DN621537

Overview
NameDN621537
Unique NameDN621537
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_CARHZ (3-isopropylmalate dehydrogenase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=leuB PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.950e-48
Identity = 100/149 (67.11%), Postives = 115/149 (77.18%), Query Frame = -2
Query:  293 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 739
            I  EYPDVELS+MYVDN AMQLIRNP+QFD IVT N+FGDIL+DE S++ GSIG+LPSASL     GL+EPIHGSAPDIAGQ+KANPLATILSA M+L+Y L     A  IEKAV   L KG RTGDI   GT LV C+EMG+ V + +
Sbjct:  216 IKKEYPDVELSYMYVDNCAMQLIRNPRQFDVIVTENMFGDILTDEGSVLAGSIGLLPSASLNGKF-GLYEPIHGSAPDIAGQNKANPLATILSAGMMLRYSLDCPEEALLIEKAVKAVLQKGYRTGDILEPGTTLVTCEEMGDLVAEEI 363          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_XANAC (3-isopropylmalate dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=leuB PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.327e-48
Identity = 96/152 (63.16%), Postives = 117/152 (76.97%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  +A +YPD+ LSHMYVDNAAMQL+R PKQFD IVT+N+FGDILSD+ASM+TGSIGMLPSASL  +  G++EP HGSAPDIAG+  ANPLATILS AM+L+Y      AA  IE AV   LD+GLRT DI+S GT  VG   MG+ V+ ++
Sbjct:  206 VEEVAKDYPDIALSHMYVDNAAMQLVRAPKQFDVIVTDNMFGDILSDQASMLTGSIGMLPSASLDANSKGMYEPCHGSAPDIAGKGIANPLATILSVAMMLRYTFARATAADAIEHAVGKVLDQGLRTADIWSEGTTKVGTVAMGDAVVAAL 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_BURS3 (3-isopropylmalate dehydrogenase OS=Burkholderia sp. (strain 383) GN=leuB PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.327e-48
Identity = 97/149 (65.10%), Postives = 117/149 (78.52%), Query Frame = -2
Query:  293 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 739
            ++ EY DVELSHMYVDNAAMQL + PKQFD IVT N+FGDILSDEASM+TGSIGMLPSASL ++  GL+EP HGSAPDIAG+  ANPLATILSAAM+L+Y L     A RIE+AV   L++G RTGDI + G + VG   MG+ V+ ++
Sbjct:  207 VSKEYADVELSHMYVDNAAMQLAKAPKQFDVIVTGNMFGDILSDEASMLTGSIGMLPSASLDKNNKGLYEPSHGSAPDIAGKGIANPLATILSAAMMLRYSLNRAEQADRIERAVKTVLEQGYRTGDIATPGGQQVGTTAMGDAVVAAL 355          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_DESHY (3-isopropylmalate dehydrogenase OS=Desulfitobacterium hafniense (strain Y51) GN=leuB PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.651e-47
Identity = 97/149 (65.10%), Postives = 119/149 (79.87%), Query Frame = -2
Query:  293 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 739
            +A EYP+VEL+HMYVDNAAMQL+RNPKQFD IVT N+FGDIL+D ASM+ GSIGML SASL  +  G++EP HGSAPDIAG++ ANPLATILSAA++L+Y  G E  A RIE AV   L++G RTGD+  AG K+VG  EMG+ VL ++
Sbjct:  205 LAKEYPEVELTHMYVDNAAMQLVRNPKQFDVIVTENMFGDILTDLASMLGGSIGMLSSASLSGT-QGMYEPAHGSAPDIAGKNLANPLATILSAALMLRYSFGMEAEALRIESAVEKVLEQGYRTGDLAQAGDKVVGTIEMGDAVLAAL 352          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_GEOKA (3-isopropylmalate dehydrogenase OS=Geobacillus kaustophilus GN=leuB PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.156e-47
