DN621537

Overview
NameDN621537
Unique NameDN621537
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_GEOSL (3-isopropylmalate dehydrogenase OS=Geobacter sulfurreducens GN=leuB PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.067e-46
Identity = 95/154 (61.69%), Postives = 115/154 (74.68%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSA--GTKLVGCQEMGEEVLKSV 748
            +T IA EYPDVELSHMYVDNAAMQL+R PKQFD I+  N+FGDILSDEA+M+TGS+GMLPSASL E   G++EP  GSAPDIAGQ  ANP+A ILS  M+LK+  G   AA  I+ AV   LD+G RT DIY    G KLV  +EMG+ ++ ++
Sbjct:  209 VTGIAKEYPDVELSHMYVDNAAMQLVRWPKQFDVILCENMFGDILSDEAAMLTGSLGMLPSASLAEGTFGMYEPSGGSAPDIAGQGIANPIAQILSMGMMLKFSFGMVDAADAIDNAVATVLDQGFRTRDIYQQKDGEKLVNTKEMGDAIIAAL 362          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_BACHD (3-isopropylmalate dehydrogenase OS=Bacillus halodurans GN=leuB PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.183e-45
Identity = 91/153 (59.48%), Postives = 112/153 (73.20%), Query Frame = -2
Query:  281 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSVETQV 739
            +A E+P+V L HM VDNAAMQLIR PKQFD +VT N+FGDILSDEASM+TGS+GMLPSASL   GPGL+EPIHGSAPDIAG+  ANPLATI S AM+LKY  G    AK IE A+   L +G RT DI   G +    + + + V+++++  V
Sbjct:  208 VAQEFPEVTLEHMLVDNAAMQLIRRPKQFDVLVTENLFGDILSDEASMVTGSLGMLPSASLTSDGPGLYEPIHGSAPDIAGKGVANPLATIASCAMMLKYSFGLHEEAKTIEDAIEAVLKQGYRTADIAKPGEESSSTKAITDAVVEAIQASV 360          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_RHORT (3-isopropylmalate dehydrogenase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=leuB PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.636e-45
Identity = 90/154 (58.44%), Postives = 114/154 (74.03%), Query Frame = -2
Query:  302 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGP-----GLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVL 748
            +T + ++YP++ LSHMY DN AMQL+R PKQFD IVT+N+FGDILSD A+M+TGS+GMLPSASLG +        ++EP+HGSAPDIAGQDKANPLATILS +M+L+Y       A  ++ AV   L KGLRTGDI+  G  LVG   MG+ +L
Sbjct:  209 VTKLGADYPEIALSHMYADNCAMQLVRQPKQFDVIVTDNLFGDILSDCAAMLTGSLGMLPSASLGAADAAGNRRAMYEPVHGSAPDIAGQDKANPLATILSFSMMLRYSFDLAEEADLVDNAVRGVLAKGLRTGDIFQPGKTLVGTTGMGDALL 362          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_PROM9 (3-isopropylmalate dehydrogenase OS=Prochlorococcus marinus (strain MIT 9312) GN=leuB PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.636e-45
Identity = 84/143 (58.74%), Postives = 116/143 (81.12%), Query Frame = -2
Query:  293 DVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 721
            ++ LS+MYVDNAAMQL+R+P QFD I+T+N+FGDILSD A+M+TGSIGMLPSASL  +GPG+FEP+HGSAPDIAG++ ANP+A +LSA+M+LK GL EE AAK +E AV   L +G RT D+    ++++ C E+G++++  +
Sbjct:  215 NISLSNMYVDNAAMQLVRDPSQFDVILTSNLFGDILSDLAAMLTGSIGMLPSASLNNNGPGVFEPVHGSAPDIAGKNIANPIAMLLSASMMLKIGLNEEEAAKNLETAVDKVLAEGFRTADLADGSSEVLSCSEIGDKIIDEI 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_PROMP (3-isopropylmalate dehydrogenase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=leuB PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.443e-45
