DN621537

Overview
NameDN621537
Unique NameDN621537
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_NITOC (3-isopropylmalate dehydrogenase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=leuB PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.084e-50
Identity = 100/151 (66.23%), Postives = 122/151 (80.79%), Query Frame = -2
Query:  296 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKS 748
            ++ +A+E+P+VELSHMYVDNAAMQL+R PKQFD +VT N+FGDILSD A+M+TGSIGMLPSASL +SG G++EPIHGSAPDIAGQ  ANPLATILS AM+L+Y L     A R+EKAV   LD+GLRT DIYS GT  V    MG+ V+++
Sbjct:  206 MSEVAAEFPEVELSHMYVDNAAMQLVRAPKQFDVVVTTNMFGDILSDCAAMLTGSIGMLPSASLDQSGRGMYEPIHGSAPDIAGQGIANPLATILSVAMMLRYSLDSPAQATRLEKAVGAVLDQGLRTPDIYSPGTTQVSTGAMGDAVVEA 356          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU31_DECAR (3-isopropylmalate dehydrogenase 1 OS=Dechloromonas aromatica (strain RCB) GN=leuB1 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.084e-50
Identity = 100/149 (67.11%), Postives = 118/149 (79.19%), Query Frame = -2
Query:  293 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 739
            I+ +YPDVELSHM VDNAAMQL++ PKQFD +VT N+FGDILSDEASM+TGSIGMLPSASL +   GL+EP HGSAPDIAG+  ANPLATILSAAM+L+Y  G E  A R+E AV   L +G RTGDIY  GT  VG +EMG+ VL ++
Sbjct:  202 ISRDYPDVELSHMLVDNAAMQLVKAPKQFDVMVTGNMFGDILSDEASMLTGSIGMLPSASLDDKNKGLYEPSHGSAPDIAGKGVANPLATILSAAMMLRYTFGLEEQALRVENAVKKVLAQGYRTGDIYERGTNKVGTREMGDAVLAAL 350          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_RALEJ (3-isopropylmalate dehydrogenase OS=Ralstonia eutropha (strain JMP134) GN=leuB PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.721e-50
Identity = 100/149 (67.11%), Postives = 118/149 (79.19%), Query Frame = -2
Query:  293 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 739
            ++ EYPDVELSHMYVDNAAMQL++ PK FD IVT N+FGDILSDEA+M+TGSIGMLPSASL  +  GL+EP HGSAPDIAG+  ANPLATILSAAM+L+Y L +   A RIE AV   L +G RTGDI + G K VG +EMGE VL ++
Sbjct:  207 VSKEYPDVELSHMYVDNAAMQLVKAPKSFDVIVTGNMFGDILSDEAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGVANPLATILSAAMMLRYSLNKAEQADRIENAVKKVLAQGYRTGDILTPGCKQVGTREMGEAVLAAL 355          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_PSE14 (3-isopropylmalate dehydrogenase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=leuB PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.554e-50
Identity = 98/152 (64.47%), Postives = 121/152 (79.61%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  +A +YP+VELSHMYVDNAAMQL+R PKQFD IVT+N+FGDILSD+ASM+TGSIGMLPSASL  +  G++EP HGSAPDIAG+  ANPLATILS +M+L+Y      AA  IEKAV   LD+G+RTGDI+S G   VG QEMG+ V+ ++
Sbjct:  206 VEQVAKDYPEVELSHMYVDNAAMQLVRAPKQFDVIVTDNLFGDILSDQASMLTGSIGMLPSASLDTANKGMYEPCHGSAPDIAGKGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSVVLDQGIRTGDIWSEGKVKVGTQEMGDAVVAAL 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_CLOAB (3-isopropylmalate dehydrogenase OS=Clostridium acetobutylicum GN=leuB PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.642e-50
