DN621537

Overview
NameDN621537
Unique NameDN621537
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_DESDG (3-isopropylmalate dehydrogenase OS=Desulfovibrio desulfuricans (strain G20) GN=leuB PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.652e-53
Identity = 104/144 (72.22%), Postives = 115/144 (79.86%), Query Frame = -2
Query:  305 ASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEV 736
            A E+PDVELSHMYVDNAAMQL+R+P QFD IVT N+FGDILSDEAS+ITGSIGMLPSASLG  GPGLFEPIHGSAPDIAGQ+KANPLATILS AM+L++  G E  A+ +E AV   L  G RTGDI   G  LVGC  MG  V
Sbjct:  211 ADEFPDVELSHMYVDNAAMQLVRDPSQFDVIVTGNLFGDILSDEASVITGSIGMLPSASLGAGGPGLFEPIHGSAPDIAGQNKANPLATILSTAMMLRHSFGLEKEAEAVEGAVQQVLKAGYRTGDIMDQGGTLVGCNTMGNLV 354          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_SYNS9 (3-isopropylmalate dehydrogenase OS=Synechococcus sp. (strain CC9902) GN=leuB PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.993e-53
Identity = 98/152 (64.47%), Postives = 125/152 (82.24%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            + A+A  Y +V++SHMYVDNAAMQL+R+P+QFD ++T N+FGDILSDEA+M+TGSIGMLPSASLG  GPGLFEP+HGSAPDIAGQDKANP+A +LSAAM+L+ GL +  AA  +E+AV   L  G RTGD+ S G   +GCQ MGE++LK++
Sbjct:  206 VDAMAPRYGEVDVSHMYVDNAAMQLVRDPRQFDVLLTGNLFGDILSDEAAMLTGSIGMLPSASLGSDGPGLFEPVHGSAPDIAGQDKANPMAMVLSAAMMLRIGLKQSSAADDLERAVDAVLASGFRTGDLMSEGCTPLGCQAMGEQLLKAL 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_NITEU (3-isopropylmalate dehydrogenase OS=Nitrosomonas europaea GN=leuB PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.226e-52
Identity = 103/155 (66.45%), Postives = 122/155 (78.71%), Query Frame = -2
Query:  284 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSVETQ 748
            +T  A  YPDV LSHM VDNAAMQL+RNP+QFD +VT N+FGDILSDEASM+TGSIGMLPSASL +   GL+EPIHGSAPDIAG+  ANPLATILSAAM+L+Y   +E AA RIE AV  TL +  RT DIY AG K VG  EMG+ VL +++++
Sbjct:  202 VTETAQSYPDVTLSHMLVDNAAMQLVRNPRQFDVVVTGNMFGDILSDEASMLTGSIGMLPSASLDDRNKGLYEPIHGSAPDIAGKGIANPLATILSAAMMLRYSFNQETAASRIEHAVQKTLQQSYRTEDIYEAGMKKVGTVEMGDRVLANLQSR 356          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_PSEF5 (3-isopropylmalate dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=leuB PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.960e-52
Identity = 102/152 (67.11%), Postives = 122/152 (80.26%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  +A +YPDVELSHMYVDNAAMQL+R PKQFD IVT+N+FGDILSDEASM+TGSIGMLPSASL  +  G++EP HGSAPDIAGQ  ANPLATILS +M+L+Y      AA  IE+AV   LD+GLRTGDI+SAG   VG QEMG+ V+ ++
Sbjct:  206 VEQVAKDYPDVELSHMYVDNAAMQLVRAPKQFDVIVTDNMFGDILSDEASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTEAADAIEQAVSRVLDQGLRTGDIWSAGCTKVGTQEMGDAVVAAL 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_HAHCH (3-isopropylmalate dehydrogenase OS=Hahella chejuensis (strain KCTC 2396) GN=leuB PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.960e-52
