DN621534

Overview
NameDN621534
Unique NameDN621534
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621534 vs. ExPASy Swiss-Prot
Match: ODPX_MOUSE (Pyruvate dehydrogenase protein X component, mitochondrial OS=Mus musculus GN=Pdhx PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.180e-12
Identity = 30/50 (60.00%), Postives = 41/50 (82.00%), Query Frame = 3
Query:  528 MPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 677
            MPSLSPTM++GNI +WL+KEG+ VS G+ LCE+ETDKA V ++  ++G L
Sbjct:   61 MPSLSPTMEQGNIVKWLRKEGEAVSAGDSLCEIETDKAVVTLDANDDGIL 110          
BLAST of DN621534 vs. ExPASy Swiss-Prot
Match: ODP2_DICDI (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Dictyostelium discoideum GN=pdhC PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11
Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 3
Query:  462 SKVQLKRGFSSDSGLPPHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECME-EGYL 677
            S++  KR +SS       +EI MP+LSP+M EGNI +W KKEGD++  G+V+ EVETDKAT++ +  +  GYL
Sbjct:   71 SEILNKRSYSSKG-----KEITMPALSPSMTEGNIVQWKKKEGDQIKAGDVIAEVETDKATMDFQYEDGNGYL 138          

HSP 2 Score: 68.9366 bits (167), Expect = 2.709e-11
Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 3
Query:  507 PPHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECME-EGYL 677
            P H+ +GMP+LSP+M+ G IA W KKEGD++  G+ + EVETDKAT++ +  +  GYL
Sbjct:  204 PAHKVVGMPALSPSMETGGIASWTKKEGDQIKAGDAIAEVETDKATMDFQYEDGNGYL 261          
BLAST of DN621534 vs. ExPASy Swiss-Prot
Match: ODP2_ZYMMO (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Zymomonas mobilis GN=pdhC PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.622e-11
Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 3
Query:  519 EIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 677
            E+ MP+LSPTM EG +A+WL KEGD V  G++L E+ETDKA +E E ++ G +
Sbjct:    4 EVKMPALSPTMTEGTLAKWLVKEGDAVKAGDILAEIETDKAIMEFETVDAGII 56          
The following BLAST results are available for this feature:
BLAST of DN621534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
ODPX_MOUSE4.180e-1260.00Pyruvate dehydrogenase protein X component, mitoch... [more]
ODP2_DICDI1.216e-1149.32Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_ZYMMO4.622e-1154.72Dihydrolipoyllysine-residue acetyltransferase comp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N13_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621534 ID=DN621534; Name=DN621534; organism=Citrus sinensis; type=EST; length=677bp
ACGTTTTTAACCAAACTAAATCAGACCCTCTTTGATTCCTACTCTGTTCG
TTCATCTCTCACTAAAAAAGCAATTTAAAAAAAAAAAAACTATTTTTCTT
GCTGAATTTTCATTGCTCTTTTTCTGTTGATTTTTTTTAGTGGTTTTTGG
AAATATTAGTCATGGCGTATGCATCTCACATCATCAATCACTCTAAAAAG
TTGAAGAATGTTTCAAATTTGCTGCGGCATGAGAATGCTGTTTTGGTTCG
TTGGTTTTCAAATGATGCTGTTAGTAGCAGGGATGATCTTCTAAAGATTC
ATCGCCATGTCTATGTGCCTGTGGAGAGTGAAAGAGTCATTAATTCATCC
GCCATTAGCTCTGTATCATCAGTAGGTGTATTTAAGAAAAAAATTTCTAG
TGTGGCAAGAAAAGCCGGAAGTCCCATTGCTGGATCTTTCCTTAACAGAG
GATTTGCATGTTCAAAAGTACAATTGAAGAGAGGATTTTCGTCAGATTCA
GGTCTTCCTCCACACCAGGAGATTGGAATGCCCTCCCTTTCACCCACAAT
GCAAGAGGGTAATATTGCTCGGTGGTTGAAGAAAGAGGGCGACAAGGTGT
CTCCCGGTGAAGTACTCTGTGAAGTTGAAACTGATAAAGCAACTGTTGAG
ATGGAATGTATGGAGGAAGGTTATCTT
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