DN621537

Overview
NameDN621537
Unique NameDN621537
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_RALME (3-isopropylmalate dehydrogenase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=leuB PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.764e-49
Identity = 99/149 (66.44%), Postives = 116/149 (77.85%), Query Frame = -2
Query:  293 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 739
            ++ EYPDVELSHMYVDNAAMQL++ PK FD IVT N+FGDILSDEA+M+TGSIGMLPSASL  +  GL+EP HGSAPDIAG+  ANPLATILSAAM+L+Y L     A RIE AV   L +G RT DI + G K VG +EMGE VL ++
Sbjct:  207 VSKEYPDVELSHMYVDNAAMQLVKAPKSFDVIVTGNMFGDILSDEAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGVANPLATILSAAMMLRYSLNRAEQADRIENAVKKVLAQGYRTADIVTPGCKQVGTREMGEAVLAAL 355          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_CHRSD (3-isopropylmalate dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=leuB PE=3 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.764e-49
Identity = 101/152 (66.45%), Postives = 116/152 (76.32%), Query Frame = -2
Query:  284 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSVETQ 739
            +A EYPDV LSHMYVDNAAMQL+R PKQFD IVT N+FGDILSD A+M+TGSIGMLPSASL E   G++EP HGSAPDIAGQ  ANPLATILS AM+L+Y L     A+RIE+AV   LD+GLRT DI   GT  V  Q MG+ VL + + Q
Sbjct:  208 LAPEYPDVALSHMYVDNAAMQLVRAPKQFDVIVTGNMFGDILSDAAAMLTGSIGMLPSASLNEQRQGMYEPCHGSAPDIAGQGIANPLATILSVAMMLRYSLEAPQLAERIERAVGTVLDQGLRTADIAFEGTAPVSTQAMGDAVLAAFQAQ 359          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_RALSO (3-isopropylmalate dehydrogenase OS=Ralstonia solanacearum GN=leuB PE=3 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.304e-49
Identity = 98/152 (64.47%), Postives = 119/152 (78.29%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +T +  EYP+VELSHMYVDNAAMQL++ PK FD +VT N+FGDILSDEA+M+TGSIGMLPSASL  +  GL+EP HGSAPDIAG+  ANPLATILSAAM+L+Y LG+   A RIE AV   L +G RTGDI + G K VG  EMG+ V+ ++
Sbjct:  205 VTDVHKEYPEVELSHMYVDNAAMQLVKAPKNFDVVVTGNMFGDILSDEAAMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGIANPLATILSAAMMLRYTLGKAEQADRIENAVKKVLAQGYRTGDILTPGCKQVGTVEMGDAVVAAL 356          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_DESVH (3-isopropylmalate dehydrogenase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=leuB PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.009e-49
Identity = 98/152 (64.47%), Postives = 114/152 (75.00%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  +A +YPDVELSHMYVDNAAMQL+R P QFD IVT N+FGDILSDEA++ITGSIGMLPSAS+G  GP LFEPIHGSAPDIAGQDKANP+ATILS  M+L+ G G    A  I+ AV   L +G RTGDI   G  LVG   MG  + + +
Sbjct:  206 VEEVARDYPDVELSHMYVDNAAMQLVRWPAQFDVIVTGNLFGDILSDEAAVITGSIGMLPSASMGSGGPALFEPIHGSAPDIAGQDKANPIATILSVGMMLRLGFGLAAEADAIDAAVRRVLAEGYRTGDIMENGRTLVGTVSMGNLIAERI 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_PSESM (3-isopropylmalate dehydrogenase OS=Pseudomonas syringae pv. tomato GN=leuB PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.930e-49