Identity = 87/152 (57.24%), Postives = 120/152 (78.95%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            ++ +AS+  D+ LS+MYVDNAAMQL+++P QFD I+T+N+FGDILSD A+MITGSIGMLPSASL  SGPG+FEP+HGSAPDIAG++ ANP+A  LS +M+LK GL E  AA  IE A+ + L KG RT D+ +   +++ C E+GE++++ +
Sbjct:  206 VSLVASKENDLALSNMYVDNAAMQLVKDPGQFDVILTSNLFGDILSDLAAMITGSIGMLPSASLSNSGPGVFEPVHGSAPDIAGKNIANPIAMALSTSMMLKIGLNEIEAADDIEIAIDNVLSKGYRTSDLDNGNCQVLSCSEIGEKIIQEI 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_GEOMG (3-isopropylmalate dehydrogenase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=leuB PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.496e-45
Identity = 93/151 (61.59%), Postives = 113/151 (74.83%), Query Frame = -2
Query:  302 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIY--SAGTKLVGCQEMGEEVL 748
            +T IA EYPDVELSHMYVDNAAMQL+R PKQFD I+  N+FGDILSDEA+M+TGS+GMLPSASL E   G++EP  GSAPDIAGQ  ANP+A ILS  M+L++  G   AA  I+ AV   LD+G RT DI+    G KLV  +EMG+ ++
Sbjct:  209 VTGIAKEYPDVELSHMYVDNAAMQLVRWPKQFDVILCENMFGDILSDEAAMLTGSLGMLPSASLAEGTFGMYEPSGGSAPDIAGQGIANPIAQILSMGMMLRFSFGMVDAADAIDNAVAKVLDQGCRTRDIFQEKPGEKLVNTKEMGDAII 359          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU32_DECAR (3-isopropylmalate dehydrogenase 2 OS=Dechloromonas aromatica (strain RCB) GN=leuB2 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.496e-45
Identity = 89/145 (61.38%), Postives = 105/145 (72.41%), Query Frame = -2
Query:  314 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMG 748
            +T +   +PDV L HM VDNAAMQL++NPKQFD ++T N+FGDILSDEA+M+TGSIGMLPSASL     G++EP HGSAPDIAGQ  ANPL  ILSAAM+ +Y LG    A  IE AV   L  G RT DI+ AG +LV   EMG
Sbjct:  203 VTKVGERFPDVTLDHMLVDNAAMQLVKNPKQFDVLLTGNMFGDILSDEAAMLTGSIGMLPSASLNVEDKGMYEPCHGSAPDIAGQGVANPLGMILSAAMMFRYSLGRPDMADAIESAVQTVLTNGARTRDIFQAGDRLVSTSEMG 347          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_ERWCT (3-isopropylmalate dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=leuB PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.872e-45
Identity = 90/152 (59.21%), Postives = 117/152 (76.97%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +T +A  YPDV+LSH+Y+DNA MQLI++P QFD ++ +N+FGDILSDE +MITGS+GMLPSASL E G GL+EP  GSAPDIAG+D ANP+A ILS A+LL+Y LG + AA+ IEKAV   L +G RT D+ SA +  +G  EMG+ + + V
Sbjct:  209 VTEVAKAYPDVKLSHLYIDNATMQLIKDPSQFDVMLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKDIANPIAQILSLALLLRYSLGADDAAEAIEKAVNTALAEGYRTADLASA-SNAIGTSEMGDVIARFV 359          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_BACSK (3-isopropylmalate dehydrogenase OS=Bacillus clausii (strain KSM-K16) GN=leuB PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.308e-44
Identity = 94/149 (63.09%), Postives = 111/149 (74.50%), Query Frame = -2
Query:  293 IASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 739
