DN621537

Overview
NameDN621537
Unique NameDN621537
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_AQUAE (3-isopropylmalate dehydrogenase OS=Aquifex aeolicus GN=leuB PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.709e-44
Identity = 88/146 (60.27%), Postives = 114/146 (78.08%), Query Frame = -2
Query:  290 YPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSVE 727
            YPDVEL H+Y+DN AMQL+R P  FD IVT NIFGDILSDEA ++ GS+GMLPSAS+G+    L+EP+HGSAPDIAG+  ANP+ATILSAAM+LKY    + A   IEKA+ +TL++G RT DIYS G   VG +E+ +++L+++E
Sbjct:  213 YPDVELEHLYIDNCAMQLVRRPTSFDVIVTGNIFGDILSDEAGVVVGSLGMLPSASIGDR-YALYEPVHGSAPDIAGKGIANPIATILSAAMMLKYSFNMDKAHDLIEKAIEETLNQGYRTPDIYSEGCIKVGTKEITDKILENLE 357          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_SHIFL (3-isopropylmalate dehydrogenase OS=Shigella flexneri GN=leuB PE=3 SV=3)

HSP 1 Score: 179.104 bits (453), Expect = 2.231e-44
Identity = 88/152 (57.89%), Postives = 117/152 (76.97%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  IA+EYPDVEL+HMY+DNA MQLI++P QFD ++ +N+FGDILSDE +MITGS+GMLPSASL E G GL+EP  GSAPDIAG++ ANP+A ILS A+LL+Y L  + AA  IE+A+   L++G+RTGD+ + G   V   EMG+ + + V
Sbjct:  209 VNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEGIRTGDL-ARGAAAVSTDEMGDIIARYV 359          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_ECOUT (3-isopropylmalate dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=leuB PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.231e-44
Identity = 88/152 (57.89%), Postives = 117/152 (76.97%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  IA+EYPDVEL+HMY+DNA MQLI++P QFD ++ +N+FGDILSDE +MITGS+GMLPSASL E G GL+EP  GSAPDIAG++ ANP+A ILS A+LL+Y L  + AA  IE+A+   L++G+RTGD+ + G   V   EMG+ + + V
Sbjct:  210 VNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEGIRTGDL-ARGAAAVSTDEMGDIIARYV 360          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_ECOL6 (3-isopropylmalate dehydrogenase OS=Escherichia coli O6 GN=leuB PE=3 SV=3)

HSP 1 Score: 179.104 bits (453), Expect = 2.231e-44
Identity = 88/152 (57.89%), Postives = 117/152 (76.97%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  IA+EYPDVEL+HMY+DNA MQLI++P QFD ++ +N+FGDILSDE +MITGS+GMLPSASL E G GL+EP  GSAPDIAG++ ANP+A ILS A+LL+Y L  + AA  IE+A+   L++G+RTGD+ + G   V   EMG+ + + V
Sbjct:  209 VNEIATEYPDVELTHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEGIRTGDL-ARGAAAVSTDEMGDIIARYV 359          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_ECO57 (3-isopropylmalate dehydrogenase OS=Escherichia coli O157:H7 GN=leuB PE=3 SV=3)

HSP 1 Score: 178.718 bits (452), Expect = 2.914e-44
Identity = 87/152 (57.24%), Postives = 117/152 (76.97%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  IA+EYPD+EL+HMY+DNA MQLI++P QFD ++ +N+FGDILSDE +MITGS+GMLPSASL E G GL+EP  GSAPDIAG++ ANP+A ILS A+LL+Y L  + AA  IE+A+   L++G+RTGD+ + G   V   EMG+ + + V
Sbjct:  209 VNEIATEYPDIELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAASAIERAINRALEEGIRTGDL-ARGAAAVSTDEMGDIIARYV 359          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_BACCO (3-isopropylmalate dehydrogenase OS=Bacillus coagulans GN=leuB PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.806e-44
Identity = 90/148 (60.81%), Postives = 111/148 (75.00%), Query Frame = -2
Query:  293 ASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 736
            A +YPDVELSHM VD+ +MQLI NP QFD IVT N+FGDILSDEAS+ITGS+GMLPSASL     G++EP+HGSAPDIAGQ KANPL T+LSAA++L+Y  G E  A  IEKAV D L  G  TGD+  A  K+V   E+ + +++ +
Sbjct:  208 AKKYPDVELSHMLVDSTSMQLIANPGQFDVIVTENMFGDILSDEASVITGSLGMLPSASLRSDRFGMYEPVHGSAPDIAGQGKANPLGTVLSAALMLRYSFGLEKEAAAIEKAVDDVLQDGYCTGDLQVANGKVVSTIELTDRLIEKL 355          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_SHISS (3-isopropylmalate dehydrogenase OS=Shigella sonnei (strain Ss046) GN=leuB PE=3 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 4.971e-44
Identity = 88/152 (57.89%), Postives = 117/152 (76.97%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  IA+EYPDVEL+HMY+DNA MQLI++P QFD ++ +N+FGDILSDE +MITGS+GMLPSASL E G GL+EP  GSAPDIAG++ ANP+A ILS A+LL+Y L  + AA  IE+A+   L++G+RTGD+ + G   V   EMG+ + + V
Sbjct:  209 VNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEGIRTGDL-ARGAAAVSTDEMGDIIARYV 359          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_PELCD (3-isopropylmalate dehydrogenase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=leuB PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.971e-44
Identity = 91/151 (60.26%), Postives = 116/151 (76.82%), Query Frame = -2
Query:  302 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIY--SAGTKLVGCQEMGEEVL 748
            +  ++++YPDV LSHMYVDNAAMQL++ PKQFD ++  N+FGDILSDEA+M+TGS+GMLPSASL E   G++EP  GSAPDIAG++ ANP+A ILSAAMLL+Y  G   AA  +EKAV + L  GLRTGDIY  + G +LV    MG+ V+
Sbjct:  209 VERVSADYPDVVLSHMYVDNAAMQLVKAPKQFDVLLCPNMFGDILSDEAAMLTGSLGMLPSASLAEGSFGMYEPAGGSAPDIAGKNIANPVAQILSAAMLLRYSCGLADAADAVEKAVENCLAAGLRTGDIYQDADGEQLVSTSAMGDAVV 359          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_ECOLI (3-isopropylmalate dehydrogenase OS=Escherichia coli (strain K12) GN=leuB PE=1 SV=3)