Identity = 98/149 (65.77%), Postives = 119/149 (79.87%), Query Frame = -2
Query:  302 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVL 748
            +T +A EYP+VEL+++YVDNAAMQL+R P QFD IVT+NIFGDIL+DEASM+TGSIGMLPSASL     G++EPIHGSAPDIAGQD ANPLA ILS AM+L+Y      AA+ +E AV   L+ G RTGDIY+ G+K VG +EMG+ VL
Sbjct:  206 VTEVAKEYPEVELNYLYVDNAAMQLVREPSQFDVIVTSNIFGDILTDEASMVTGSIGMLPSASLRNDTFGMYEPIHGSAPDIAGQDLANPLAQILSVAMMLEYSFNMTEAARDVEDAVEKVLNSGYRTGDIYTEGSKKVGTKEMGKLVL 354          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_PSEU2 (3-isopropylmalate dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=leuB PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.063e-50
Identity = 98/152 (64.47%), Postives = 121/152 (79.61%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  +A +YP+VELSHMYVDNAAMQL+R PKQFD IVT+N+FGDILSD+ASM+TGSIGMLPSASL  +  G++EP HGSAPDIAG+  ANPLATILS +M+L+Y      AA  IEKAV   LD+G+RTGDI+S G   VG QEMG+ V+ ++
Sbjct:  206 VEQVARDYPEVELSHMYVDNAAMQLVRAPKQFDVIVTDNLFGDILSDQASMLTGSIGMLPSASLDTANKGMYEPCHGSAPDIAGKGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGIRTGDIWSEGKVKVGTQEMGDAVVAAL 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_THICR (3-isopropylmalate dehydrogenase OS=Thiomicrospira crunogena (strain XCL-2) GN=leuB PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.918e-50
Identity = 98/152 (64.47%), Postives = 119/152 (78.29%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  +A EYP+VE+ HMYVDNAAMQL+ NPKQFD +VT N+FGDILSDEASM+TGSIGML SASL  +  G++EP HGSAPDIAGQ+ ANPLATILSAAM+L+Y L  E  A +IE AV   LD+GLRTGDI+S G   V   EMG+ V+ ++
Sbjct:  206 VDEVAKEYPEVEVQHMYVDNAAMQLVLNPKQFDVMVTGNMFGDILSDEASMLTGSIGMLASASLDANNKGMYEPSHGSAPDIAGQNIANPLATILSAAMMLRYSLNREDLALKIETAVSKVLDQGLRTGDIWSEGLTKVSTSEMGDAVVAAL 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_PSYCK (3-isopropylmalate dehydrogenase OS=Psychrobacter cryohalolentis (strain K5) GN=leuB PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.918e-50
Identity = 101/147 (68.71%), Postives = 118/147 (80.27%), Query Frame = -2
Query:  302 SEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIY---SAGTKLVGCQEMGEEVL 733
            SEY DV LSHMY DNA MQLI++PKQFD +VT N+FGDILSDEA+M+TGSIGMLPSASL E+G G++EP HGSAPDIAGQD ANPLATILS +M+L+Y   +E AA+ IE+AV D LD GLRT DI     AG   VGCQ+MG+ VL
Sbjct:  217 SEYSDVALSHMYADNACMQLIKDPKQFDVMVTGNLFGDILSDEAAMLTGSIGMLPSASLDEAGKGMYEPCHGSAPDIAGQDIANPLATILSVSMMLRYTFKQEAAAQAIEQAVSDVLDDGLRTVDILDRNEAGLIQVGCQQMGQAVL 363          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_PSYA2 (3-isopropylmalate dehydrogenase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=leuB PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.034e-49
Identity = 101/147 (68.71%), Postives = 118/147 (80.27%), Query Frame = -2
Query:  302 SEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIY---SAGTKLVGCQEMGEEVL 733