Identity = 93/149 (62.42%), Postives = 115/149 (77.18%), Query Frame = -2
Query:  293 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 739
            +A ++PDV L HM VDNAAMQLIR PKQFD IVT N+FGDILSDEASM++GS+GMLPSASL  SGP L+EP+HGSAPDIAG +KANP+A ILSAAM+L+   G    A+ +E AV   LD+GLRT D+  +G ++V   EM EE+  +V
Sbjct:  209 VAKQFPDVTLEHMLVDNAAMQLIRAPKQFDVIVTENMFGDILSDEASMLSGSLGMLPSASLSASGPSLYEPVHGSAPDIAGMNKANPIAAILSAAMMLRLSFGLTAEAEAVEHAVRQALDQGLRTADLAPSGGRIVSTNEMVEEIKTAV 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_WOLSU (3-isopropylmalate dehydrogenase OS=Wolinella succinogenes GN=leuB PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.274e-47
Identity = 96/146 (65.75%), Postives = 117/146 (80.14%), Query Frame = -2
Query:  314 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTK-LVGCQEMG 748
            +T IA EYP+VELSHMY+DNAAMQLIRNPKQFD I+T N+FGDILSDEASM++GSIG+LPSAS+G     L+EPIHGSAPDIAGQ  ANP+ATI SA+M+L++ LGE  AA  I+KA++ TL +G RT DI + G K +    EMG
Sbjct:  202 VTRIAKEYPEVELSHMYIDNAAMQLIRNPKQFDVILTGNLFGDILSDEASMLSGSIGLLPSASIGGKA-ALYEPIHGSAPDIAGQGIANPIATIASASMMLRHSLGEVEAADAIDKAIVKTLKEGYRTKDIAAFGAKEICTTDEMG 346          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_PROMT (3-isopropylmalate dehydrogenase OS=Prochlorococcus marinus (strain NATL2A) GN=leuB PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.398e-46
Identity = 91/144 (63.19%), Postives = 114/144 (79.17%), Query Frame = -2
Query:  311 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYS-AGTKLVGCQEMGE 739
            ++++Y D+EL+H YVDNAAMQL+RNP QFD I+T N+FGDILSD A+M+TGSIGMLPSASL   GPG+FEP+HGSAPDIAG+D ANP+A +LSAAM+LK  L E  AA  +E A+ + L+ G RT D+ S   TK VGC +MGE
Sbjct:  209 VSNKYKDIELTHQYVDNAAMQLVRNPSQFDVILTGNLFGDILSDIAAMLTGSIGMLPSASLTTDGPGVFEPVHGSAPDIAGKDIANPIAMLLSAAMMLKIALNETEAATFLENAINEILNDGYRTSDLMSIQTTKQVGCSQMGE 352          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_PROMA (3-isopropylmalate dehydrogenase OS=Prochlorococcus marinus GN=leuB PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.398e-46
Identity = 91/148 (61.49%), Postives = 120/148 (81.08%), Query Frame = -2
Query:  293 EYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIY--SAGTKLVGCQEMGEEVLKSV 730
            +YP++EL+H YVDNAAMQL+R P QFD I+T+N+FGDI+SDEA+M+TGSIGMLPSASLGE GPG+FEP+HGSAPDIA ++ ANP+A ILS AM+L+ GL E  AA  +E A+   L KG RT D+    + TKL GC+EMG++++K++
Sbjct:  213 QYPNIELTHQYVDNAAMQLVREPAQFDVILTSNLFGDIISDEAAMLTGSIGMLPSASLGEDGPGVFEPVHGSAPDIAHKNLANPIAMILSTAMMLRTGLMEYKAATDLENAIDKVLGKGFRTIDLNRDQSNTKL-GCREMGDQIIKAI 359          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_ZYMMO (3-isopropylmalate dehydrogenase OS=Zymomonas mobilis GN=leuB PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.384e-46
Identity = 100/152 (65.79%), Postives = 112/152 (73.68%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  IA EYPDVELSHMYVDNAAMQL+R P QFD IVT N+FGDILSD AS   GSIG+LPSASL   G GL+EPIHGSAPDIAG  KANPLATILS AM+L+Y L  E  A RIEKAV   L+KG RT D+   G K+    EMG  VL ++
