... [more]
LEU3_DESPS1.354e-4155.923-isopropylmalate dehydrogenase OS=Desulfotalea ps... [more]
LEU3_SALTI1.768e-4155.263-isopropylmalate dehydrogenase OS=Salmonella typh... [more]
LEU3_SILPO3.016e-4154.323-isopropylmalate dehydrogenase OS=Silicibacter po... [more]
LEU3_BACSU3.939e-4158.553-isopropylmalate dehydrogenase OS=Bacillus subtil... [more]
LEU3_RHOBA5.144e-4157.823-isopropylmalate dehydrogenase OS=Rhodopirellula ... [more]
LEU3_OCEIH6.719e-4156.293-isopropylmalate dehydrogenase OS=Oceanobacillus ... [more]
LEU3_BUCML8.775e-4153.383-isopropylmalate dehydrogenase OS=Buchnera aphidi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621537 ID=DN621537; Name=DN621537; organism=Citrus sinensis; type=EST; length=749bp
TCAATTTTAATTTGATTTTCTAATTTGCATCAACATTGAGACACCAGAGC
AAACTGTAAACAAAGTGCAAATTAAAAGACTTGCTTTTATTTTCCAAAAG
TTGTCACAATGATATTCCATGTTACAACAGCTCCAGATGAAGGCGGTTTC
AGAAAGACGGAAAAGATACAACACCAACTCAATATCTTATCAACCAAAAA
TCTACCACCCAAAAGATTACAAAGCCGTGATCCTATAGCATCCTTAGTGC
TGGTCCGATTTTAATTTAAACAGCAGCAGGAACTTGAGTCTCTACTGATT
TCAAAACCTCTTCGCCCATCTCCTGGCATCCTACTAATTTAGTCCCAGCA
GAGTATATGTCACCCGTTCGAAGCCCCTTATCTAGAGTATCTAAAACTGC
TTTCTCAATTCTCTTTGCAGCATGTTCCTCCCCTAAGCCATACTTCAAAA
GCATAGCAGCACTGAGTATAGTAGCCAATGGGTTTGCTTTATCCTGTCCA
GCAATATCGGGAGCAGAACCATGTATTGGTTCAAAGAGTCCAGGTCCCGA
TTCACCAAGACTGGCAGATGGGAGCATTCCTATACTTCCAGTAATCATTG
AAGCCTCATCAGATAAAATGTCACCAAATATGTTGTTTGTCACAATTGTA
TCAAACTGTTTTGGATTGCGAATAAGTTGCATTGCAGCGTTGTCGACATA
CATATGTGAGAGTTCAACATCAGGATACTCTGAGGCTATTGCCGTGATT
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