HSP 1 Score: 177.948 bits (450), Expect = 4.971e-44
Identity = 88/152 (57.89%), Postives = 117/152 (76.97%), Query Frame = -2
Query:  293 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLVGCQEMGEEVLKSV 748
            +  IA+EYPDVEL+HMY+DNA MQLI++P QFD ++ +N+FGDILSDE +MITGS+GMLPSASL E G GL+EP  GSAPDIAG++ ANP+A ILS A+LL+Y L  + AA  IE+A+   L++G+RTGD+ + G   V   EMG+ + + V
Sbjct:  209 VNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEGIRTGDL-ARGAAAVSTDEMGDIIARYV 359          
BLAST of DN621537 vs. ExPASy Swiss-Prot
Match: LEU3_SULDN (3-isopropylmalate dehydrogenase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=leuB PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.479e-44
Identity = 92/146 (63.01%), Postives = 115/146 (78.77%), Query Frame = -2
Query:  314 ITAIASEYPDVELSHMYVDNAAMQLIRNPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLGESGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEHAAKRIEKAVLDTLDKGLRTGDIYSAGTKLV-GCQEMG 748
            +  +A EYP+VEL+HMYVDNAAMQLIR+P+QFD ++T NIFGDILSDEASM++GSIG+LPSAS+G +  G++EPIHGSAPDIAGQ  ANP+ATILSA+M+L+Y LGE  AA +I+ AV   L +G RT D+     K V    EMG
Sbjct:  202 VIEVAKEYPEVELTHMYVDNAAMQLIRDPRQFDVMLTGNIFGDILSDEASMLSGSIGLLPSASVG-AKIGVYEPIHGSAPDIAGQGIANPIATILSASMMLRYALGEHGAADKIDAAVKRALKEGYRTKDLAQYDAKEVCSTSEMG 346          
The following BLAST results are available for this feature:
BLAST of DN621537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 372
Match NameE-valueIdentityDescription
LEU3_AQUAE1.709e-4460.273-isopropylmalate dehydrogenase OS=Aquifex aeolicu... [more]
LEU3_SHIFL2.231e-4457.893-isopropylmalate dehydrogenase OS=Shigella flexne... [more]
LEU3_ECOUT2.231e-4457.893-isopropylmalate dehydrogenase OS=Escherichia col... [more]
LEU3_ECOL62.231e-4457.893-isopropylmalate dehydrogenase OS=Escherichia col... [more]
LEU3_ECO572.914e-4457.243-isopropylmalate dehydrogenase OS=Escherichia col... [more]
LEU3_BACCO3.806e-4460.813-isopropylmalate dehydrogenase OS=Bacillus coagul... [more]
LEU3_SHISS4.971e-4457.893-isopropylmalate dehydrogenase OS=Shigella sonnei... [more]
LEU3_PELCD4.971e-4460.263-isopropylmalate dehydrogenase OS=Pelobacter carb... [more]
LEU3_ECOLI4.971e-4457.893-isopropylmalate dehydrogenase OS=Escherichia col... [more]
LEU3_SULDN8.479e-4463.013-isopropylmalate dehydrogenase OS=Sulfurimonas de... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621537 ID=DN621537; Name=DN621537; organism=Citrus sinensis; type=EST; length=749bp
TCAATTTTAATTTGATTTTCTAATTTGCATCAACATTGAGACACCAGAGC
AAACTGTAAACAAAGTGCAAATTAAAAGACTTGCTTTTATTTTCCAAAAG
TTGTCACAATGATATTCCATGTTACAACAGCTCCAGATGAAGGCGGTTTC
AGAAAGACGGAAAAGATACAACACCAACTCAATATCTTATCAACCAAAAA
TCTACCACCCAAAAGATTACAAAGCCGTGATCCTATAGCATCCTTAGTGC
TGGTCCGATTTTAATTTAAACAGCAGCAGGAACTTGAGTCTCTACTGATT
TCAAAACCTCTTCGCCCATCTCCTGGCATCCTACTAATTTAGTCCCAGCA
GAGTATATGTCACCCGTTCGAAGCCCCTTATCTAGAGTATCTAAAACTGC
TTTCTCAATTCTCTTTGCAGCATGTTCCTCCCCTAAGCCATACTTCAAAA
GCATAGCAGCACTGAGTATAGTAGCCAATGGGTTTGCTTTATCCTGTCCA
GCAATATCGGGAGCAGAACCATGTATTGGTTCAAAGAGTCCAGGTCCCGA
TTCACCAAGACTGGCAGATGGGAGCATTCCTATACTTCCAGTAATCATTG
AAGCCTCATCAGATAAAATGTCACCAAATATGTTGTTTGTCACAATTGTA
TCAAACTGTTTTGGATTGCGAATAAGTTGCATTGCAGCGTTGTCGACATA
CATATGTGAGAGTTCAACATCAGGATACTCTGAGGCTATTGCCGTGATT
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