Sbjct:  201 VLEIAQEYPDVELSHMYVDNAAMQLVRAPDQFDVIVTGNLFGDILSDLASACVGSIGLLPSASLNSEGKGLYEPIHGSAPDIAGLGKANPLATILSGAMMLRYSLKREADADRIEKAVSTALEKGARTADL---GGKMT-TSEMGNAVLAAL 348          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_MOOTA (3-isopropylmalate dehydrogenase OS=Moorella thermoacetica (strain ATCC 39073) GN=leuB PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.067e-46
Identity = 96/150 (64.00%), Postives = 112/150 (74.67%), Query Frame = -2
Query:  290 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSVE 739
            I  E+P+V + HMYVDN AMQL+R P QFD IVT N FGDILSD+AS++TGSIGMLPSAS+G     L+EP HGSAPDIAGQ KANPLATILSAAM+LKY    + AA  IE AV   L KG RT D+Y  GT+LVG  EMG+ V + +E
Sbjct:  207 IKGEFPEVTVEHMYVDNCAMQLVRRPAQFDVIVTENTFGDILSDQASVLTGSIGMLPSASIG-GAVALYEPCHGSAPDIAGQQKANPLATILSAAMMLKYSFKMDQAAAAIEAAVGRVLAKGYRTPDLYVPGTQLVGTAEMGQLVRRELE 355          
The following BLAST results are available for this feature:
BLAST of DN621537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
LEU3_CARHZ1.950e-4867.113-isopropylmalate dehydrogenase OS=Carboxydothermu... [more]
LEU3_XANAC3.327e-4863.163-isopropylmalate dehydrogenase OS=Xanthomonas axo... [more]
LEU3_BURS33.327e-4865.103-isopropylmalate dehydrogenase OS=Burkholderia sp... [more]
LEU3_DESHY1.651e-4765.103-isopropylmalate dehydrogenase OS=Desulfitobacter... [more]
LEU3_GEOKA2.156e-4762.423-isopropylmalate dehydrogenase OS=Geobacillus kau... [more]
LEU3_WOLSU6.274e-4765.753-isopropylmalate dehydrogenase OS=Wolinella succi... [more]
LEU3_PROMT1.398e-4663.193-isopropylmalate dehydrogenase OS=Prochlorococcus... [more]
LEU3_PROMA1.398e-4661.493-isopropylmalate dehydrogenase OS=Prochlorococcus... [more]
LEU3_ZYMMO2.384e-4665.793-isopropylmalate dehydrogenase OS=Zymomonas mobil... [more]
LEU3_MOOTA4.067e-4664.003-isopropylmalate dehydrogenase OS=Moorella thermo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621537 ID=DN621537; Name=DN621537; organism=Citrus sinensis; type=EST; length=749bp
TCAATTTTAATTTGATTTTCTAATTTGCATCAACATTGAGACACCAGAGC
AAACTGTAAACAAAGTGCAAATTAAAAGACTTGCTTTTATTTTCCAAAAG
TTGTCACAATGATATTCCATGTTACAACAGCTCCAGATGAAGGCGGTTTC
AGAAAGACGGAAAAGATACAACACCAACTCAATATCTTATCAACCAAAAA
TCTACCACCCAAAAGATTACAAAGCCGTGATCCTATAGCATCCTTAGTGC
TGGTCCGATTTTAATTTAAACAGCAGCAGGAACTTGAGTCTCTACTGATT
TCAAAACCTCTTCGCCCATCTCCTGGCATCCTACTAATTTAGTCCCAGCA
GAGTATATGTCACCCGTTCGAAGCCCCTTATCTAGAGTATCTAAAACTGC
TTTCTCAATTCTCTTTGCAGCATGTTCCTCCCCTAAGCCATACTTCAAAA
GCATAGCAGCACTGAGTATAGTAGCCAATGGGTTTGCTTTATCCTGTCCA
GCAATATCGGGAGCAGAACCATGTATTGGTTCAAAGAGTCCAGGTCCCGA
TTCACCAAGACTGGCAGATGGGAGCATTCCTATACTTCCAGTAATCATTG
AAGCCTCATCAGATAAAATGTCACCAAATATGTTGTTTGTCACAATTGTA
TCAAACTGTTTTGGATTGCGAATAAGTTGCATTGCAGCGTTGTCGACATA
CATATGTGAGAGTTCAACATCAGGATACTCTGAGGCTATTGCCGTGATT
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