DN621525
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621525 vs. ExPASy Swiss-Prot
Match: ARFK_ORYSI (Auxin response factor 11 OS=Oryza sativa subsp. indica GN=ARF11 PE=2 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 2.677e-31 Identity = 64/103 (62.14%), Postives = 78/103 (75.73%), Query Frame = -3 Query: 303 VNPPNRTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLN 611 + PP RT+ KV K GS GRS+D+T F +YHELRS +A MFGL+G LE P S W+LV+VD ENDVLL+GD PW EF+N V CI+ILSP EVQQM + G +LN Sbjct: 847 MKPPVRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGMHVLN 949
BLAST of DN621525 vs. ExPASy Swiss-Prot
Match: ARFE_ORYSJ (Auxin response factor 5 OS=Oryza sativa subsp. japonica GN=ARF5 PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 2.960e-30 Identity = 65/108 (60.19%), Postives = 79/108 (73.15%), Query Frame = -3 Query: 273 RTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNS 596 RTF KVYK G+ GRS+DI ++S Y EL+ LARMFG+EG LED R GW+LV+ D E+D+LLLGD PW EFVN V CI+ILSP EVQQM G+ N +P Q S+S Sbjct: 1009 RTFTKVYKRGAVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDGDLGSNVLPNQACSSS 1116
BLAST of DN621525 vs. ExPASy Swiss-Prot
Match: ARFS_ORYSJ (Auxin response factor 19 OS=Oryza sativa subsp. japonica GN=ARF19 PE=2 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 3.866e-30 Identity = 69/129 (53.49%), Postives = 88/129 (68.22%), Query Frame = -3 Query: 222 RTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNSSCDDYATR----QDSRNLSAG 596 RTF KVYK G+ GRS+D+++FS Y EL+ LARMF +EG LE+ R GW+LV+ D E+D+LLLGD PW EFV V CI+ILSP EVQQM G +L N++P + +SS A R Q+S N S G Sbjct: 1027 RTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCDLGNNIPPNQACSSSDGGNAWRARCDQNSGNPSNG 1155
BLAST of DN621525 vs. ExPASy Swiss-Prot
Match: ARFE_ARATH (Auxin response factor 5 OS=Arabidopsis thaliana GN=ARF5 PE=1 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 6.595e-30 Identity = 65/111 (58.56%), Postives = 78/111 (70.27%), Query Frame = -3 Query: 273 PPNRTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNS 605 P RT+ KV K+GS GRS+D+T F Y EL+S + MFGLEG L P SGW+LV+VD E+DVLL+GD PW EFV V CI+ILSP EVQQM + G +LLNS I L S Sbjct: 790 PRVRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSAGINDLKTS 900
BLAST of DN621525 vs. ExPASy Swiss-Prot
Match: ARFS_ARATH (Auxin response factor 19 OS=Arabidopsis thaliana GN=ARF19 PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 4.275e-29 Identity = 64/112 (57.14%), Postives = 81/112 (72.32%), Query Frame = -3 Query: 261 RTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNSSCDD 596 RT+ KV K GS GRS+D+T++S Y ELR +LARMFG+EG LEDPL S W+LV+ D END+LL+GD PW EFVN V IKILS EVQQM G+ L ++P +N +C + Sbjct: 958 RTYTKVQKRGSVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQMSLDGD--LAAIP---TTNQACSE 1064
BLAST of DN621525 vs. ExPASy Swiss-Prot
Match: ARFP_ORYSJ (Auxin response factor 16 OS=Oryza sativa subsp. japonica GN=ARF16 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.624e-28 Identity = 65/112 (58.04%), Postives = 78/112 (69.64%), Query Frame = -3 Query: 261 RTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNSSCDD 596 RTF KV K GS GRS+DIT++ Y ELR +LA MFG++G LEDP R W+LV+VD END+LL+GD PW EFV V IKILS EVQQM G+ L VP Q + S+ DD Sbjct: 940 RTFTKVQKRGSVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDILLVGDDPWEEFVGCVKSIKILSAAEVQQMSLDGD--LGGVPPQTQACSASDD 1049
BLAST of DN621525 vs. ExPASy Swiss-Prot
Match: ARFP_ORYSI (Auxin response factor 16 OS=Oryza sativa subsp. indica GN=ARF16 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.624e-28 Identity = 65/112 (58.04%), Postives = 78/112 (69.64%), Query Frame = -3 Query: 261 RTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNSSCDD 596 RTF KV K GS GRS+DIT++ Y ELR +LA MFG++G LEDP R W+LV+VD END+LL+GD PW EFV V IKILS EVQQM G+ L VP Q + S+ DD Sbjct: 940 RTFTKVQKRGSVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDILLVGDDPWEEFVGCVKSIKILSAAEVQQMSLDGD--LGGVPPQTQACSASDD 1049
BLAST of DN621525 vs. ExPASy Swiss-Prot
Match: ARFG_ARATH (Auxin response factor 7 OS=Arabidopsis thaliana GN=ARF7 PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.121e-28 Identity = 63/110 (57.27%), Postives = 77/110 (70.00%), Query Frame = -3 Query: 267 RTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNSSC 596 RT+ KV K GS GRS+D+ ++ Y ELR +LARMFG+EG LEDP S W+LV+VD END+LL+GD PW EFVN V IKILS EVQQM GN VP+ +N +C Sbjct: 1037 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGN--FAGVPV---TNQAC 1141
BLAST of DN621525 vs. ExPASy Swiss-Prot
Match: ARFU_ORYSJ (Auxin response factor 21 OS=Oryza sativa subsp. japonica GN=ARF21 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 6.387e-25 Identity = 57/115 (49.57%), Postives = 77/115 (66.96%), Query Frame = -3 Query: 273 GQVNPPNRTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNS 617 G + RT+ KV+K G+ GRS+DI ++S Y EL+ ++ARMFG+EG L D R GW+LV+ D E DVLL+GD PW +FV V CI+ILSP E QM G+ + +P Q S+S Sbjct: 991 GPAHQRMRTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFGDSFLPNQACSSS 1105
BLAST of DN621525 vs. ExPASy Swiss-Prot
Match: ARFD_ORYSJ (Auxin response factor 4 OS=Oryza sativa subsp. japonica GN=ARF4 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.078e-16 Identity = 42/95 (44.21%), Postives = 64/95 (67.37%), Query Frame = -3 Query: 315 RTFVKVYKSG-SFGRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPPEVQQMGKRGN 596 R+ KV+K G + GRS+D++KFS+Y EL++EL +MF +G L ++ WQ+V+ D E D++L+GD PW EF + V I I + EVQ+M + N Sbjct: 692 RSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGELVSSNKN-WQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSN 785 The following BLAST results are available for this feature:
BLAST of DN621525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621525 ID=DN621525; Name=DN621525; organism=Citrus sinensis; type=EST; length=631bpback to top |