Identity = 103/147 (70.07%), Postives = 119/147 (80.95%), Query Frame = -2
Query:  299 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLK 739
            +A EYPDVELSHMYVDNAAMQL+R PKQFD IVT N+FGDILSDEA+M+TGSIGMLPSASL  +G G++EP HGSAPDIAGQ+ ANPLATILSAAM+L+Y L  E AA  IE+AV D LD+GLRT DI  +  + V  Q MGE V +
Sbjct:  209 LAKEYPDVELSHMYVDNAAMQLVRAPKQFDVIVTGNMFGDILSDEAAMLTGSIGMLPSASLNAAGKGMYEPCHGSAPDIAGQNMANPLATILSAAMMLRYSLAAEDAAAAIEQAVSDVLDQGLRTRDIAGSSGESVSTQAMGEAVAR 355          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_RHOFD (3-isopropylmalate dehydrogenase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=leuB PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.477e-52
Identity = 101/153 (66.01%), Postives = 123/153 (80.39%), Query Frame = -2
Query:  290 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSVE 748
            +T +  +YPDVEL HMYVDNAAMQL+R PK+FD +VT N+FGDILSDEA+M+TGSIGMLPSASL  S  GL+EP HGSAPDIAG+  ANPLATILSAAM+L++ L +E AA+RIE AV D L +GLRT DI+S GT  V   EMG  V+K+++
Sbjct:  204 LTEVGQQYPDVELDHMYVDNAAMQLVRAPKKFDVVVTGNLFGDILSDEAAMLTGSIGMLPSASLNASSQGLYEPSHGSAPDIAGKGVANPLATILSAAMMLRFSLNQEVAAQRIEAAVKDVLVQGLRTADIFSTGTTRVSTVEMGAAVVKALK 356          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_PSEPF (3-isopropylmalate dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1) GN=leuB PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.105e-51
Identity = 101/152 (66.45%), Postives = 121/152 (79.61%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  +A +YPDVELSHMYVDNAAMQL+R PKQFD IVT+N+FGDILSDEASM+TGSIGMLPSASL  +  G++EP HGSAPDIAG+  ANPLATILS +M+L+Y      AA  IEKAV   LD+GLRTGDI+S G   VG QEMG+ V+ ++
Sbjct:  206 VEQVAKDYPDVELSHMYVDNAAMQLVRAPKQFDVIVTDNMFGDILSDEASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGKGIANPLATILSVSMMLRYSFNLHEAADAIEKAVSVVLDQGLRTGDIFSTGCTKVGTQEMGDAVVAAL 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_BORPA (3-isopropylmalate dehydrogenase OS=Bordetella parapertussis GN=leuB PE=3 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.105e-51
Identity = 102/152 (67.11%), Postives = 120/152 (78.95%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  ++ +YPDVELSHMYVDNAAMQL+RNP+QFD IVT N+FGDILSDEA+M+TGSIGMLPSASL  +G GL+EP HGSAPDIAGQ  ANPLATILSAAMLL+Y L     A R+E AV   L  GLRT DI+ AGT  V   +MG+ VLK++
Sbjct:  206 VIEVSRDYPDVELSHMYVDNAAMQLVRNPRQFDVIVTGNLFGDILSDEAAMLTGSIGMLPSASLNAAGQGLYEPSHGSAPDIAGQGIANPLATILSAAMLLRYSLNLAPQADRVEAAVRKVLADGLRTADIHEAGTTKVSTSQMGDAVLKAL 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU32_BORBR (3-isopropylmalate dehydrogenase 2 OS=Bordetella bronchiseptica GN=leuB2 PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.105e-51
Identity = 102/152 (67.11%), Postives = 120/152 (78.95%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  ++ +YPDVELSHMYVDNAAMQL+RNP+QFD IVT N+FGDILSDEA+M+TGSIGMLPSASL  +G GL+EP HGSAPDIAGQ  ANPLATILSAAMLL+Y L     A R+E AV   L  GLRT DI+ AGT  V   +MG+ VLK++