Identity = 96/152 (63.16%), Postives = 121/152 (79.61%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  +A +YP+VELSH+YVDNAAMQL+R PKQFD IVT+N+FGDILSD+ASM+TGSIGMLPSASL  +  G++EP HGSAPDIAGQ  ANPLATILS +M+L+Y      AA  IE+AV   LD+G+RTGDI+S G   VG +EMG+ V+ ++
Sbjct:  206 VEQVAKDYPEVELSHLYVDNAAMQLVRAPKQFDVIVTDNLFGDILSDQASMLTGSIGMLPSASLDTANKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTAAADAIEQAVSLVLDQGIRTGDIWSEGKVKVGTKEMGDAVVAAL 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_CLOPA (3-isopropylmalate dehydrogenase OS=Clostridium pasteurianum GN=leuB PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.930e-49
Identity = 98/150 (65.33%), Postives = 116/150 (77.33%), Query Frame = -2
Query:  299 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLK 748
            +  ++ EYP+VELSH+YVDN AMQL+R P QFD I+TNNIFGDILSDEASMITGSIGML S+S+ E   G++EPIHGSAPDIAG D ANPLA ILSAAML++Y L    AA+ +E AV   L++G RT DIY  GTK VG  EMG  VL+
Sbjct:  206 VNEVSKEYPEVELSHLYVDNTAMQLVRKPSQFDVILTNNIFGDILSDEASMITGSIGMLASSSIREDSFGMYEPIHGSAPDIAGLDIANPLAQILSAAMLMEYSLDMSEAARDVEAAVEKVLNEGYRTADIYIEGTKKVGTSEMGNLVLE 355          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_XANCP (3-isopropylmalate dehydrogenase OS=Xanthomonas campestris pv. campestris GN=leuB PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.132e-49
Identity = 97/152 (63.82%), Postives = 118/152 (77.63%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  +A +YPD+ LSHMYVDNAAMQL+R PKQFD IVT+N+FGDILSD+ASM+TGSIGMLPSASL  +  G++EP HGSAPDIAGQ  ANPLATILS AM+L+Y   +  AA  IE AV   LD+GLRT DI+S GT  VG   MG+ V+ ++
Sbjct:  206 VEEVAKDYPDIALSHMYVDNAAMQLVRAPKQFDVIVTDNMFGDILSDQASMLTGSIGMLPSASLDANSKGMYEPCHGSAPDIAGQGIANPLATILSVAMMLRYTFAQAAAADAIEAAVGKVLDQGLRTADIWSEGTTKVGTAAMGDAVVAAL 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_XANC8 (3-isopropylmalate dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=leuB PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.132e-49
Identity = 97/152 (63.82%), Postives = 118/152 (77.63%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  +A +YPD+ LSHMYVDNAAMQL+R PKQFD IVT+N+FGDILSD+ASM+TGSIGMLPSASL  +  G++EP HGSAPDIAGQ  ANPLATILS AM+L+Y   +  AA  IE AV   LD+GLRT DI+S GT  VG   MG+ V+ ++
Sbjct:  206 VEEVAKDYPDIALSHMYVDNAAMQLVRAPKQFDVIVTDNMFGDILSDQASMLTGSIGMLPSASLDANSKGMYEPCHGSAPDIAGQGIANPLATILSVAMMLRYTFAQAAAADAIEAAVGKVLDQGLRTADIWSEGTTKVGTAAMGDAVVAAL 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_BURM1 (3-isopropylmalate dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=leuB PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.132e-49
Identity = 99/149 (66.44%), Postives = 117/149 (78.52%), Query Frame = -2
Query:  293 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 739