            +EY DV LSHMY DNA MQLI++PKQFD +VT N+FGDILSDEA+M+TGSIGMLPSASL E+G G++EP HGSAPDIAGQD ANPLATILS AM+L+Y   +E AA+ IE+AV D LD GLRT DI     AG   VGCQ+MG+ VL
Sbjct:  217 AEYSDVALSHMYADNACMQLIKDPKQFDVMVTGNLFGDILSDEAAMLTGSIGMLPSASLDEAGKGMYEPCHGSAPDIAGQDIANPLATILSVAMMLRYTFKQEVAAQAIEQAVSDVLDDGLRTVDILDRNEAGLIQVGCQQMGQAVL 363          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_AZOVI (3-isopropylmalate dehydrogenase OS=Azotobacter vinelandii GN=leuB PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.351e-49
Identity = 99/155 (63.87%), Postives = 121/155 (78.06%), Query Frame = -2
Query:  287 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGS-APDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSVET 748
            +  +A +YPDV LSHMYVDNAAMQL+R PKQFD IVT+N+FGDILSDEASM+TGSIGMLPSASL     G++EP HGS  PDIAG+  ANPLATILS +M+L+Y  G+  AA  IE+AV   LD+GLRTGDI+S G + VG  EMG+ V+ ++ T
Sbjct:  205 VEEVAKDYPDVVLSHMYVDNAAMQLVRAPKQFDVIVTDNMFGDILSDEASMLTGSIGMLPSASLDADNKGMYEPCHGSRRPDIAGKGIANPLATILSVSMMLRYSFGQVEAANAIEQAVSKVLDQGLRTGDIWSEGCRKVGTAEMGDAVVAALAT 359          
The following BLAST results are available for this feature:
BLAST of DN621537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
LEU3_NITOC2.084e-5066.233-isopropylmalate dehydrogenase OS=Nitrosococcus o... [more]
LEU31_DECAR2.084e-5067.113-isopropylmalate dehydrogenase 1 OS=Dechloromonas... [more]
LEU3_RALEJ2.721e-5067.113-isopropylmalate dehydrogenase OS=Ralstonia eutro... [more]
LEU3_PSE143.554e-5064.473-isopropylmalate dehydrogenase OS=Pseudomonas syr... [more]
LEU3_CLOAB4.642e-5065.773-isopropylmalate dehydrogenase OS=Clostridium ace... [more]
LEU3_PSEU26.063e-5064.473-isopropylmalate dehydrogenase OS=Pseudomonas syr... [more]
LEU3_THICR7.918e-5064.473-isopropylmalate dehydrogenase OS=Thiomicrospira ... [more]
LEU3_PSYCK7.918e-5068.713-isopropylmalate dehydrogenase OS=Psychrobacter c... [more]
LEU3_PSYA21.034e-4968.713-isopropylmalate dehydrogenase OS=Psychrobacter a... [more]
LEU3_AZOVI1.351e-4963.873-isopropylmalate dehydrogenase OS=Azotobacter vin... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621537 ID=DN621537; Name=DN621537; organism=Citrus sinensis; type=EST; length=749bp
TCAATTTTAATTTGATTTTCTAATTTGCATCAACATTGAGACACCAGAGC
AAACTGTAAACAAAGTGCAAATTAAAAGACTTGCTTTTATTTTCCAAAAG
TTGTCACAATGATATTCCATGTTACAACAGCTCCAGATGAAGGCGGTTTC
AGAAAGACGGAAAAGATACAACACCAACTCAATATCTTATCAACCAAAAA
TCTACCACCCAAAAGATTACAAAGCCGTGATCCTATAGCATCCTTAGTGC
TGGTCCGATTTTAATTTAAACAGCAGCAGGAACTTGAGTCTCTACTGATT
TCAAAACCTCTTCGCCCATCTCCTGGCATCCTACTAATTTAGTCCCAGCA
GAGTATATGTCACCCGTTCGAAGCCCCTTATCTAGAGTATCTAAAACTGC
TTTCTCAATTCTCTTTGCAGCATGTTCCTCCCCTAAGCCATACTTCAAAA
GCATAGCAGCACTGAGTATAGTAGCCAATGGGTTTGCTTTATCCTGTCCA
GCAATATCGGGAGCAGAACCATGTATTGGTTCAAAGAGTCCAGGTCCCGA
TTCACCAAGACTGGCAGATGGGAGCATTCCTATACTTCCAGTAATCATTG
AAGCCTCATCAGATAAAATGTCACCAAATATGTTGTTTGTCACAATTGTA
TCAAACTGTTTTGGATTGCGAATAAGTTGCATTGCAGCGTTGTCGACATA
CATATGTGAGAGTTCAACATCAGGATACTCTGAGGCTATTGCCGTGATT
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