Sbjct:  206 VIEVSRDYPDVELSHMYVDNAAMQLVRNPRQFDVIVTGNLFGDILSDEAAMLTGSIGMLPSASLNAAGQGLYEPSHGSAPDIAGQGIANPLATILSAAMLLRYSLNLAPQADRVEAAVRKVLADGLRTADIHEAGTTKVSTSQMGDAVLKAL 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_PSEAE (3-isopropylmalate dehydrogenase OS=Pseudomonas aeruginosa GN=leuB PE=3 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.443e-51
Identity = 99/153 (64.71%), Postives = 124/153 (81.05%), Query Frame = -2
Query:  290 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSVE 748
            +  +A +YPDVELSHMYVDNAAMQL+R PKQFD +VT+N+FGDILSDEASM+TGSIGMLPSASL  +  G++EP HGSAPDIAGQ  ANPLATILS +M+L+Y   +  AA  IE+AV   LD+GLRTGDI+S G + VG +EMG+ V+ +++
Sbjct:  206 VEEVAKDYPDVELSHMYVDNAAMQLVRAPKQFDVMVTDNMFGDILSDEASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFSQATAADAIEQAVSKVLDQGLRTGDIWSEGCRKVGTREMGDAVVAALK 358          
The following BLAST results are available for this feature:
BLAST of DN621537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
LEU3_DESDG7.652e-5372.223-isopropylmalate dehydrogenase OS=Desulfovibrio d... [more]
LEU3_SYNS99.993e-5364.473-isopropylmalate dehydrogenase OS=Synechococcus s... [more]
LEU3_NITEU2.226e-5266.453-isopropylmalate dehydrogenase OS=Nitrosomonas eu... [more]
LEU3_PSEF54.960e-5267.113-isopropylmalate dehydrogenase OS=Pseudomonas flu... [more]
LEU3_HAHCH4.960e-5270.073-isopropylmalate dehydrogenase OS=Hahella chejuen... [more]
LEU3_RHOFD6.477e-5266.013-isopropylmalate dehydrogenase OS=Rhodoferax ferr... [more]
LEU3_PSEPF1.105e-5166.453-isopropylmalate dehydrogenase OS=Pseudomonas flu... [more]
LEU3_BORPA1.105e-5167.113-isopropylmalate dehydrogenase OS=Bordetella para... [more]
LEU32_BORBR1.105e-5167.113-isopropylmalate dehydrogenase 2 OS=Bordetella br... [more]
LEU3_PSEAE1.443e-5164.713-isopropylmalate dehydrogenase OS=Pseudomonas aer... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621537 ID=DN621537; Name=DN621537; organism=Citrus sinensis; type=EST; length=749bp
TCAATTTTAATTTGATTTTCTAATTTGCATCAACATTGAGACACCAGAGC
AAACTGTAAACAAAGTGCAAATTAAAAGACTTGCTTTTATTTTCCAAAAG
TTGTCACAATGATATTCCATGTTACAACAGCTCCAGATGAAGGCGGTTTC
AGAAAGACGGAAAAGATACAACACCAACTCAATATCTTATCAACCAAAAA
TCTACCACCCAAAAGATTACAAAGCCGTGATCCTATAGCATCCTTAGTGC
TGGTCCGATTTTAATTTAAACAGCAGCAGGAACTTGAGTCTCTACTGATT
TCAAAACCTCTTCGCCCATCTCCTGGCATCCTACTAATTTAGTCCCAGCA
GAGTATATGTCACCCGTTCGAAGCCCCTTATCTAGAGTATCTAAAACTGC
TTTCTCAATTCTCTTTGCAGCATGTTCCTCCCCTAAGCCATACTTCAAAA
GCATAGCAGCACTGAGTATAGTAGCCAATGGGTTTGCTTTATCCTGTCCA
GCAATATCGGGAGCAGAACCATGTATTGGTTCAAAGAGTCCAGGTCCCGA
TTCACCAAGACTGGCAGATGGGAGCATTCCTATACTTCCAGTAATCATTG
AAGCCTCATCAGATAAAATGTCACCAAATATGTTGTTTGTCACAATTGTA
TCAAACTGTTTTGGATTGCGAATAAGTTGCATTGCAGCGTTGTCGACATA
CATATGTGAGAGTTCAACATCAGGATACTCTGAGGCTATTGCCGTGATT
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