            ++ EY DVELSHMYVDNAAMQL + PKQFD IVT N+FGDILSDEASM+TGSIGMLPSASL ++  GL+EP HGSAPDIAG+  ANPLATILSAAMLL+Y L     A RIE+AV   L++G RTGDI + G K VG   MG+ V+ ++
Sbjct:  207 VSKEYADVELSHMYVDNAAMQLAKAPKQFDVIVTGNMFGDILSDEASMLTGSIGMLPSASLDKNNKGLYEPSHGSAPDIAGKGIANPLATILSAAMLLRYSLNRAEQADRIERAVKTVLEQGYRTGDIATPGCKQVGTAAMGDAVVAAL 355          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_XANOR (3-isopropylmalate dehydrogenase OS=Xanthomonas oryzae pv. oryzae GN=leuB PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.703e-49
Identity = 96/152 (63.16%), Postives = 119/152 (78.29%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  +A +YPD+ LSHMYVDNAAMQL+R PKQFD IVT+N+FGDILSD+ASM+TGSIGMLPSASL  +  G++EP HGSAPDIAG+  ANPLATILS AM+L+Y   +  AA  IE+AV   LD+GLRT DI+S GT  VG   MG+ V+ ++
Sbjct:  206 VEEVAKDYPDIALSHMYVDNAAMQLVRAPKQFDVIVTDNMFGDILSDQASMLTGSIGMLPSASLDANSKGMYEPCHGSAPDIAGKGIANPLATILSVAMMLRYTFAQADAADAIERAVGKVLDQGLRTADIWSEGTTKVGTVAMGDAVVAAL 357          
The following BLAST results are available for this feature:
BLAST of DN621537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
LEU3_RALME1.764e-4966.443-isopropylmalate dehydrogenase OS=Ralstonia metal... [more]
LEU3_CHRSD1.764e-4966.453-isopropylmalate dehydrogenase OS=Chromohalobacte... [more]
LEU3_RALSO2.304e-4964.473-isopropylmalate dehydrogenase OS=Ralstonia solan... [more]
LEU3_DESVH3.009e-4964.473-isopropylmalate dehydrogenase OS=Desulfovibrio v... [more]
LEU3_PSESM3.930e-4963.163-isopropylmalate dehydrogenase OS=Pseudomonas syr... [more]
LEU3_CLOPA3.930e-4965.333-isopropylmalate dehydrogenase OS=Clostridium pas... [more]
LEU3_XANCP5.132e-4963.823-isopropylmalate dehydrogenase OS=Xanthomonas cam... [more]
LEU3_XANC85.132e-4963.823-isopropylmalate dehydrogenase OS=Xanthomonas cam... [more]
LEU3_BURM15.132e-4966.443-isopropylmalate dehydrogenase OS=Burkholderia mu... [more]
LEU3_XANOR6.703e-4963.163-isopropylmalate dehydrogenase OS=Xanthomonas ory... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621537 ID=DN621537; Name=DN621537; organism=Citrus sinensis; type=EST; length=749bp
TCAATTTTAATTTGATTTTCTAATTTGCATCAACATTGAGACACCAGAGC
AAACTGTAAACAAAGTGCAAATTAAAAGACTTGCTTTTATTTTCCAAAAG
TTGTCACAATGATATTCCATGTTACAACAGCTCCAGATGAAGGCGGTTTC
AGAAAGACGGAAAAGATACAACACCAACTCAATATCTTATCAACCAAAAA
TCTACCACCCAAAAGATTACAAAGCCGTGATCCTATAGCATCCTTAGTGC
TGGTCCGATTTTAATTTAAACAGCAGCAGGAACTTGAGTCTCTACTGATT
TCAAAACCTCTTCGCCCATCTCCTGGCATCCTACTAATTTAGTCCCAGCA
GAGTATATGTCACCCGTTCGAAGCCCCTTATCTAGAGTATCTAAAACTGC
TTTCTCAATTCTCTTTGCAGCATGTTCCTCCCCTAAGCCATACTTCAAAA
GCATAGCAGCACTGAGTATAGTAGCCAATGGGTTTGCTTTATCCTGTCCA
GCAATATCGGGAGCAGAACCATGTATTGGTTCAAAGAGTCCAGGTCCCGA
TTCACCAAGACTGGCAGATGGGAGCATTCCTATACTTCCAGTAATCATTG
AAGCCTCATCAGATAAAATGTCACCAAATATGTTGTTTGTCACAATTGTA
TCAAACTGTTTTGGATTGCGAATAAGTTGCATTGCAGCGTTGTCGACATA
CATATGTGAGAGTTCAACATCAGGATACTCTGAGGCTATTGCCGTGATT
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