            +A EYPDV LSHM VDNAAMQLIR+P+QFD IVT N+FGDILSDEASMITGS+G+LPSAS+  S  GLFEP+HGSAPDIAG   ANPLATILSAAM+L+Y  G    AK IE AV   L +G+RT DI  A    V    +   V++++
Sbjct:  208 VAREYPDVTLSHMLVDNAAMQLIRDPRQFDVIVTENLFGDILSDEASMITGSLGLLPSASMNTSKVGLFEPVHGSAPDIAGTGAANPLATILSAAMMLQYSFGLADEAKAIEVAVDRVLAQGVRTKDIAKASENAVSTTAITNAVMEAL 356          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_THETN (3-isopropylmalate dehydrogenase OS=Thermoanaerobacter tengcongensis GN=leuB PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.709e-44
Identity = 90/153 (58.82%), Postives = 117/153 (76.47%), Query Frame = -2
Query:  290 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSVE 748
            +  +A  YP+VEL+HMYVDN AMQL++NP QFD I+TNN+FGDILSDEA+ I GSIG+LPSASL     GL+EPIHGSAPDIAG+  ANPLATILS AM+L+Y  GEE AA+ I KAV   L++G RT D+      ++  +EMG++V++ ++
Sbjct:  204 VEEVAKRYPEVELNHMYVDNCAMQLVKNPFQFDVILTNNMFGDILSDEAAQIVGSIGILPSASLRGDRVGLYEPIHGSAPDIAGKKIANPLATILSVAMMLQYSFGEEEAAQDIRKAVERALEEGFRTADLGKG--IVLSTEEMGDKVVEYIK 354          
The following BLAST results are available for this feature:
BLAST of DN621537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
LEU3_GEOSL4.067e-4661.693-isopropylmalate dehydrogenase OS=Geobacter sulfu... [more]
LEU3_BACHD1.183e-4559.483-isopropylmalate dehydrogenase OS=Bacillus halodu... [more]
LEU3_RHORT2.636e-4558.443-isopropylmalate dehydrogenase OS=Rhodospirillum ... [more]
LEU3_PROM92.636e-4558.743-isopropylmalate dehydrogenase OS=Prochlorococcus... [more]
LEU3_PROMP3.443e-4557.243-isopropylmalate dehydrogenase OS=Prochlorococcus... [more]
LEU3_GEOMG4.496e-4561.593-isopropylmalate dehydrogenase OS=Geobacter metal... [more]
LEU32_DECAR4.496e-4561.383-isopropylmalate dehydrogenase 2 OS=Dechloromonas... [more]
LEU3_ERWCT5.872e-4559.213-isopropylmalate dehydrogenase OS=Erwinia carotov... [more]
LEU3_BACSK1.308e-4463.093-isopropylmalate dehydrogenase OS=Bacillus clausi... [more]
LEU3_THETN1.709e-4458.823-isopropylmalate dehydrogenase OS=Thermoanaerobac... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621537 ID=DN621537; Name=DN621537; organism=Citrus sinensis; type=EST; length=749bp
TCAATTTTAATTTGATTTTCTAATTTGCATCAACATTGAGACACCAGAGC
AAACTGTAAACAAAGTGCAAATTAAAAGACTTGCTTTTATTTTCCAAAAG
TTGTCACAATGATATTCCATGTTACAACAGCTCCAGATGAAGGCGGTTTC
AGAAAGACGGAAAAGATACAACACCAACTCAATATCTTATCAACCAAAAA
TCTACCACCCAAAAGATTACAAAGCCGTGATCCTATAGCATCCTTAGTGC
TGGTCCGATTTTAATTTAAACAGCAGCAGGAACTTGAGTCTCTACTGATT
TCAAAACCTCTTCGCCCATCTCCTGGCATCCTACTAATTTAGTCCCAGCA
GAGTATATGTCACCCGTTCGAAGCCCCTTATCTAGAGTATCTAAAACTGC
TTTCTCAATTCTCTTTGCAGCATGTTCCTCCCCTAAGCCATACTTCAAAA
GCATAGCAGCACTGAGTATAGTAGCCAATGGGTTTGCTTTATCCTGTCCA
GCAATATCGGGAGCAGAACCATGTATTGGTTCAAAGAGTCCAGGTCCCGA
TTCACCAAGACTGGCAGATGGGAGCATTCCTATACTTCCAGTAATCATTG
AAGCCTCATCAGATAAAATGTCACCAAATATGTTGTTTGTCACAATTGTA
TCAAACTGTTTTGGATTGCGAATAAGTTGCATTGCAGCGTTGTCGACATA
CATATGTGAGAGTTCAACATCAGGATACTCTGAGGCTATTGCCGTGATT
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